Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11775

Experiment: Stem-Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Atlantic
2,511,693	-		DZA65_RS11765	0.75	-1.3
2,511,729	+		DZA65_RS11765	0.78	+0.6
2,511,959	-				-0.8
2,511,961	+				-0.8
2,511,961	+				+2.1
2,511,988	+				+1.1
2,512,123	+				-0.0
2,512,124	-				+0.2
2,512,124	-				+1.6
2,512,179	-		DZA65_RS11770	0.24	+0.6
2,512,187	-		DZA65_RS11770	0.26	-0.0
2,512,187	-		DZA65_RS11770	0.26	+1.4
2,512,187	-		DZA65_RS11770	0.26	+1.0
2,512,187	-		DZA65_RS11770	0.26	-0.4
2,512,187	-		DZA65_RS11770	0.26	+0.2
2,512,189	+		DZA65_RS11770	0.27	-0.2
2,512,189	+		DZA65_RS11770	0.27	+0.2
2,512,190	-				-1.6
2,512,190	-		DZA65_RS11770	0.27	-2.6
2,512,222	+		DZA65_RS11770	0.37	+0.7
2,512,222	+		DZA65_RS11770	0.37	-0.3
2,512,222	+		DZA65_RS11770	0.37	+1.3
2,512,222	+		DZA65_RS11770	0.37	+0.5
2,512,222	+		DZA65_RS11770	0.37	+0.6
2,512,222	+		DZA65_RS11770	0.37	-0.8
2,512,222	+		DZA65_RS11770	0.37	-1.6
2,512,222	+		DZA65_RS11770	0.37	+0.8
2,512,222	+		DZA65_RS11770	0.37	-0.1
2,512,223	-		DZA65_RS11770	0.37	-1.4
2,512,223	-		DZA65_RS11770	0.37	+0.6
2,512,223	-		DZA65_RS11770	0.37	-0.0
2,512,223	-		DZA65_RS11770	0.37	+0.8
2,512,223	-		DZA65_RS11770	0.37	+0.0
2,512,226	+		DZA65_RS11770	0.38	+0.6
2,512,226	+		DZA65_RS11770	0.38	-1.8
2,512,226	+		DZA65_RS11770	0.38	+1.3
2,512,226	+		DZA65_RS11770	0.38	+1.1
2,512,226	+		DZA65_RS11770	0.38	+0.3
2,512,226	+		DZA65_RS11770	0.38	+0.0
2,512,226	+		DZA65_RS11770	0.38	+0.3
2,512,226	+		DZA65_RS11770	0.38	+0.3
2,512,226	+		DZA65_RS11770	0.38	-0.2
2,512,226	+		DZA65_RS11770	0.38	-1.4
2,512,226	+		DZA65_RS11770	0.38	+0.7
2,512,227	-		DZA65_RS11770	0.38	+0.5
2,512,227	-		DZA65_RS11770	0.38	-0.2
2,512,227	-		DZA65_RS11770	0.38	-0.3
2,512,227	-		DZA65_RS11770	0.38	-0.8
2,512,227	-		DZA65_RS11770	0.38	-0.8
2,512,227	-		DZA65_RS11770	0.38	+0.6
2,512,227	-		DZA65_RS11770	0.38	+0.2
2,512,227	-		DZA65_RS11770	0.38	+0.0
2,512,230	-		DZA65_RS11770	0.39	-0.1
2,512,230	-		DZA65_RS11770	0.39	+0.2
2,512,317	+		DZA65_RS11770	0.65	-0.9
2,512,363	+		DZA65_RS11770	0.79	+0.4
2,512,363	+		DZA65_RS11770	0.79	-0.2
2,512,364	-		DZA65_RS11770	0.80	-0.6
2,512,403	+				-0.2
2,512,403	+				-0.3
2,512,404	-				-1.8
2,512,436	-				+1.6
2,512,461	-				-0.0
2,512,466	+				+0.0
2,512,466	+				+0.1
2,512,467	+				-0.5
2,512,467	-				+0.3
2,512,467	-				+0.3
2,512,470	+				+0.6
2,512,470	+				-1.3
2,512,470	+				+0.3
2,512,471	-				+0.4
2,512,471	-				-0.4
2,512,471	-				-0.8
2,512,471	-				-0.1
2,512,518	+				-1.4
2,512,518	+				+0.8
2,512,518	+				-0.4
2,512,519	-				+0.8
2,512,547	+				-1.0
2,512,626	+				-0.4
2,512,635	-				-1.0
2,513,527	+				-1.4
2,513,527	+				-0.4
2,513,527	+				+1.0
2,513,527	+				+0.9
2,513,527	+				+0.4
2,513,527	+				-2.8
2,513,528	-				-1.0
2,513,528	-				+0.9
2,513,528	-				-1.4
2,513,532	+				-1.8
2,513,532	+				-0.8
2,513,532	+				-1.0
2,513,532	+				-0.2
2,513,533	-				+1.8
2,513,533	-				-1.0
2,513,533	-				-0.0
2,513,533	-				+0.2
2,513,533	-				-0.4
2,513,533	-				+0.7
2,513,538	+				+1.6
2,513,538	+				+0.6
2,513,538	+				+0.1
2,513,539	-				-0.2
2,513,539	-				-0.8
2,513,539	-				+0.4
2,513,539	-				+0.6
2,513,539	-				-0.4
2,513,539	-				+0.8
2,513,540	+				+0.8
2,513,540	+				+0.1
2,513,552	+				-0.2
2,513,552	+				-1.0
2,513,552	+				+1.9
2,513,552	+				+0.4
2,513,552	+				+1.0
2,513,552	+				+2.1
2,513,553	-				+0.6
2,513,553	-				+1.0
2,513,553	-				+0.9
2,513,553	-				+0.1
2,513,553	-				-0.5
2,513,553	-				+0.6
2,513,561	-				+1.6
2,513,572	+				-1.4
2,513,572	+				+0.6
2,513,572	+				+0.8
2,513,572	+				+1.1
2,513,572	+				+0.6
2,513,572	+				-0.6
2,513,572	+				+1.0
2,513,573	-				-0.2
2,513,573	-				-0.4
2,513,573	-				+0.6
2,513,573	-				-1.4
2,513,573	-				+1.3
2,513,573	-				+0.3
2,513,573	-				-0.4
2,513,573	-				+1.1
2,513,573	-				+0.9
2,513,655	-				-0.9
2,513,686	+				-0.8
2,513,686	+				+1.6
2,513,765	+		DZA65_RS11780	0.13	-1.8
2,513,765	+		DZA65_RS11780	0.13	-1.0
2,513,765	+		DZA65_RS11780	0.13	-1.0
2,513,766	-		DZA65_RS11780	0.13	+0.8
2,513,767	+		DZA65_RS11780	0.14	+2.8
2,513,767	+		DZA65_RS11780	0.14	-1.8
2,513,767	+		DZA65_RS11780	0.14	-1.4
2,513,768	-		DZA65_RS11780	0.14	+1.6
2,513,774	-		DZA65_RS11780	0.14	+0.7
2,513,787	+		DZA65_RS11780	0.16	-0.2
2,513,787	+		DZA65_RS11780	0.16	-0.7
2,513,788	-		DZA65_RS11780	0.16	+0.3
2,513,788	-		DZA65_RS11780	0.16	+0.1
2,513,794	-		DZA65_RS11780	0.17	+1.3
2,513,867	+		DZA65_RS11780	0.25	-0.3
2,513,942	+		DZA65_RS11780	0.33	+1.7
2,513,942	+		DZA65_RS11780	0.33	-0.2
2,513,942	+		DZA65_RS11780	0.33	+1.0
2,513,942	+		DZA65_RS11780	0.33	-1.3
2,513,942	+		DZA65_RS11780	0.33	+1.8
2,513,942	+		DZA65_RS11780	0.33	+0.8
2,513,942	+		DZA65_RS11780	0.33	-0.4
2,513,942	+		DZA65_RS11780	0.33	+0.1
2,513,942	+		DZA65_RS11780	0.33	+0.4
2,513,942	+		DZA65_RS11780	0.33	-0.0
2,513,943	-		DZA65_RS11780	0.33	-1.0
2,513,943	-		DZA65_RS11780	0.33	-0.8
2,513,943	-		DZA65_RS11780	0.33	+0.1
2,513,943	-		DZA65_RS11780	0.33	-2.3
2,513,943	-		DZA65_RS11780	0.33	+1.4
2,513,943	-		DZA65_RS11780	0.33	-1.8
2,513,943	-		DZA65_RS11780	0.33	-1.0
2,513,943	-		DZA65_RS11780	0.33	-0.3
2,513,943	-		DZA65_RS11780	0.33	+0.6
2,513,943	-		DZA65_RS11780	0.33	-0.7
2,513,946	+		DZA65_RS11780	0.33	-1.8
2,513,947	-		DZA65_RS11780	0.33	+1.0
2,513,947	-		DZA65_RS11780	0.33	-1.4
2,513,947	-		DZA65_RS11780	0.33	+1.3
2,514,176	+		DZA65_RS11780	0.59	-1.6
2,514,176	+		DZA65_RS11780	0.59	-2.3
2,514,176	+		DZA65_RS11780	0.59	+2.1
2,514,177	-		DZA65_RS11780	0.59	-0.4
2,514,177	-		DZA65_RS11780	0.59	+0.6
2,514,177	-		DZA65_RS11780	0.59	-0.8
2,514,177	-		DZA65_RS11780	0.59	+0.6
2,514,177	-		DZA65_RS11780	0.59	-0.7
2,514,186	+		DZA65_RS11780	0.60	+0.6
2,514,186	+		DZA65_RS11780	0.60	+0.6
2,514,187	-		DZA65_RS11780	0.60	+0.6
2,514,187	-		DZA65_RS11780	0.60	+2.0
2,514,187	-		DZA65_RS11780	0.60	-1.2
2,514,217	+		DZA65_RS11780	0.63	-1.3
2,514,235	+		DZA65_RS11780	0.65	-0.3
2,514,263	+		DZA65_RS11780	0.68	-0.4
2,514,263	+		DZA65_RS11780	0.68	+0.7
2,514,264	-		DZA65_RS11780	0.69	-1.8
2,514,350	+		DZA65_RS11780	0.78	-1.3
2,514,393	+		DZA65_RS11780	0.83	-0.9
2,514,394	-		DZA65_RS11780	0.83	+0.3
2,514,411	-		DZA65_RS11780	0.85	-0.4
2,514,416	-		DZA65_RS11780	0.85	+0.1
2,514,466	+				-1.8
2,514,466	+				+0.6
2,514,467	-				+0.1