Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07035

Experiment: Stem-Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Atlantic
1,455,745	+				-0.3
1,455,746	-				-1.5
1,455,810	+		DZA65_RS07030	0.15	-2.3
1,455,810	+		DZA65_RS07030	0.15	-1.1
1,455,810	+		DZA65_RS07030	0.15	-2.9
1,455,811	-		DZA65_RS07030	0.15	+0.2
1,455,957	+		DZA65_RS07030	0.30	-2.1
1,455,957	+		DZA65_RS07030	0.30	-1.5
1,456,006	+		DZA65_RS07030	0.35	-0.6
1,456,007	-		DZA65_RS07030	0.35	+0.1
1,456,027	+		DZA65_RS07030	0.37	+0.3
1,456,119	+		DZA65_RS07030	0.46	-0.3
1,456,119	+		DZA65_RS07030	0.46	+0.3
1,456,119	+		DZA65_RS07030	0.46	+0.7
1,456,119	+		DZA65_RS07030	0.46	-1.6
1,456,119	+		DZA65_RS07030	0.46	-2.3
1,456,119	+				-2.1
1,456,120	-		DZA65_RS07030	0.46	+0.1
1,456,120	-		DZA65_RS07030	0.46	-1.6
1,456,120	-		DZA65_RS07030	0.46	-0.6
1,456,120	-		DZA65_RS07030	0.46	+3.0
1,456,206	+		DZA65_RS07030	0.55	+0.6
1,456,230	+		DZA65_RS07030	0.57	-0.3
1,456,230	+		DZA65_RS07030	0.57	-1.9
1,456,230	+		DZA65_RS07030	0.57	+0.1
1,456,231	-		DZA65_RS07030	0.57	+0.7
1,456,338	-		DZA65_RS07030	0.68	+0.4
1,456,386	+		DZA65_RS07030	0.73	+2.4
1,456,386	+		DZA65_RS07030	0.73	-0.9
1,456,387	-		DZA65_RS07030	0.73	+1.9
1,456,387	-		DZA65_RS07030	0.73	-0.9
1,456,387	-		DZA65_RS07030	0.73	-1.2
1,456,388	+		DZA65_RS07030	0.73	-0.9
1,456,389	-		DZA65_RS07030	0.73	-0.3
1,456,560	+				-0.6
1,456,561	-				+0.3
1,456,671	+				-0.0
1,456,671	+				+0.3
1,456,671	+				+0.8
1,456,671	+				-0.6
1,456,671	+				-0.9
1,456,671	+				-1.3
1,456,671	+				+2.3
1,456,671	+				+0.5
1,456,671	+				+0.1
1,456,672	-				+0.0
1,456,672	-				-0.3
1,456,672	-				+1.5
1,456,672	-				-1.3
1,456,769	+				-0.4
1,456,769	+				+0.4
1,456,770	-				+2.1
1,456,770	-				-0.3
1,456,781	+				+1.4
1,456,781	+				+0.6
1,456,781	+				-1.3
1,456,781	+				+2.1
1,456,781	+				-1.0
1,456,781	+				+0.0
1,456,782	-				-2.0
1,456,782	-				+1.3
1,456,782	-				-1.6
1,456,782	-				-1.3
1,456,782	-				-1.6
1,456,782	-				+1.7
1,456,782	-				-2.1
1,456,782	-				+0.7
1,456,785	+				+0.7
1,456,785	+				-0.1
1,456,785	+				+1.1
1,456,785	+				+0.7
1,456,786	-				-0.5
1,456,786	-				+1.8
1,456,786	-				+0.1
1,456,786	-				-0.3
1,456,786	-				+1.9
1,456,786	-				+0.8
1,456,786	-				-0.1
1,456,786	-				-0.9
1,456,788	+				+1.0
1,456,788	+				+0.3
1,456,789	-				-0.3
1,456,825	+				+1.4
1,456,922	+		DZA65_RS07035	0.15	-0.6
1,456,923	-		DZA65_RS07035	0.15	-1.3
1,456,923	-		DZA65_RS07035	0.15	+0.1
1,456,946	+		DZA65_RS07035	0.17	-0.5
1,456,947	-		DZA65_RS07035	0.17	-0.2
1,456,947	-		DZA65_RS07035	0.17	+1.1
1,456,971	+		DZA65_RS07035	0.19	-0.3
1,456,972	-		DZA65_RS07035	0.19	+1.8
1,456,972	-		DZA65_RS07035	0.19	-1.9
1,457,036	+		DZA65_RS07035	0.24	+1.7
1,457,036	+		DZA65_RS07035	0.24	+0.5
1,457,037	-		DZA65_RS07035	0.24	+0.9
1,457,037	-		DZA65_RS07035	0.24	+0.9
1,457,346	-		DZA65_RS07035	0.49	-0.9
1,457,430	+		DZA65_RS07035	0.56	+1.7
1,457,498	+		DZA65_RS07035	0.61	+0.6
1,457,498	+		DZA65_RS07035	0.61	+0.1
1,457,498	+		DZA65_RS07035	0.61	+0.7
1,457,499	-		DZA65_RS07035	0.61	+2.3
1,457,519	+		DZA65_RS07035	0.63	+0.0
1,457,519	+		DZA65_RS07035	0.63	+0.9
1,457,519	+		DZA65_RS07035	0.63	+0.7
1,457,519	+		DZA65_RS07035	0.63	+0.6
1,457,554	+		DZA65_RS07035	0.66	-0.1
1,457,592	+		DZA65_RS07035	0.69	-2.1
1,457,592	+		DZA65_RS07035	0.69	+2.7
1,457,592	+		DZA65_RS07035	0.69	+0.5
1,457,592	+		DZA65_RS07035	0.69	-0.9
1,457,669	+		DZA65_RS07035	0.75	-1.3
1,457,670	-		DZA65_RS07035	0.75	-0.3
1,457,670	-		DZA65_RS07035	0.75	-0.6
1,457,672	+		DZA65_RS07035	0.75	+0.8
1,457,673	-		DZA65_RS07035	0.75	-0.2
1,457,673	-		DZA65_RS07035	0.75	-0.9
1,457,862	+				-0.9
1,457,862	+				+1.7
1,457,863	-				+1.7
1,457,863	-				-0.3
1,457,863	-				-1.5
1,457,864	+				-0.7
1,457,864	+				-3.3
1,457,864	+				-1.9
1,457,864	+				-1.3
1,457,864	+				-0.3
1,457,864	+				-0.3
1,457,864	+				+1.7
1,457,865	-				-1.3
1,457,865	-				+0.9
1,457,865	-				-0.5
1,457,865	-				+0.6
1,457,894	-				+0.4
1,457,932	+				+0.2
1,457,951	+				-0.7
1,457,952	-				-0.7
1,457,984	+				+0.6
1,457,984	+				+1.4
1,457,984	+				-1.2
1,457,984	+				+0.6
1,457,984	+				+0.4
1,457,985	-				-2.1
1,458,048	+				-0.0
1,458,048	+				-1.9
1,458,162	-		DZA65_RS07040	0.14	+0.8
1,458,162	-		DZA65_RS07040	0.14	-0.9
1,458,187	+		DZA65_RS07040	0.17	-1.9
1,458,188	-		DZA65_RS07040	0.17	-0.6
1,458,264	+		DZA65_RS07040	0.24	-1.3
1,458,265	-		DZA65_RS07040	0.24	-0.8
1,458,303	+		DZA65_RS07040	0.27	-1.3
1,458,303	+		DZA65_RS07040	0.27	+1.0
1,458,304	-		DZA65_RS07040	0.28	-0.8
1,458,314	+		DZA65_RS07040	0.29	+0.4
1,458,315	-		DZA65_RS07040	0.29	-2.6
1,458,315	-		DZA65_RS07040	0.29	+0.1
1,458,315	-		DZA65_RS07040	0.29	-0.1
1,458,356	+		DZA65_RS07040	0.32	+2.0
1,458,356	+		DZA65_RS07040	0.32	+1.0
1,458,356	+		DZA65_RS07040	0.32	-1.3
1,458,356	+		DZA65_RS07040	0.32	+0.0
1,458,356	+		DZA65_RS07040	0.32	+0.3
1,458,356	+		DZA65_RS07040	0.32	-0.4
1,458,357	-		DZA65_RS07040	0.32	-0.2
1,458,357	-		DZA65_RS07040	0.32	-0.3
1,458,357	-		DZA65_RS07040	0.32	+0.4
1,458,357	-		DZA65_RS07040	0.32	-1.5
1,458,442	-		DZA65_RS07040	0.40	-1.4
1,458,442	-		DZA65_RS07040	0.40	+0.4
1,458,510	+		DZA65_RS07040	0.47	-2.6
1,458,510	+		DZA65_RS07040	0.47	-0.0
1,458,530	+		DZA65_RS07040	0.49	+1.0
1,458,530	+		DZA65_RS07040	0.49	+0.4
1,458,696	+		DZA65_RS07040	0.64	+0.2
1,458,697	-		DZA65_RS07040	0.64	-1.3
1,458,756	-		DZA65_RS07040	0.70	+1.0
1,458,791	+		DZA65_RS07040	0.73	+0.7
1,458,791	+		DZA65_RS07040	0.73	-2.3
1,458,792	-		DZA65_RS07040	0.73	+0.4
1,458,792	-		DZA65_RS07040	0.73	-1.3
1,458,792	-		DZA65_RS07040	0.73	+0.3
1,458,792	-		DZA65_RS07040	0.73	+0.0
1,458,792	-		DZA65_RS07040	0.73	+0.1