Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13810

Experiment: Stem-Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Atlantic
2,963,423	-		DZA65_RS13800	0.63	-0.5
2,963,423	-		DZA65_RS13800	0.63	-0.1
2,963,427	-		DZA65_RS13800	0.63	-0.5
2,963,427	-		DZA65_RS13800	0.63	+0.1
2,963,517	+		DZA65_RS13800	0.77	+0.0
2,963,517	+		DZA65_RS13800	0.77	-0.7
2,963,518	-		DZA65_RS13800	0.78	-0.7
2,963,518	-		DZA65_RS13800	0.78	-2.3
2,963,518	-		DZA65_RS13800	0.78	-0.5
2,963,539	+		DZA65_RS13800	0.81	-0.2
2,963,539	+		DZA65_RS13800	0.81	+1.0
2,963,540	-		DZA65_RS13800	0.81	-1.8
2,963,540	-		DZA65_RS13800	0.81	-1.8
2,963,598	+				-0.4
2,963,598	+				-0.7
2,963,599	-				-0.1
2,963,677	+				+0.9
2,963,678	-				-1.5
2,963,778	+				+0.5
2,963,778	+				+0.5
2,963,779	-				-1.1
2,963,781	+				-0.8
2,963,781	+				-2.1
2,963,781	+				+0.2
2,963,782	-				-1.8
2,963,807	+				-0.1
2,963,809	+				+0.5
2,963,809	+				-0.1
2,963,809	+				+1.8
2,963,810	-				-0.8
2,963,810	-				+0.2
2,963,810	-				+0.3
2,963,956	+				+0.5
2,963,956	+				+1.8
2,963,957	-				-0.8
2,963,993	-				-0.5
2,964,097	-				+1.2
2,964,099	-				-0.7
2,964,116	-				-2.5
2,964,123	-				-1.4
2,964,123	-				-0.5
2,964,123	-				+0.8
2,964,123	-				+1.1
2,964,127	-				-0.3
2,964,218	-				+1.3
2,964,230	+				+0.9
2,964,233	-				-0.3
2,964,288	+				-1.1
2,964,288	+				+0.4
2,964,308	+				-0.2
2,964,326	-				-1.4
2,964,340	-				-1.4
2,964,430	+				-1.1
2,964,430	+				-0.3
2,964,431	-				-0.2
2,964,491	+				+0.1
2,964,491	+				+0.3
2,964,492	-				+0.0
2,964,512	+				+0.7
2,964,552	-		DZA65_RS13810	0.11	-0.5
2,964,552	-		DZA65_RS13810	0.11	-0.8
2,964,567	-		DZA65_RS13810	0.12	+0.5
2,964,599	+		DZA65_RS13810	0.14	+0.1
2,964,600	-		DZA65_RS13810	0.14	-0.1
2,964,600	-		DZA65_RS13810	0.14	-1.1
2,964,605	-		DZA65_RS13810	0.15	-0.5
2,964,605	-		DZA65_RS13810	0.15	-0.2
2,964,655	+		DZA65_RS13810	0.18	-0.5
2,964,655	+		DZA65_RS13810	0.18	-0.7
2,964,656	-		DZA65_RS13810	0.18	+0.7
2,964,657	+		DZA65_RS13810	0.18	-0.2
2,964,659	+		DZA65_RS13810	0.18	+0.5
2,964,659	+		DZA65_RS13810	0.18	-0.1
2,964,659	+		DZA65_RS13810	0.18	-0.2
2,964,689	+		DZA65_RS13810	0.20	-1.1
2,964,689	+		DZA65_RS13810	0.20	+0.4
2,964,691	+		DZA65_RS13810	0.20	+0.5
2,964,691	+		DZA65_RS13810	0.20	+1.2
2,964,691	+		DZA65_RS13810	0.20	-0.5
2,964,691	+		DZA65_RS13810	0.20	+1.4
2,964,691	+		DZA65_RS13810	0.20	+0.5
2,964,691	+		DZA65_RS13810	0.20	-0.1
2,964,691	+		DZA65_RS13810	0.20	+0.8
2,964,692	-		DZA65_RS13810	0.20	-1.3
2,964,707	+		DZA65_RS13810	0.21	+1.1
2,964,717	+		DZA65_RS13810	0.22	-1.2
2,964,746	+		DZA65_RS13810	0.23	-1.3
2,964,746	+		DZA65_RS13810	0.23	+0.5
2,964,810	+		DZA65_RS13810	0.27	+0.0
2,964,810	+		DZA65_RS13810	0.27	+0.6
2,964,811	-		DZA65_RS13810	0.28	-1.5
2,964,838	+		DZA65_RS13810	0.29	-0.6
2,964,858	+		DZA65_RS13810	0.30	-1.0
2,964,858	+		DZA65_RS13810	0.30	+0.8
2,964,859	-		DZA65_RS13810	0.31	-0.5
2,964,859	-		DZA65_RS13810	0.31	+2.1
2,964,864	+		DZA65_RS13810	0.31	-0.4
2,964,864	+		DZA65_RS13810	0.31	+1.2
2,964,864	+		DZA65_RS13810	0.31	+0.2
2,964,864	+		DZA65_RS13810	0.31	-0.0
2,964,864	+		DZA65_RS13810	0.31	+1.3
2,964,865	-		DZA65_RS13810	0.31	+0.0
2,964,865	-		DZA65_RS13810	0.31	-0.2
2,964,865	-		DZA65_RS13810	0.31	-0.1
2,964,865	-				-0.2
2,964,865	-		DZA65_RS13810	0.31	+0.0
2,964,865	-		DZA65_RS13810	0.31	-0.8
2,964,871	+		DZA65_RS13810	0.31	+0.7
2,964,871	+		DZA65_RS13810	0.31	+0.0
2,964,871	+		DZA65_RS13810	0.31	+0.9
2,964,871	+		DZA65_RS13810	0.31	-0.6
2,964,871	+		DZA65_RS13810	0.31	-0.1
2,964,871	+		DZA65_RS13810	0.31	-1.8
2,964,871	+		DZA65_RS13810	0.31	+0.2
2,964,871	+		DZA65_RS13810	0.31	-1.8
2,964,872	-		DZA65_RS13810	0.31	-0.5
2,964,872	-		DZA65_RS13810	0.31	-0.5
2,964,872	-		DZA65_RS13810	0.31	+1.1
2,964,872	-		DZA65_RS13810	0.31	-0.8
2,964,872	-		DZA65_RS13810	0.31	-0.9
2,964,872	-		DZA65_RS13810	0.31	+0.1
2,964,872	-		DZA65_RS13810	0.31	-0.2
2,964,872	-		DZA65_RS13810	0.31	-0.1
2,964,872	-		DZA65_RS13810	0.31	+0.1
2,964,902	+		DZA65_RS13810	0.33	+0.8
2,964,903	-		DZA65_RS13810	0.33	-0.1
2,964,903	-		DZA65_RS13810	0.33	+0.3
2,964,980	+		DZA65_RS13810	0.38	+0.1
2,964,980	+		DZA65_RS13810	0.38	+0.5
2,964,980	+		DZA65_RS13810	0.38	-0.5
2,964,980	+		DZA65_RS13810	0.38	-2.1
2,964,989	+		DZA65_RS13810	0.39	+0.8
2,964,990	-		DZA65_RS13810	0.39	-0.4
2,964,996	+		DZA65_RS13810	0.39	+0.1
2,964,996	+		DZA65_RS13810	0.39	-1.5
2,964,996	+		DZA65_RS13810	0.39	-0.1
2,964,996	+		DZA65_RS13810	0.39	-0.1
2,964,996	+		DZA65_RS13810	0.39	+0.9
2,964,997	-		DZA65_RS13810	0.39	-0.6
2,964,997	-		DZA65_RS13810	0.39	-1.5
2,964,997	-		DZA65_RS13810	0.39	+0.9
2,964,997	-		DZA65_RS13810	0.39	-2.3
2,965,096	+		DZA65_RS13810	0.45	-0.5
2,965,097	-		DZA65_RS13810	0.45	-0.9
2,965,097	-		DZA65_RS13810	0.45	-1.3
2,965,159	+		DZA65_RS13810	0.49	-0.5
2,965,159	+		DZA65_RS13810	0.49	+0.8
2,965,159	+		DZA65_RS13810	0.49	-1.5
2,965,159	+		DZA65_RS13810	0.49	-1.5
2,965,159	+		DZA65_RS13810	0.49	-2.3
2,965,159	+		DZA65_RS13810	0.49	+1.1
2,965,159	+		DZA65_RS13810	0.49	-0.5
2,965,160	-		DZA65_RS13810	0.49	+0.3
2,965,160	-		DZA65_RS13810	0.49	+0.4
2,965,160	-		DZA65_RS13810	0.49	-0.6
2,965,160	-		DZA65_RS13810	0.49	+0.7
2,965,160	-		DZA65_RS13810	0.49	-1.1
2,965,160	-		DZA65_RS13810	0.49	+0.5
2,965,160	-		DZA65_RS13810	0.49	-0.9
2,965,160	-		DZA65_RS13810	0.49	-1.0
2,965,411	+		DZA65_RS13810	0.65	-0.1
2,965,412	-		DZA65_RS13810	0.65	-0.5
2,965,445	+		DZA65_RS13810	0.67	+0.5
2,965,446	-		DZA65_RS13810	0.67	+0.3
2,965,479	-		DZA65_RS13810	0.69	-0.1
2,965,501	+		DZA65_RS13810	0.71	+0.5
2,965,502	-		DZA65_RS13810	0.71	+0.2
2,965,770	-		DZA65_RS13810	0.87	-0.1
2,965,799	+		DZA65_RS13810	0.89	+0.2
2,965,868	+				-0.8
2,965,868	+				-1.1
2,965,868	+				+0.3
2,965,869	-				+1.5
2,965,919	+				-0.3
2,965,926	-				-0.5
2,965,931	+				-0.6
2,965,931	+				+0.2
2,965,932	-				-1.5
2,965,932	-				-0.8
2,965,932	-				+0.1
2,965,932	-				-0.1
2,965,932	-				+0.8
2,965,945	+				-2.1
2,965,945	+				+0.1
2,965,945	+				+0.5
2,965,945	+				+0.1
2,965,945	+				+0.2
2,965,945	+				+1.1
2,965,945	+				+0.2
2,965,946	-				+0.5
2,965,946	-				-2.1
2,965,986	+				+0.7
2,965,986	+				-0.4
2,965,991	+				+0.0
2,966,014	+				-0.5
2,966,014	+				+1.5
2,966,015	-				-0.8
2,966,015	-				-0.5
2,966,028	+				-1.1
2,966,028	+				-2.7
2,966,029	-				+1.5
2,966,029	-				-0.8
2,966,029	-				+0.4
2,966,059	+				+0.5
2,966,059	+				+0.9
2,966,059	+				+2.5
2,966,096	+				+0.2
2,966,143	+				+0.2
2,966,144	-				-0.5
2,966,147	+				+0.8
2,966,147	+				+0.2
2,966,148	-				+0.8
2,966,231	+		DZA65_RS13815	0.12	-0.6
2,966,267	+		DZA65_RS13815	0.15	+0.1
2,966,268	-		DZA65_RS13815	0.15	-0.5
2,966,588	-		DZA65_RS13815	0.44	+0.3
2,966,664	+		DZA65_RS13815	0.50	-0.7
2,966,687	-		DZA65_RS13815	0.52	+0.5
2,966,733	+		DZA65_RS13815	0.56	-0.1
2,966,956	-		DZA65_RS13815	0.76	-0.5
2,966,956	-		DZA65_RS13815	0.76	-1.0