Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13390

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
2,869,073	+				-2.8
2,869,112	+				+2.7
2,869,113	-				+0.3
2,869,124	-				-2.4
2,869,136	-				+0.3
2,869,136	-				-0.3
2,869,140	+				-0.3
2,869,141	-				-1.5
2,869,141	-				+0.5
2,869,141	-				+2.4
2,869,142	+				-0.8
2,869,142	+				+0.8
2,869,142	+				+2.5
2,869,160	+				+0.7
2,869,160	+				+1.8
2,869,160	+				-0.3
2,869,160	+				-2.1
2,869,161	-				+1.7
2,869,161	-				-1.2
2,869,167	+				+0.3
2,869,167	+				-2.1
2,869,168	-				-0.2
2,869,175	+				-0.5
2,869,176	-				+0.8
2,869,198	+				+1.3
2,869,198	+				-0.7
2,869,198	+				-0.6
2,869,199	-				+1.3
2,869,199	-				+0.0
2,869,235	+				-0.7
2,869,558	+		DZA65_RS13385	0.68	-1.0
2,869,558	+		DZA65_RS13385	0.68	+2.0
2,869,559	-		DZA65_RS13385	0.68	-0.7
2,869,604	+		DZA65_RS13385	0.76	+0.1
2,869,604	+		DZA65_RS13385	0.76	+0.8
2,869,604	+		DZA65_RS13385	0.76	+1.7
2,869,605	-		DZA65_RS13385	0.76	-0.3
2,869,650	+		DZA65_RS13385	0.84	-0.1
2,869,703	-				-0.7
2,869,715	+				+0.4
2,869,742	+				+0.7
2,869,752	+				-0.3
2,869,752	+				+1.2
2,869,752	+				-1.1
2,869,752	+				-0.2
2,869,752	+				-0.3
2,869,752	+				-0.2
2,869,752	+				-0.1
2,869,752	+				-0.4
2,869,752	+				-1.8
2,869,753	-				+0.9
2,869,753	-				-2.8
2,869,753	-				-0.7
2,869,753	-				-0.4
2,869,753	-				-0.1
2,869,753	-				+1.7
2,869,755	+				-0.1
2,869,755	+				-1.3
2,869,755	+				+0.5
2,869,755	+				-0.1
2,869,756	-				-0.7
2,869,756	-				-0.3
2,869,756	-				+2.3
2,869,777	+				-0.3
2,869,777	+				+2.1
2,869,777	+				-2.3
2,869,777	+				-0.1
2,869,778	-				+0.3
2,869,778	-				-1.2
2,869,778	-				+1.1
2,869,778	-				-0.4
2,869,778	-				+1.8
2,869,784	+				-3.1
2,869,842	+				-2.3
2,869,843	-				+0.7
2,869,860	-				+1.3
2,869,972	+				+0.8
2,869,973	-				+0.5
2,870,016	-				-2.1
2,870,017	+				+0.5
2,870,018	-				-1.1
2,870,038	+				-1.1
2,870,039	-				-0.1
2,870,336	+		DZA65_RS13390	0.26	+2.1
2,870,336	+		DZA65_RS13390	0.26	+0.3
2,870,337	-		DZA65_RS13390	0.26	-0.2
2,870,337	-		DZA65_RS13390	0.26	-0.3
2,870,344	+		DZA65_RS13390	0.27	-1.5
2,870,345	-		DZA65_RS13390	0.27	-0.9
2,870,368	+		DZA65_RS13390	0.29	-2.5
2,870,368	+		DZA65_RS13390	0.29	+0.3
2,870,451	+		DZA65_RS13390	0.38	-0.7
2,870,451	+		DZA65_RS13390	0.38	-2.3
2,870,566	+		DZA65_RS13390	0.49	-1.1
2,870,566	+		DZA65_RS13390	0.49	-2.1
2,870,578	+		DZA65_RS13390	0.50	-1.1
2,870,579	-		DZA65_RS13390	0.50	-1.7
2,870,579	-		DZA65_RS13390	0.50	+0.3
2,870,595	+		DZA65_RS13390	0.52	+0.1
2,870,595	+		DZA65_RS13390	0.52	-1.3
2,870,595	+		DZA65_RS13390	0.52	-0.3
2,870,595	+		DZA65_RS13390	0.52	+0.3
2,870,602	+		DZA65_RS13390	0.53	-3.2
2,870,608	+		DZA65_RS13390	0.53	-1.1
2,870,608	+		DZA65_RS13390	0.53	-0.3
2,870,608	+		DZA65_RS13390	0.53	-0.7
2,870,609	-		DZA65_RS13390	0.53	-1.6
2,870,609	-		DZA65_RS13390	0.53	-1.4
2,870,609	-		DZA65_RS13390	0.53	-1.7
2,870,609	-		DZA65_RS13390	0.53	-2.1
2,870,668	+		DZA65_RS13390	0.59	-2.1
2,870,669	-		DZA65_RS13390	0.59	-2.2
2,870,669	-		DZA65_RS13390	0.59	-0.7
2,870,669	-		DZA65_RS13390	0.59	-2.1
2,870,839	+		DZA65_RS13390	0.76	-1.1
2,870,840	-		DZA65_RS13390	0.76	-0.3
2,870,840	-		DZA65_RS13390	0.76	-1.9
2,871,020	-				-0.7
2,871,062	-				-1.1
2,871,062	-				+0.3
2,871,075	+				+1.3
2,871,075	+				-0.1
2,871,075	+				-1.2
2,871,075	+				+0.3
2,871,075	+				+0.7
2,871,075	+				+0.3
2,871,075	+				-0.3
2,871,075	+				-0.3
2,871,075	+				+0.8
2,871,075	+				-0.1
2,871,076	-				-1.1
2,871,076	-				+0.1
2,871,076	-				-0.2
2,871,076	-				+0.7
2,871,076	-				-1.3
2,871,076	-				-0.3
2,871,076	-				-2.3
2,871,076	-				+1.9
2,871,076	-				-0.7
2,871,076	-				+1.3
2,871,116	+				-0.2
2,871,116	+				-0.5
2,871,116	+				+0.0
2,871,117	-				-1.9
2,871,117	-				+2.0
2,871,120	-				+1.1
2,871,193	+				+1.3
2,871,217	-				+1.6
2,871,245	+				-1.0
2,871,245	+				-0.3
2,871,245	+				-0.0
2,871,246	-				+1.3
2,871,246	-				-0.7
2,871,246	-				-0.7
2,871,337	-				-0.7
2,871,378	+				-1.1
2,871,378	+				-0.3
2,871,378	+				+0.5
2,871,379	-				-0.3
2,871,379	-				-0.1
2,871,387	+				-1.9
2,871,387	+				+0.8
2,871,387	+				-0.1
2,871,387	+				-1.1
2,871,388	-				-0.3
2,871,388	-				-2.1
2,871,389	+				-1.5
2,871,389	+				-0.3
2,871,389	+				-0.4
2,871,389	+				-3.1
2,871,389	+				+1.3
2,871,389	+				-1.1
2,871,389	+				+0.3
2,871,389	+				+0.1
2,871,389	+				-0.4
2,871,389	+				-0.2
2,871,389	+				-2.4
2,871,389	+				+0.7
2,871,389	+				-0.3
2,871,389	+				+0.3
2,871,389	+				+0.8
2,871,390	-				-1.2
2,871,390	-				+0.3
2,871,390	-				-0.7
2,871,390	-				+0.1
2,871,390	-				+1.8
2,871,390	-				+1.5
2,871,390	-				-0.2
2,871,390	-				-2.2
2,871,390	-				-0.3
2,871,391	+				+0.8
2,871,391	+				-1.3
2,871,391	+				+0.3
2,871,391	+				-1.7
2,871,391	+				-0.7
2,871,391	+				-1.3
2,871,391	+				-1.1
2,871,391	+				+2.0
2,871,392	-				-1.1
2,871,392	-				-1.2
2,871,392	-				-0.7
2,871,392	-				-0.1
2,871,392	-				-1.1
2,871,392	-				+0.5
2,871,392	-				+0.3
2,871,392	-				+0.7
2,871,392	-				-2.3
2,871,392	-				-1.9
2,871,392	-				-1.9
2,871,392	-				-2.5
2,871,392	-				+1.3
2,871,392	-				-1.9
2,871,392	-				-1.5
2,871,392	-				+1.8
2,871,392	-				-0.3
2,871,392	-				+0.5
2,871,392	-				-1.9
2,871,411	+				+1.3
2,871,411	+				+0.4
2,871,412	-				+0.7
2,871,414	-				-0.5
2,871,458	+				-1.1
2,871,458	+				+0.3
2,871,458	+				-1.3
2,871,459	-		DZA65_RS13395	0.10	-2.5
2,871,632	-		DZA65_RS13395	0.41	+0.3
2,871,758	-		DZA65_RS13395	0.64	+0.7
2,871,766	-		DZA65_RS13395	0.65	-2.1
2,871,833	+		DZA65_RS13395	0.77	-0.3
2,871,833	+		DZA65_RS13395	0.77	-0.1
2,871,833	+		DZA65_RS13395	0.77	-2.1
2,871,834	-		DZA65_RS13395	0.78	+0.3
2,871,834	-		DZA65_RS13395	0.78	-1.1
2,871,834	-		DZA65_RS13395	0.78	+1.4
2,871,841	+		DZA65_RS13395	0.79	-0.9
2,871,841	+		DZA65_RS13395	0.79	-0.7
2,871,841	+		DZA65_RS13395	0.79	+1.0
2,871,842	-		DZA65_RS13395	0.79	-0.7
2,871,850	-		DZA65_RS13395	0.81	-2.1
2,871,850	-		DZA65_RS13395	0.81	-0.7
2,871,900	+		DZA65_RS13395	0.90	-0.6
2,871,900	+		DZA65_RS13395	0.90	-0.3
2,871,901	-		DZA65_RS13395	0.90	+0.1
2,871,901	-		DZA65_RS13395	0.90	-1.5
2,871,901	-		DZA65_RS13395	0.90	-1.7
2,871,968	+				-0.0
2,871,968	+				-0.1
2,871,968	+				+0.3
2,871,969	-				+2.8
2,871,969	-				-1.1
2,871,970	+				+2.6
2,871,970	+				-0.3
2,871,971	-				+0.5
2,871,972	+				+1.3
2,871,972	+				+2.7
2,871,972	+				+0.8
2,871,973	-				-1.3
2,871,973	-				+1.7
2,871,973	-				+1.3
2,871,973	-				-0.7
2,871,987	+				-1.5
2,871,987	+				+1.3
2,871,987	+				-1.3
2,871,987	+				-0.3
2,871,987	+				+1.5
2,871,987	+				+0.3
2,871,987	+				-1.1
2,871,987	+				-1.2
2,871,987	+				+0.7
2,871,987	+				-1.1
2,871,987	+				-0.2
2,871,987	+				-0.1
2,871,987	+				+3.2
2,871,987	+				-1.1
2,871,988	-				-0.2
2,871,988	-				-0.4
2,871,988	-				+0.0
2,871,988	-				-0.3
2,871,988	-				+1.8
2,871,988	-				+0.5
2,871,988	-				+0.7
2,871,988	-				-1.1
2,871,988	-				-0.7
2,871,988	-				-1.2
2,871,988	-				-1.3
2,872,002	+				-0.3
2,872,022	+				+0.0
2,872,022	+				-0.3
2,872,022	+				+1.1
2,872,022	+				+0.9
2,872,023	-				-1.1
2,872,023	-				+2.0
2,872,023	-				+0.3
2,872,023	-				-1.9
2,872,023	-				+0.0
2,872,023	-				-1.3
2,872,023	-				+1.2
2,872,023	-				+0.5
2,872,023	-				-1.2
2,872,023	-				-1.3