Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07780

Experiment: Stem-Upstate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Upstate
1,621,679	+		DZA65_RS07775	0.61	-1.5
1,621,679	+		DZA65_RS07775	0.61	+1.1
1,621,691	+		DZA65_RS07775	0.61	-0.0
1,621,691	+		DZA65_RS07775	0.61	+0.3
1,621,691	+		DZA65_RS07775	0.61	+3.0
1,621,691	+		DZA65_RS07775	0.61	-1.5
1,621,691	+		DZA65_RS07775	0.61	-0.7
1,621,692	-		DZA65_RS07775	0.61	+1.1
1,621,692	-		DZA65_RS07775	0.61	-1.6
1,621,692	-		DZA65_RS07775	0.61	-0.3
1,621,692	-		DZA65_RS07775	0.61	-0.3
1,621,692	-		DZA65_RS07775	0.61	+0.1
1,621,692	-		DZA65_RS07775	0.61	-0.6
1,621,692	-		DZA65_RS07775	0.61	-0.3
1,621,692	-		DZA65_RS07775	0.61	+0.7
1,621,769	+		DZA65_RS07775	0.65	-2.5
1,622,010	+		DZA65_RS07775	0.76	-2.7
1,622,010	+		DZA65_RS07775	0.76	+2.9
1,622,010	+		DZA65_RS07775	0.76	-2.0
1,622,010	+		DZA65_RS07775	0.76	+0.6
1,622,011	-		DZA65_RS07775	0.76	+3.8
1,622,011	-		DZA65_RS07775	0.76	-1.5
1,622,011	-		DZA65_RS07775	0.76	+1.5
1,622,011	-		DZA65_RS07775	0.76	-1.5
1,622,013	+		DZA65_RS07775	0.76	+3.0
1,622,104	+		DZA65_RS07775	0.80	-0.3
1,622,123	+		DZA65_RS07775	0.81	+0.0
1,622,123	+		DZA65_RS07775	0.81	-2.5
1,622,123	+		DZA65_RS07775	0.81	-0.6
1,622,123	+		DZA65_RS07775	0.81	-0.6
1,622,123	+		DZA65_RS07775	0.81	-0.8
1,622,124	-		DZA65_RS07775	0.81	-1.9
1,622,124	-		DZA65_RS07775	0.81	-3.0
1,622,124	-		DZA65_RS07775	0.81	+2.4
1,622,124	-		DZA65_RS07775	0.81	+0.3
1,622,124	-		DZA65_RS07775	0.81	-1.3
1,622,126	+		DZA65_RS07775	0.81	+1.1
1,622,127	-		DZA65_RS07775	0.81	+0.2
1,622,266	+		DZA65_RS07775	0.88	+3.2
1,622,267	-		DZA65_RS07775	0.88	+0.4
1,622,267	-		DZA65_RS07775	0.88	+0.7
1,622,318	+				-1.3
1,622,319	-				-1.9
1,622,390	+				+1.3
1,622,390	+				-0.9
1,622,390	+				-1.1
1,622,390	+				+1.1
1,622,390	+				+0.7
1,622,390	+				+0.5
1,622,391	-				+2.7
1,622,391	-				+1.4
1,622,391	-				-0.0
1,622,391	-				+0.3
1,622,391	-				-0.3
1,622,391	-				-2.1
1,622,501	+				+0.8
1,622,539	-				+0.4
1,622,604	-				-0.9
1,622,606	+				+1.0
1,622,606	+				-0.5
1,622,636	-				-3.0
1,622,678	+				-2.3
1,622,678	+				+0.3
1,622,678	+				+0.6
1,622,678	+				-1.0
1,622,678	+				-1.2
1,622,679	-				-0.3
1,622,680	+				-1.5
1,622,680	+				-0.9
1,622,681	-				+1.0
1,622,681	-				-1.6
1,623,711	-				-1.3
1,623,755	+				+0.7
1,623,811	-		DZA65_RS07785	0.10	-1.6
1,623,812	+		DZA65_RS07785	0.10	+0.2
1,623,812	+		DZA65_RS07785	0.10	+0.8
1,623,813	-		DZA65_RS07785	0.10	-0.4
1,623,813	-		DZA65_RS07785	0.10	+0.1
1,623,828	+		DZA65_RS07785	0.11	+2.3
1,623,829	-		DZA65_RS07785	0.11	-1.3
1,623,829	-		DZA65_RS07785	0.11	+0.2
1,623,832	-		DZA65_RS07785	0.12	+1.2
1,623,832	-		DZA65_RS07785	0.12	-0.9
1,623,843	-		DZA65_RS07785	0.13	-1.9
1,623,843	-		DZA65_RS07785	0.13	-2.7
1,623,846	-		DZA65_RS07785	0.13	-1.6
1,623,846	-		DZA65_RS07785	0.13	+2.1
1,623,846	-		DZA65_RS07785	0.13	-0.5
1,623,846	-		DZA65_RS07785	0.13	-2.2
1,623,846	-		DZA65_RS07785	0.13	-1.6
1,623,856	+		DZA65_RS07785	0.14	+0.7
1,623,950	-		DZA65_RS07785	0.22	-0.5
1,623,950	-		DZA65_RS07785	0.22	-1.1
1,623,959	+		DZA65_RS07785	0.22	-1.6
1,623,960	-				-1.6
1,623,960	-		DZA65_RS07785	0.22	+1.5
1,623,960	-		DZA65_RS07785	0.22	-1.3
1,623,979	+		DZA65_RS07785	0.24	-1.5
1,623,979	+		DZA65_RS07785	0.24	+1.4
1,623,979	+		DZA65_RS07785	0.24	-0.1
1,623,979	+		DZA65_RS07785	0.24	-0.3
1,623,980	-		DZA65_RS07785	0.24	-2.1
1,623,980	-		DZA65_RS07785	0.24	-2.9
1,623,980	-		DZA65_RS07785	0.24	-0.3
1,623,980	-		DZA65_RS07785	0.24	-2.1
1,623,980	-		DZA65_RS07785	0.24	+1.3
1,623,986	+		DZA65_RS07785	0.24	+2.0
1,623,987	-		DZA65_RS07785	0.25	+0.7
1,624,003	+		DZA65_RS07785	0.26	-0.7
1,624,003	+		DZA65_RS07785	0.26	+2.3
1,624,003	+		DZA65_RS07785	0.26	+0.6
1,624,003	+		DZA65_RS07785	0.26	-1.6
1,624,004	-		DZA65_RS07785	0.26	-2.7
1,624,033	+		DZA65_RS07785	0.28	-3.1
1,624,161	-		DZA65_RS07785	0.39	-2.5
1,624,182	-		DZA65_RS07785	0.41	+2.3
1,624,206	-		DZA65_RS07785	0.43	+0.5
1,624,207	+		DZA65_RS07785	0.43	+0.7
1,624,207	+		DZA65_RS07785	0.43	+0.6
1,624,207	+		DZA65_RS07785	0.43	-0.9
1,624,207	+		DZA65_RS07785	0.43	+0.5
1,624,208	-		DZA65_RS07785	0.43	+0.8
1,624,208	-		DZA65_RS07785	0.43	-0.3
1,624,208	-		DZA65_RS07785	0.43	-0.4
1,624,208	-		DZA65_RS07785	0.43	-1.6
1,624,208	-		DZA65_RS07785	0.43	+0.7
1,624,208	-		DZA65_RS07785	0.43	-0.3
1,624,208	-		DZA65_RS07785	0.43	+1.8
1,624,274	+		DZA65_RS07785	0.48	-3.7
1,624,275	-		DZA65_RS07785	0.48	-0.9
1,624,275	-		DZA65_RS07785	0.48	-2.5
1,624,275	-		DZA65_RS07785	0.48	-0.9
1,624,275	-		DZA65_RS07785	0.48	+0.4
1,624,372	+		DZA65_RS07785	0.56	+2.9
1,624,372	+		DZA65_RS07785	0.56	-0.3
1,624,399	-		DZA65_RS07785	0.59	-1.6
1,624,399	-		DZA65_RS07785	0.59	+0.4
1,624,408	-		DZA65_RS07785	0.59	+0.0
1,624,408	-		DZA65_RS07785	0.59	+1.3
1,624,433	+		DZA65_RS07785	0.61	+3.7
1,624,452	-		DZA65_RS07785	0.63	+0.5
1,624,470	-		DZA65_RS07785	0.65	-2.1
1,624,474	-		DZA65_RS07785	0.65	+3.7
1,624,474	-				-1.6
1,624,540	+		DZA65_RS07785	0.70	-2.9
1,624,540	+		DZA65_RS07785	0.70	+1.8
1,624,540	+		DZA65_RS07785	0.70	+1.7
1,624,541	-		DZA65_RS07785	0.70	-0.9
1,624,541	-		DZA65_RS07785	0.70	-0.9
1,624,541	-		DZA65_RS07785	0.70	+0.7
1,624,541	-		DZA65_RS07785	0.70	+1.1
1,624,541	-		DZA65_RS07785	0.70	-3.1
1,624,541	-		DZA65_RS07785	0.70	+0.0
1,624,541	-		DZA65_RS07785	0.70	+1.1
1,624,545	+		DZA65_RS07785	0.71	-0.6
1,624,569	+		DZA65_RS07785	0.73	-2.5
1,624,569	+		DZA65_RS07785	0.73	+1.2
1,624,570	-		DZA65_RS07785	0.73	+0.6
1,624,575	+		DZA65_RS07785	0.73	+3.4
1,624,575	+		DZA65_RS07785	0.73	-1.2
1,624,576	-		DZA65_RS07785	0.73	+1.3
1,624,576	-		DZA65_RS07785	0.73	-2.3
1,624,576	-		DZA65_RS07785	0.73	-0.2
1,624,576	-		DZA65_RS07785	0.73	+0.7
1,624,578	+		DZA65_RS07785	0.73	+0.3