Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18695

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
4,025,287	+				-0.1
4,025,287	+				+2.6
4,025,287	+				+2.4
4,025,287	+				+0.2
4,025,287	+				-1.2
4,025,287	+				+0.3
4,025,287	+				-0.0
4,025,287	+				-2.8
4,025,287	+				-0.2
4,025,287	+				-0.4
4,025,287	+				-0.0
4,025,288	-				-0.4
4,025,288	-				+1.6
4,025,288	-				+2.2
4,025,288	-				-1.0
4,025,288	-				+1.3
4,025,288	-				+1.6
4,025,288	-				-2.2
4,025,288	-				-1.2
4,025,288	-				+0.3
4,025,288	-				-1.2
4,025,288	-				-1.2
4,025,288	-				+0.7
4,025,288	-				+0.9
4,025,303	+				-0.9
4,025,303	+				+1.1
4,025,304	-				+0.8
4,025,304	-				+2.0
4,025,321	+				+0.3
4,025,337	+				-1.4
4,025,337	+				-0.4
4,025,337	+				-1.9
4,025,337	+				-1.1
4,025,337	+				-1.9
4,025,337	+				-0.4
4,025,338	-				-3.1
4,025,338	-				-0.0
4,025,338	-				+0.2
4,025,338	-				+1.6
4,025,338	-				-1.4
4,025,338	-				-0.2
4,025,338	-				+0.6
4,025,338	-				-1.7
4,025,338	-				-0.7
4,025,338	-				-0.7
4,025,338	-				-1.9
4,025,353	+				+1.9
4,025,372	+				-0.0
4,025,373	-				-0.7
4,025,373	-				-0.3
4,025,381	+				-1.5
4,025,381	+				+0.6
4,025,432	+				-0.0
4,025,432	+				-0.7
4,025,433	-				+1.8
4,025,442	-				-0.4
4,025,442	-				+0.4
4,025,442	-				-1.0
4,025,442	-				+0.6
4,025,459	-				+0.3
4,025,459	-				-2.2
4,025,493	-				+0.6
4,025,528	-				+0.6
4,025,552	+				+0.4
4,025,552	+				+1.6
4,025,552	+				-0.5
4,025,553	-				+2.0
4,025,553	-				-1.9
4,025,562	-				+2.4
4,025,678	+				-2.4
4,025,678	+				-0.0
4,025,678	+				+0.6
4,025,754	-				+0.7
4,025,771	-		DZA65_RS18690	0.12	-0.0
4,025,771	-		DZA65_RS18690	0.12	+1.1
4,025,801	+		DZA65_RS18690	0.17	-1.3
4,025,842	-		DZA65_RS18690	0.25	+2.1
4,025,842	-		DZA65_RS18690	0.25	+1.3
4,026,023	-		DZA65_RS18690	0.57	+1.6
4,026,023	-		DZA65_RS18690	0.57	-0.3
4,026,024	+		DZA65_RS18690	0.57	-0.7
4,026,025	-		DZA65_RS18690	0.58	-0.4
4,026,025	-		DZA65_RS18690	0.58	-0.7
4,026,025	-		DZA65_RS18690	0.58	+0.7
4,026,025	-		DZA65_RS18690	0.58	+0.6
4,026,077	+		DZA65_RS18690	0.67	-1.5
4,026,077	+		DZA65_RS18690	0.67	-1.6
4,026,077	+		DZA65_RS18690	0.67	+0.6
4,026,078	-		DZA65_RS18690	0.67	-1.0
4,026,078	-		DZA65_RS18690	0.67	-0.9
4,026,247	+				-1.4
4,026,249	+				-0.4
4,026,249	+				+1.6
4,026,249	+				-0.4
4,026,249	+				+0.4
4,026,249	+				-1.4
4,026,249	+				+1.0
4,026,249	+				-0.2
4,026,249	+				+1.7
4,026,249	+				-0.1
4,026,249	+				-0.7
4,026,249	+				-0.7
4,026,249	+				-0.2
4,026,249	+				-1.2
4,026,250	-				-1.7
4,026,250	-				-0.0
4,026,250	-				+0.6
4,026,250	-				+1.2
4,026,250	-				-0.4
4,026,250	-				-1.9
4,026,250	-				-0.1
4,026,250	-				-1.3
4,026,250	-				+0.3
4,026,318	+				+2.1
4,026,318	+				+0.2
4,026,318	+				-1.0
4,026,318	+				-0.4
4,026,318	+				+0.6
4,026,318	+				+1.9
4,026,318	+				-0.0
4,026,318	+				+0.4
4,026,318	+				-0.4
4,026,318	+				-1.9
4,026,318	+				-1.2
4,026,318	+				+1.0
4,026,318	+				+0.8
4,026,318	+				-0.0
4,026,319	-				-1.0
4,026,319	-				+2.0
4,026,365	-				+1.0
4,026,378	+		DZA65_RS18695	0.11	+0.6
4,026,378	+		DZA65_RS18695	0.11	-0.8
4,026,379	-		DZA65_RS18695	0.11	+0.6
4,026,392	-		DZA65_RS18695	0.12	-0.0
4,026,552	+		DZA65_RS18695	0.28	-1.6
4,026,750	+		DZA65_RS18695	0.48	-0.9
4,026,778	+		DZA65_RS18695	0.51	+0.8
4,026,794	+		DZA65_RS18695	0.52	-2.2
4,026,795	-		DZA65_RS18695	0.52	-0.0
4,026,795	-		DZA65_RS18695	0.52	+2.3
4,026,904	-		DZA65_RS18695	0.63	-0.9
4,026,950	-		DZA65_RS18695	0.68	-0.7
4,026,950	-		DZA65_RS18695	0.68	-0.7
4,026,950	-		DZA65_RS18695	0.68	-3.1
4,026,991	+		DZA65_RS18695	0.72	-1.9
4,026,991	+		DZA65_RS18695	0.72	+0.3
4,026,991	+		DZA65_RS18695	0.72	-1.6
4,027,273	+				-0.4
4,027,273	+				+1.6
4,027,279	+				-0.0
4,027,279	+				+2.6
4,027,280	-				+0.6
4,027,280	-				-2.0
4,027,280	-				+3.9
4,027,280	-				-1.0
4,027,280	-				-1.7
4,027,294	+				+0.9
4,027,294	+				-0.7
4,027,295	-				-1.2
4,027,327	-				-0.7
4,027,366	+				+1.3
4,027,366	+				+0.8
4,027,366	+				-1.0
4,027,366	+				-1.0
4,027,366	+				+0.6
4,027,366	+				+0.6
4,027,366	+				-1.9
4,027,367	-				+0.6
4,027,367	-				-0.0
4,027,367	-				-0.9
4,027,367	-				-0.2
4,027,367	-				-2.1
4,027,393	+		DZA65_RS18700	0.11	-1.5
4,027,393	+		DZA65_RS18700	0.11	+1.2
4,027,462	+		DZA65_RS18700	0.18	+0.1
4,027,462	+		DZA65_RS18700	0.18	-1.0
4,027,462	+		DZA65_RS18700	0.18	-0.2
4,027,462	+		DZA65_RS18700	0.18	+0.4
4,027,463	-		DZA65_RS18700	0.18	-3.0
4,027,463	-		DZA65_RS18700	0.18	+3.2
4,027,463	-		DZA65_RS18700	0.18	-0.7
4,027,463	-		DZA65_RS18700	0.18	-1.2
4,027,463	-		DZA65_RS18700	0.18	-0.7
4,027,528	+		DZA65_RS18700	0.25	-0.0
4,027,528	+		DZA65_RS18700	0.25	-0.6
4,027,528	+		DZA65_RS18700	0.25	-0.4
4,027,528	+		DZA65_RS18700	0.25	-0.4
4,027,528	+		DZA65_RS18700	0.25	+0.7
4,027,528	+		DZA65_RS18700	0.25	+0.8
4,027,528	+		DZA65_RS18700	0.25	+1.6
4,027,528	+		DZA65_RS18700	0.25	-0.0
4,027,528	+		DZA65_RS18700	0.25	-2.0
4,027,528	+		DZA65_RS18700	0.25	-0.2
4,027,529	-		DZA65_RS18700	0.25	-0.7
4,027,529	-		DZA65_RS18700	0.25	-0.7
4,027,529	-		DZA65_RS18700	0.25	+1.0
4,027,529	-		DZA65_RS18700	0.25	+1.6
4,027,529	-		DZA65_RS18700	0.25	+0.9
4,027,529	-		DZA65_RS18700	0.25	-0.7
4,027,529	-		DZA65_RS18700	0.25	+0.6
4,027,529	-		DZA65_RS18700	0.25	-2.6
4,027,529	-		DZA65_RS18700	0.25	+0.6
4,027,529	-		DZA65_RS18700	0.25	-1.3
4,027,529	-		DZA65_RS18700	0.25	+0.6
4,027,529	-		DZA65_RS18700	0.25	+1.0
4,027,529	-		DZA65_RS18700	0.25	+1.0
4,027,529	-		DZA65_RS18700	0.25	+1.2
4,027,574	-		DZA65_RS18700	0.30	+1.4
4,027,639	+		DZA65_RS18700	0.37	-3.8
4,027,640	-		DZA65_RS18700	0.37	+0.6
4,027,640	-		DZA65_RS18700	0.37	-1.4
4,027,640	-		DZA65_RS18700	0.37	+0.1
4,027,740	+		DZA65_RS18700	0.47	-1.9
4,027,741	-		DZA65_RS18700	0.47	-0.7
4,027,819	-		DZA65_RS18700	0.55	-0.4
4,028,100	+		DZA65_RS18700	0.85	+0.6
4,028,101	-		DZA65_RS18700	0.85	-0.2
4,028,176	+				-0.9
4,028,176	+				-0.9
4,028,176	+				-2.0
4,028,177	-				-0.9
4,028,177	-				-1.0
4,028,177	-				-0.0
4,028,217	-				-1.0
4,028,217	-				+0.6
4,028,217	-				+0.6
4,028,217	-				+1.6