Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22695

Experiment: Stem-Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Atlantic
4,903,448	-		DZA65_RS22685	0.29	+0.9
4,903,470	+		DZA65_RS22685	0.31	-0.7
4,903,470	+		DZA65_RS22685	0.31	+1.3
4,903,470	+		DZA65_RS22685	0.31	+0.3
4,903,470	+		DZA65_RS22685	0.31	+1.6
4,903,470	+		DZA65_RS22685	0.31	+0.6
4,903,470	+		DZA65_RS22685	0.31	-1.7
4,903,470	+		DZA65_RS22685	0.31	-1.4
4,903,470	+		DZA65_RS22685	0.31	+1.7
4,903,470	+		DZA65_RS22685	0.31	+0.5
4,903,470	+		DZA65_RS22685	0.31	+0.6
4,903,470	+		DZA65_RS22685	0.31	-0.0
4,903,470	+		DZA65_RS22685	0.31	+0.4
4,903,470	+		DZA65_RS22685	0.31	-0.3
4,903,470	+		DZA65_RS22685	0.31	-0.7
4,903,470	+		DZA65_RS22685	0.31	-3.2
4,903,471	-		DZA65_RS22685	0.32	-1.1
4,903,471	-		DZA65_RS22685	0.32	+0.5
4,903,471	-		DZA65_RS22685	0.32	-0.1
4,903,475	+		DZA65_RS22685	0.32	+0.5
4,903,475	+		DZA65_RS22685	0.32	+0.9
4,903,475	+		DZA65_RS22685	0.32	+0.1
4,903,475	+		DZA65_RS22685	0.32	-0.1
4,903,476	-		DZA65_RS22685	0.32	+1.6
4,903,476	-		DZA65_RS22685	0.32	-1.7
4,903,476	-		DZA65_RS22685	0.32	+1.3
4,903,476	-		DZA65_RS22685	0.32	-0.7
4,903,476	-		DZA65_RS22685	0.32	+0.5
4,903,487	-		DZA65_RS22685	0.33	-1.7
4,903,498	+		DZA65_RS22685	0.35	-1.7
4,903,498	+		DZA65_RS22685	0.35	+0.3
4,903,498	+		DZA65_RS22685	0.35	-1.4
4,903,513	+		DZA65_RS22685	0.36	+2.5
4,903,513	+		DZA65_RS22685	0.36	+0.1
4,903,514	-		DZA65_RS22685	0.36	+0.0
4,903,531	+		DZA65_RS22685	0.38	-1.9
4,903,531	+		DZA65_RS22685	0.38	+0.7
4,903,531	+		DZA65_RS22685	0.38	+0.2
4,903,532	-		DZA65_RS22685	0.38	+0.4
4,903,532	-		DZA65_RS22685	0.38	+1.2
4,903,532	-		DZA65_RS22685	0.38	-0.7
4,903,532	-		DZA65_RS22685	0.38	+1.9
4,903,532	-		DZA65_RS22685	0.38	-0.1
4,903,532	-		DZA65_RS22685	0.38	+2.6
4,903,532	-		DZA65_RS22685	0.38	+1.9
4,903,535	+		DZA65_RS22685	0.39	+0.9
4,903,535	+		DZA65_RS22685	0.39	+2.0
4,903,535	+		DZA65_RS22685	0.39	-1.1
4,903,535	+		DZA65_RS22685	0.39	+0.9
4,903,535	+		DZA65_RS22685	0.39	-0.1
4,903,535	+		DZA65_RS22685	0.39	-1.2
4,903,535	+		DZA65_RS22685	0.39	+0.4
4,903,535	+		DZA65_RS22685	0.39	+1.3
4,903,535	+		DZA65_RS22685	0.39	-0.4
4,903,535	+		DZA65_RS22685	0.39	-0.3
4,903,535	+		DZA65_RS22685	0.39	-2.2
4,903,535	+		DZA65_RS22685	0.39	-0.2
4,903,535	+		DZA65_RS22685	0.39	+1.4
4,903,535	+		DZA65_RS22685	0.39	-0.3
4,903,535	+		DZA65_RS22685	0.39	-0.1
4,903,535	+		DZA65_RS22685	0.39	-0.1
4,903,535	+		DZA65_RS22685	0.39	-1.6
4,903,536	-		DZA65_RS22685	0.39	-0.3
4,903,536	-		DZA65_RS22685	0.39	-0.4
4,903,536	-		DZA65_RS22685	0.39	-0.1
4,903,536	-		DZA65_RS22685	0.39	-1.1
4,903,536	-		DZA65_RS22685	0.39	-0.3
4,903,536	-		DZA65_RS22685	0.39	-0.3
4,903,536	-		DZA65_RS22685	0.39	+0.2
4,903,536	-		DZA65_RS22685	0.39	+0.1
4,903,536	-		DZA65_RS22685	0.39	-0.6
4,903,536	-		DZA65_RS22685	0.39	-0.9
4,903,536	-		DZA65_RS22685	0.39	+1.7
4,903,539	-		DZA65_RS22685	0.39	+0.2
4,903,539	-		DZA65_RS22685	0.39	-1.1
4,903,539	-		DZA65_RS22685	0.39	-0.0
4,903,552	+		DZA65_RS22685	0.41	-1.4
4,903,552	+		DZA65_RS22685	0.41	+0.3
4,903,552	+		DZA65_RS22685	0.41	-1.7
4,903,553	-		DZA65_RS22685	0.41	+0.2
4,903,553	-		DZA65_RS22685	0.41	+0.1
4,903,553	-		DZA65_RS22685	0.41	+0.6
4,903,553	-		DZA65_RS22685	0.41	+0.9
4,903,553	-		DZA65_RS22685	0.41	+0.9
4,903,553	-		DZA65_RS22685	0.41	-0.0
4,903,555	+		DZA65_RS22685	0.41	+0.3
4,903,555	+		DZA65_RS22685	0.41	+0.3
4,903,555	+		DZA65_RS22685	0.41	-0.4
4,903,555	+		DZA65_RS22685	0.41	+0.6
4,903,555	+		DZA65_RS22685	0.41	+0.5
4,903,555	+		DZA65_RS22685	0.41	-2.4
4,903,555	+		DZA65_RS22685	0.41	-1.4
4,903,555	+		DZA65_RS22685	0.41	-2.3
4,903,555	+		DZA65_RS22685	0.41	-1.3
4,903,555	+		DZA65_RS22685	0.41	+0.5
4,903,556	-		DZA65_RS22685	0.41	-1.7
4,903,556	-		DZA65_RS22685	0.41	-0.3
4,903,556	-		DZA65_RS22685	0.41	-1.2
4,903,556	-		DZA65_RS22685	0.41	-0.7
4,903,556	-		DZA65_RS22685	0.41	-0.0
4,903,556	-				-0.1
4,903,556	-		DZA65_RS22685	0.41	+0.6
4,903,557	+		DZA65_RS22685	0.41	+0.1
4,903,557	+		DZA65_RS22685	0.41	+0.8
4,903,557	+		DZA65_RS22685	0.41	-1.0
4,903,557	+		DZA65_RS22685	0.41	+1.7
4,903,557	+		DZA65_RS22685	0.41	-1.3
4,903,557	+		DZA65_RS22685	0.41	+1.5
4,903,557	+		DZA65_RS22685	0.41	+0.9
4,903,557	+		DZA65_RS22685	0.41	-1.1
4,903,557	+		DZA65_RS22685	0.41	-1.7
4,903,558	-		DZA65_RS22685	0.41	-0.3
4,903,558	-		DZA65_RS22685	0.41	+0.0
4,903,558	-		DZA65_RS22685	0.41	-1.7
4,903,558	-		DZA65_RS22685	0.41	-1.0
4,903,576	+		DZA65_RS22685	0.43	+1.0
4,903,576	+		DZA65_RS22685	0.43	+4.3
4,903,577	-		DZA65_RS22685	0.44	-1.1
4,903,588	+		DZA65_RS22685	0.45	+2.5
4,903,588	+		DZA65_RS22685	0.45	-1.3
4,903,588	+		DZA65_RS22685	0.45	+0.9
4,903,589	-		DZA65_RS22685	0.45	-0.4
4,903,589	-		DZA65_RS22685	0.45	-0.0
4,903,589	-		DZA65_RS22685	0.45	-1.2
4,903,589	-		DZA65_RS22685	0.45	-0.2
4,903,599	+		DZA65_RS22685	0.46	+0.1
4,903,643	+		DZA65_RS22685	0.51	-0.2
4,903,643	+		DZA65_RS22685	0.51	+1.2
4,903,643	+		DZA65_RS22685	0.51	+0.3
4,903,643	+		DZA65_RS22685	0.51	+0.9
4,903,655	+		DZA65_RS22685	0.52	-2.3
4,903,655	+		DZA65_RS22685	0.52	+0.8
4,903,655	+		DZA65_RS22685	0.52	+1.1
4,903,655	+		DZA65_RS22685	0.52	+0.2
4,903,655	+		DZA65_RS22685	0.52	-0.1
4,903,655	+		DZA65_RS22685	0.52	+0.2
4,903,656	-		DZA65_RS22685	0.52	-0.1
4,903,656	-		DZA65_RS22685	0.52	-1.2
4,903,656	-		DZA65_RS22685	0.52	+0.6
4,903,656	-		DZA65_RS22685	0.52	-1.1
4,903,686	-		DZA65_RS22685	0.56	-0.7
4,903,698	+		DZA65_RS22685	0.57	-1.1
4,903,698	+		DZA65_RS22685	0.57	+0.5
4,903,698	+		DZA65_RS22685	0.57	-0.3
4,903,698	+		DZA65_RS22685	0.57	+0.5
4,903,699	-		DZA65_RS22685	0.57	+0.9
4,903,699	-		DZA65_RS22685	0.57	+2.6
4,903,703	+		DZA65_RS22685	0.58	+0.7
4,903,735	+		DZA65_RS22685	0.61	-0.5
4,903,735	+		DZA65_RS22685	0.61	-0.1
4,903,735	+		DZA65_RS22685	0.61	-0.2
4,903,735	+		DZA65_RS22685	0.61	+0.5
4,903,736	-		DZA65_RS22685	0.62	-0.1
4,903,736	-		DZA65_RS22685	0.62	+0.2
4,903,736	-		DZA65_RS22685	0.62	-0.1
4,903,737	+		DZA65_RS22685	0.62	-0.9
4,903,737	+		DZA65_RS22685	0.62	+1.0
4,903,737	+		DZA65_RS22685	0.62	-1.1
4,903,737	+		DZA65_RS22685	0.62	+0.7
4,903,737	+		DZA65_RS22685	0.62	+0.5
4,903,737	+		DZA65_RS22685	0.62	-0.1
4,903,737	+		DZA65_RS22685	0.62	+0.2
4,903,738	-		DZA65_RS22685	0.62	+0.5
4,903,738	-		DZA65_RS22685	0.62	+0.6
4,903,738	-		DZA65_RS22685	0.62	-0.4
4,903,738	-		DZA65_RS22685	0.62	-0.5
4,903,738	-		DZA65_RS22685	0.62	+0.9
4,903,740	+		DZA65_RS22685	0.62	+0.9
4,903,740	+		DZA65_RS22685	0.62	-0.2
4,903,740	+		DZA65_RS22685	0.62	-0.7
4,903,740	+		DZA65_RS22685	0.62	+0.2
4,903,740	+		DZA65_RS22685	0.62	-2.1
4,903,740	+		DZA65_RS22685	0.62	-1.4
4,903,741	-		DZA65_RS22685	0.62	+1.9
4,903,741	-		DZA65_RS22685	0.62	+0.5
4,903,741	-		DZA65_RS22685	0.62	-0.1
4,903,741	-		DZA65_RS22685	0.62	-2.9
4,903,741	-		DZA65_RS22685	0.62	-0.8
4,903,741	-		DZA65_RS22685	0.62	+1.2
4,903,741	-		DZA65_RS22685	0.62	-0.8
4,903,741	-		DZA65_RS22685	0.62	+1.3
4,903,741	-		DZA65_RS22685	0.62	-0.5
4,903,741	-		DZA65_RS22685	0.62	-0.5
4,903,759	+		DZA65_RS22685	0.64	+0.7
4,903,760	-		DZA65_RS22685	0.64	-0.7
4,903,767	+		DZA65_RS22685	0.65	-0.1
4,903,768	-		DZA65_RS22685	0.65	+0.9
4,903,768	-		DZA65_RS22685	0.65	-0.4
4,903,768	-		DZA65_RS22685	0.65	-0.2
4,903,768	-		DZA65_RS22685	0.65	-0.4
4,903,803	+		DZA65_RS22685	0.69	-0.0
4,903,803	+		DZA65_RS22685	0.69	-1.4
4,903,803	+		DZA65_RS22685	0.69	+0.0
4,903,803	+		DZA65_RS22685	0.69	-0.3
4,903,803	+		DZA65_RS22685	0.69	+1.1
4,903,804	-		DZA65_RS22685	0.69	-0.8
4,903,804	-		DZA65_RS22685	0.69	+0.7
4,903,804	-		DZA65_RS22685	0.69	+1.1
4,903,804	-		DZA65_RS22685	0.69	-0.2
4,903,804	-		DZA65_RS22685	0.69	+0.0
4,903,804	-		DZA65_RS22685	0.69	+1.2
4,903,814	+		DZA65_RS22685	0.70	+0.9
4,903,814	+		DZA65_RS22685	0.70	-1.8
4,903,814	+		DZA65_RS22685	0.70	+0.6
4,903,815	-		DZA65_RS22685	0.71	-0.3
4,903,815	-		DZA65_RS22685	0.71	-0.9
4,903,815	-		DZA65_RS22685	0.71	-0.2
4,903,815	-		DZA65_RS22685	0.71	+0.7
4,903,815	-		DZA65_RS22685	0.71	-1.9
4,903,815	-		DZA65_RS22685	0.71	-1.6
4,903,815	-		DZA65_RS22685	0.71	-1.4
4,903,815	-		DZA65_RS22685	0.71	-0.7
4,903,905	+		DZA65_RS22685	0.81	-0.2
4,903,905	+		DZA65_RS22685	0.81	+2.3
4,903,906	-		DZA65_RS22685	0.81	-2.7
4,903,906	-		DZA65_RS22685	0.81	-1.1
4,903,909	+		DZA65_RS22685	0.81	-1.1
4,903,909	+		DZA65_RS22685	0.81	-0.7
4,903,909	+		DZA65_RS22685	0.81	+0.6
4,903,909	+		DZA65_RS22685	0.81	+0.7
4,903,909	+		DZA65_RS22685	0.81	+1.5
4,903,909	+		DZA65_RS22685	0.81	-1.2
4,903,909	+		DZA65_RS22685	0.81	-0.3
4,903,910	-		DZA65_RS22685	0.81	+1.6
4,903,910	-		DZA65_RS22685	0.81	-1.1
4,903,910	-				+0.9
4,903,910	-		DZA65_RS22685	0.81	+0.6
4,903,913	+		DZA65_RS22685	0.82	+1.3
4,903,913	+		DZA65_RS22685	0.82	+0.2
4,903,913	+				-0.1
4,903,913	+		DZA65_RS22685	0.82	-1.1
4,903,914	-		DZA65_RS22685	0.82	-0.4
4,903,914	-		DZA65_RS22685	0.82	-2.3
4,903,914	-		DZA65_RS22685	0.82	-0.4
4,903,914	-		DZA65_RS22685	0.82	+1.1
4,903,914	-		DZA65_RS22685	0.82	-1.4
4,903,914	-		DZA65_RS22685	0.82	-1.1
4,903,914	-		DZA65_RS22685	0.82	+1.6
4,903,914	-		DZA65_RS22685	0.82	+0.3
4,903,914	-		DZA65_RS22685	0.82	-0.3
4,903,918	-		DZA65_RS22685	0.82	-0.1
4,903,918	-		DZA65_RS22685	0.82	-0.1
4,903,936	+		DZA65_RS22685	0.84	+0.9
4,903,936	+		DZA65_RS22685	0.84	-0.1
4,903,937	-		DZA65_RS22685	0.84	-1.4
4,903,937	-		DZA65_RS22685	0.84	-1.2
4,903,993	+				+1.9
4,903,993	+				-0.1
4,903,993	+				-0.7
4,904,002	+				-0.2
4,904,043	+				+0.6
4,904,044	-				-1.0
4,904,044	-				-0.8
4,904,044	-				+0.3
4,904,044	-				+0.5
4,904,044	-				-0.1
4,904,055	+				-0.5
4,904,073	-				-1.7
4,904,092	+				+0.9
4,904,131	+				-0.3
4,904,131	+				-0.7
4,904,131	+				-1.4
4,904,131	+				+0.1
4,904,161	+				-0.1
4,904,166	+				-0.3
4,904,214	+		DZA65_RS22690	0.22	+0.1
4,904,214	+		DZA65_RS22690	0.22	-0.1
4,904,215	-		DZA65_RS22690	0.23	+0.1
4,904,285	+		DZA65_RS22690	0.57	-1.0
4,904,286	-		DZA65_RS22690	0.58	+0.6
4,904,348	+		DZA65_RS22690	0.88	-0.8
4,904,348	+				-0.7
4,904,358	-				+0.9
4,904,358	-				-0.7
4,904,382	-				+0.9
4,904,382	-				+2.0
4,904,382	-				+0.4
4,904,382	-				+0.5
4,904,397	+				+0.5
4,904,405	+				-0.7
4,904,406	-				+0.2
4,904,406	-				+0.4
4,904,422	+				+0.3
4,904,422	+				+1.1
4,904,422	+				-0.9
4,904,422	+				-1.3
4,904,422	+				+1.0
4,904,422	+				+3.1
4,904,422	+				+0.9
4,904,423	-				-1.4
4,904,426	+				-1.1
4,904,426	+				-1.2
4,904,426	+				-1.7
4,904,426	+				-1.1
4,904,426	+				-0.7
4,904,426	+				-1.0
4,904,426	+				-0.5
4,904,426	+				-1.4
4,904,426	+				-0.1
4,904,426	+				-0.7
4,904,426	+				+0.4
4,904,426	+				-0.8
4,904,426	+				+0.2
4,904,426	+				-0.5
4,904,426	+				+0.2
4,904,427	-				+0.5
4,904,427	-				-1.9
4,904,427	-				+0.4
4,904,427	-				-0.6
4,904,427	-				-1.1
4,904,427	-				+0.2
4,904,427	-				+0.7
4,904,427	-				+0.3
4,904,427	-				-0.5
4,904,431	+				-1.3
4,904,431	+				-0.8
4,904,431	+				+0.7
4,904,431	+				-0.2
4,904,431	+				-0.1
4,904,432	-				+0.4
4,904,432	-				+0.2
4,904,432	-				+1.2
4,904,432	-				-1.1
4,904,432	-				-1.4
4,904,432	-				+0.2
4,904,432	-				+0.9
4,904,510	+				-0.4
4,904,559	+				+0.0
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4,904,665	+		DZA65_RS22695	0.17	-0.7
4,904,666	-		DZA65_RS22695	0.17	-1.3
4,904,705	+		DZA65_RS22695	0.20	-1.5
4,904,705	+		DZA65_RS22695	0.20	-1.3
4,904,706	-		DZA65_RS22695	0.20	-2.1
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4,904,737	+		DZA65_RS22695	0.22	-0.1
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4,904,749	+		DZA65_RS22695	0.23	-0.1
4,904,749	+		DZA65_RS22695	0.23	+0.3
4,904,749	+		DZA65_RS22695	0.23	-0.7
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4,904,854	+		DZA65_RS22695	0.31	+0.5
4,904,903	+		DZA65_RS22695	0.34	+0.9
4,904,945	-		DZA65_RS22695	0.37	+0.4
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4,904,958	-		DZA65_RS22695	0.38	-0.9
4,904,998	+		DZA65_RS22695	0.41	-1.4
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4,905,026	-		DZA65_RS22695	0.43	-2.7
4,905,038	+		DZA65_RS22695	0.44	+1.2
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4,905,038	+		DZA65_RS22695	0.44	+0.0
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4,905,294	+		DZA65_RS22695	0.63	-0.0
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4,905,295	-		DZA65_RS22695	0.63	-0.4
4,905,295	-				-1.7
4,905,295	-		DZA65_RS22695	0.63	-0.1
4,905,301	+		DZA65_RS22695	0.63	+1.2
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4,905,657	+		DZA65_RS22695	0.90	+0.9
4,905,658	-		DZA65_RS22695	0.90	+2.2
4,905,667	-				+0.9
4,905,739	+				-1.4
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4,905,739	+				+0.5
4,905,740	-				-0.7
4,905,743	+				-1.1
4,905,744	-				+0.3
4,905,852	+				+0.1
4,905,852	+				-1.7
4,905,853	-				+0.6
4,905,853	-				+0.3
4,905,915	+				-1.6
4,905,915	+				+0.9