Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06465

Experiment: Stem-Atlantic

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Atlantic
1,345,186	-				-1.4
1,345,240	+				+0.0
1,345,240	+				-0.4
1,345,263	+				-1.7
1,345,263	+				-0.9
1,345,263	+				+2.2
1,345,263	+				-0.1
1,346,165	-				-1.3
1,346,257	+				-1.3
1,346,258	-				-1.2
1,346,274	-				-1.3
1,346,274	-				-2.5
1,346,275	+				-0.7
1,346,275	+				-0.6
1,346,276	-				-2.7
1,346,276	-				-1.3
1,346,375	+		DZA65_RS06465	0.18	+0.4
1,346,376	-		DZA65_RS06465	0.19	-1.7
1,346,376	-		DZA65_RS06465	0.19	-0.9
1,346,376	-		DZA65_RS06465	0.19	-1.3
1,346,409	+		DZA65_RS06465	0.22	+0.1
1,346,410	-		DZA65_RS06465	0.22	-2.5
1,346,410	-		DZA65_RS06465	0.22	-1.8
1,346,410	-		DZA65_RS06465	0.22	-0.3
1,346,410	-		DZA65_RS06465	0.22	-0.7
1,346,573	-		DZA65_RS06465	0.37	-0.7
1,346,573	-		DZA65_RS06465	0.37	-1.3
1,346,673	+		DZA65_RS06465	0.47	-2.7
1,346,673	+		DZA65_RS06465	0.47	-1.2
1,346,674	-		DZA65_RS06465	0.47	-1.9
1,346,738	-		DZA65_RS06465	0.53	-2.5
1,346,775	-		DZA65_RS06465	0.57	-2.5
1,346,776	+		DZA65_RS06465	0.57	+1.0
1,346,776	+		DZA65_RS06465	0.57	+1.0
1,346,776	+		DZA65_RS06465	0.57	-0.3
1,346,776	+		DZA65_RS06465	0.57	-0.3
1,346,777	-		DZA65_RS06465	0.57	+0.2
1,346,794	+		DZA65_RS06465	0.59	+0.8
1,346,794	+		DZA65_RS06465	0.59	-1.3
1,346,794	+		DZA65_RS06465	0.59	+0.7
1,346,794	+		DZA65_RS06465	0.59	-0.2
1,346,794	+		DZA65_RS06465	0.59	-1.1
1,346,794	+		DZA65_RS06465	0.59	+0.3
1,346,794	+		DZA65_RS06465	0.59	-0.3
1,346,795	-		DZA65_RS06465	0.59	-3.2
1,346,795	-		DZA65_RS06465	0.59	-0.7
1,346,795	-		DZA65_RS06465	0.59	-3.4
1,346,795	-		DZA65_RS06465	0.59	-1.7
1,346,795	-		DZA65_RS06465	0.59	-1.9
1,346,795	-		DZA65_RS06465	0.59	-3.8
1,346,795	-		DZA65_RS06465	0.59	-1.9
1,346,795	-		DZA65_RS06465	0.59	-1.2
1,346,927	+		DZA65_RS06465	0.71	-0.0
1,346,928	-		DZA65_RS06465	0.72	-1.9
1,346,928	-		DZA65_RS06465	0.72	+0.1
1,346,928	-		DZA65_RS06465	0.72	-2.2
1,346,937	+		DZA65_RS06465	0.72	-0.5
1,346,937	+		DZA65_RS06465	0.72	-0.3
1,346,937	+		DZA65_RS06465	0.72	-0.8
1,347,023	+		DZA65_RS06465	0.81	+1.1
1,347,023	+		DZA65_RS06465	0.81	-1.9
1,347,023	+		DZA65_RS06465	0.81	-0.1
1,347,023	+		DZA65_RS06465	0.81	-0.9
1,347,023	+		DZA65_RS06465	0.81	+1.1
1,347,024	-		DZA65_RS06465	0.81	-0.9
1,347,024	-		DZA65_RS06465	0.81	-1.9
1,347,024	-		DZA65_RS06465	0.81	-0.9
1,347,024	-		DZA65_RS06465	0.81	-0.9
1,347,024	-		DZA65_RS06465	0.81	-4.5
1,347,024	-		DZA65_RS06465	0.81	-0.5
1,347,025	+		DZA65_RS06465	0.81	+1.0
1,347,025	+		DZA65_RS06465	0.81	-0.1
1,347,025	+		DZA65_RS06465	0.81	-2.2
1,347,025	+		DZA65_RS06465	0.81	-2.2
1,347,025	+		DZA65_RS06465	0.81	+0.7
1,347,040	+		DZA65_RS06465	0.82	+1.2
1,347,040	+		DZA65_RS06465	0.82	-0.3
1,347,092	+		DZA65_RS06465	0.87	+2.1
1,347,092	+		DZA65_RS06465	0.87	+2.2
1,347,092	+		DZA65_RS06465	0.87	+0.2
1,347,093	-		DZA65_RS06465	0.87	-0.3
1,347,157	+				+0.3
1,347,157	+				+0.5
1,347,157	+				-0.6
1,347,157	+				-0.1
1,347,157	+				-0.5
1,347,157	+				+0.7
1,347,157	+				-1.5
1,347,157	+				-1.8
1,347,157	+				-1.5
1,347,157	+				-1.7
1,347,158	-				-2.2
1,347,158	-				-0.7
1,347,158	-				-1.3
1,347,158	-				-2.3
1,347,158	-				-2.7
1,347,158	-				-2.7
1,347,158	-				-1.9
1,347,158	-				-2.8
1,347,158	-				-2.9
1,347,158	-				-1.9
1,347,162	+				-0.7
1,347,230	+				-0.0
1,347,230	+				-0.7
1,347,230	+				-2.0
1,347,231	-				-3.2
1,347,231	-				-0.3
1,347,235	+				-0.4
1,347,235	+				+0.2
1,347,235	+				+0.2
1,347,235	+				+0.5
1,347,235	+				+0.7
1,347,235	+				-0.8
1,347,235	+				-0.1
1,347,235	+				+0.6
1,347,235	+				+0.1
1,347,235	+				+0.3
1,347,235	+				-0.1
1,347,235	+				+0.7
1,347,235	+				-1.0
1,347,235	+				+3.2
1,347,235	+				-0.0
1,347,235	+				-0.0
1,347,235	+				+0.7
1,347,235	+				+0.5
1,347,235	+				+0.2
1,347,235	+				+0.7
1,347,235	+				+0.2
1,347,235	+				-0.3
1,347,235	+				-0.7
1,347,235	+				-0.7
1,347,235	+				+1.2
1,347,235	+				-0.1
1,347,235	+				-0.5
1,347,235	+				-0.3
1,347,235	+				-1.2
1,347,235	+				+0.1
1,347,235	+				-0.2
1,347,235	+				+0.3
1,347,235	+				-0.1
1,347,235	+				+0.2
1,347,236	-				-0.9
1,347,236	-				-1.3
1,347,236	-				-0.9
1,347,236	-				-1.7
1,347,236	-				-3.3
1,347,236	-				-0.9
1,347,236	-				-1.9
1,347,236	-				-0.3
1,347,236	-				-1.7
1,347,236	-				-0.9
1,347,236	-				-1.9
1,347,236	-				-2.2
1,347,236	-				-1.1
1,347,236	-				-0.7
1,347,236	-				-0.3
1,347,236	-				-3.0
1,347,236	-				-1.3
1,347,236	-				-0.9
1,347,236	-				-1.7
1,347,236	-				+0.7
1,347,236	-				-2.7
1,347,236	-				-0.1
1,347,236	-				-1.7
1,347,236	-				-1.3
1,347,236	-				-2.5
1,347,236	-				-2.5
1,347,236	-				-2.0
1,347,236	-				-1.9
1,347,236	-				-1.3
1,347,236	-				-0.3
1,347,236	-				-2.7
1,347,236	-				-2.5
1,347,236	-				-0.3
1,347,236	-				-2.7
1,347,236	-				-3.4
1,347,236	-				-1.7
1,347,237	+				+0.8
1,347,237	+				-0.5
1,347,237	+				+1.4
1,347,237	+				+1.1
1,347,237	+				-2.9
1,347,237	+				-0.3
1,347,237	+				-1.3
1,347,238	-				-0.9
1,347,238	-				+0.7
1,347,238	-				-2.2
1,347,239	+				-2.5
1,347,239	+				-0.6
1,347,240	-				-2.5
1,347,244	+				-1.7
1,347,244	+				+0.5
1,347,245	-				-0.9
1,347,249	-				-4.0
1,347,249	-				-3.3
1,347,249	-				-2.4
1,347,292	+				-0.4
1,347,292	+				+0.9
1,347,293	-				-2.4
1,347,293	-				-0.8
1,347,293	-				-2.8
1,347,293	-				-2.5
1,347,294	+				-0.9
1,347,295	-				-2.9
1,347,300	+				+0.6
1,347,300	+				+1.2
1,347,300	+				+0.4
1,347,300	+				-0.7
1,347,300	+				+0.6
1,347,301	-				-1.9
1,347,301	-				-0.8
1,347,302	+				-0.7
1,347,302	+				+0.9
1,347,302	+				+0.6
1,347,302	+				+1.0
1,347,302	+				-1.4
1,347,303	-				-3.1
1,347,333	+				-1.4
1,347,333	+				-1.7
1,347,333	+				+0.6
1,347,334	-				-1.9
1,347,334	-				-0.8
1,347,354	+				+1.5
1,347,354	+				-0.9
1,347,355	-				-0.9
1,347,395	+				+1.9
1,347,395	+				+0.6
1,347,395	+				+0.1
1,347,395	+				-0.1
1,347,395	+				+0.4
1,347,395	+				-1.2
1,347,395	+				-0.1
1,347,396	-				-0.4
1,347,396	-				-1.7
1,347,396	-				-1.7
1,347,396	-				-0.4
1,347,396	-				-1.7
1,347,396	-				-2.4
1,347,396	-				-1.4
1,347,396	-				-1.9
1,347,396	-				-0.7
1,347,396	-				-1.7
1,347,396	-				-1.9
1,347,409	-				-1.4
1,347,411	+				-1.9
1,347,412	-				-1.7
1,347,427	+				-1.4
1,347,427	+				-1.9
1,347,428	-				-1.9
1,347,428	-				+0.6
1,347,463	-				-2.4
1,347,463	-				-2.4
1,347,509	+		DZA65_RS06470	0.13	-2.8
1,347,509	+		DZA65_RS06470	0.13	-2.6
1,347,509	+		DZA65_RS06470	0.13	-2.8
1,347,509	+		DZA65_RS06470	0.13	-3.4
1,347,509	+		DZA65_RS06470	0.13	-3.2
1,347,510	-		DZA65_RS06470	0.13	-2.4
1,347,510	-		DZA65_RS06470	0.13	-1.4
1,347,510	-		DZA65_RS06470	0.13	-1.5
1,347,552	-		DZA65_RS06470	0.19	-0.7
1,347,698	+		DZA65_RS06470	0.39	+0.1
1,347,722	+		DZA65_RS06470	0.43	-0.0
1,347,822	+		DZA65_RS06470	0.57	-2.2
1,347,882	+		DZA65_RS06470	0.65	-3.4
1,347,882	+		DZA65_RS06470	0.65	-0.6
1,347,882	+		DZA65_RS06470	0.65	-1.9
1,347,882	+		DZA65_RS06470	0.65	-2.7
1,347,882	+		DZA65_RS06470	0.65	-4.0
1,347,883	-		DZA65_RS06470	0.65	-2.5
1,347,883	-		DZA65_RS06470	0.65	-0.0
1,347,883	-		DZA65_RS06470	0.65	-1.4
1,347,883	-		DZA65_RS06470	0.65	-1.7
1,347,883	-		DZA65_RS06470	0.65	-1.8
1,347,883	-		DZA65_RS06470	0.65	-0.7
1,347,883	-		DZA65_RS06470	0.65	-0.4
1,348,089	+				-1.4
1,348,090	-				-2.4
1,348,090	-				-1.9
1,348,129	-				-2.5
1,348,144	+				-0.2
1,348,199	+				-2.6
1,348,199	+				-0.1
1,348,200	-				-0.4
1,348,200	-				+0.6
1,348,202	+				-0.5
1,348,202	+				-0.4
1,348,202	+				-0.2
1,348,203	-				-0.6
1,348,203	-				-1.7
1,348,219	+				+1.2
1,348,220	-				-0.1