Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS00455

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
108,656	+				-0.7
108,657	-				-1.2
108,657	-				-0.2
108,720	+				-0.2
108,720	+				-0.2
108,721	-				+1.2
108,721	-				+1.0
108,721	-				-0.0
108,756	-				-1.2
108,756	-				+0.2
108,774	-				+0.6
108,774	-				+1.6
108,774	-				+0.8
108,816	-				-0.0
108,833	+				-1.6
108,833	+				-0.4
108,965	-		DZA65_RS00450	0.24	-1.6
108,997	+		DZA65_RS00450	0.28	-2.7
108,997	+		DZA65_RS00450	0.28	-0.4
108,997	+		DZA65_RS00450	0.28	+1.6
108,997	+		DZA65_RS00450	0.28	-0.4
108,997	+		DZA65_RS00450	0.28	-0.4
108,998	-		DZA65_RS00450	0.28	+0.8
108,998	-		DZA65_RS00450	0.28	+1.0
108,998	-		DZA65_RS00450	0.28	-1.4
108,998	-		DZA65_RS00450	0.28	-1.9
108,998	-		DZA65_RS00450	0.28	-0.5
108,998	-		DZA65_RS00450	0.28	+1.6
108,998	-		DZA65_RS00450	0.28	+0.3
108,998	-		DZA65_RS00450	0.28	-0.3
109,146	-		DZA65_RS00450	0.47	+1.8
109,304	+		DZA65_RS00450	0.67	-0.9
109,304	+		DZA65_RS00450	0.67	-3.0
109,304	+		DZA65_RS00450	0.67	-0.6
109,304	+		DZA65_RS00450	0.67	-0.6
109,304	+		DZA65_RS00450	0.67	+1.6
109,304	+		DZA65_RS00450	0.67	-0.6
109,304	+		DZA65_RS00450	0.67	+1.8
109,304	+		DZA65_RS00450	0.67	+1.0
109,304	+		DZA65_RS00450	0.67	-0.2
109,304	+		DZA65_RS00450	0.67	-0.7
109,304	+		DZA65_RS00450	0.67	-0.4
109,304	+		DZA65_RS00450	0.67	+0.8
109,305	-		DZA65_RS00450	0.67	-1.9
109,305	-		DZA65_RS00450	0.67	-2.2
109,305	-		DZA65_RS00450	0.67	-1.4
109,305	-		DZA65_RS00450	0.67	+1.6
109,305	-		DZA65_RS00450	0.67	-0.9
109,305	-		DZA65_RS00450	0.67	-0.0
109,305	-		DZA65_RS00450	0.67	+2.9
109,305	-		DZA65_RS00450	0.67	-1.4
109,305	-		DZA65_RS00450	0.67	-0.0
109,305	-		DZA65_RS00450	0.67	-1.0
109,305	-		DZA65_RS00450	0.67	-1.9
109,305	-		DZA65_RS00450	0.67	+0.7
109,305	-		DZA65_RS00450	0.67	+0.6
109,305	-		DZA65_RS00450	0.67	-2.5
109,520	+				-2.2
109,520	+				-1.5
109,520	+				-2.0
109,520	+				-1.2
109,521	-				-1.1
109,521	-				-1.7
109,521	-				-0.0
109,532	+				+2.9
109,533	-				+0.8
109,533	-				+1.5
109,533	-				-1.0
109,533	-				-0.2
109,535	+				+1.3
109,535	+				-1.6
109,535	+				-0.0
109,535	+				+2.9
109,536	-				-0.2
109,536	-				-1.4
109,536	-				+1.4
109,536	-				+1.6
109,600	+				-1.7
109,600	+				-1.0
109,601	-				-1.0
109,619	+				-1.2
109,619	+				+1.8
109,619	+				-0.1
109,619	+				+3.4
109,619	+				-2.0
109,619	+				-1.0
109,619	+				-0.4
109,619	+				+0.8
109,619	+				+0.8
109,619	+				-1.2
109,619	+				+1.6
109,619	+				+0.6
109,619	+				-1.0
109,619	+				-2.1
109,620	-				+1.3
109,620	-				+0.6
109,620	-				-1.2
109,620	-				+0.9
109,620	-				-1.6
109,620	-				+0.4
109,620	-				+2.1
109,620	-				-0.0
109,620	-				-1.7
109,620	-				+2.2
109,650	+				-1.3
109,650	+				-0.0
109,650	+				+0.3
109,651	-				-0.7
109,651	-				-0.2
109,651	-				-0.0
109,698	+				+2.8
109,698	+				-3.1
109,698	+				-0.4
109,698	+				+0.3
109,698	+				-1.9
109,698	+				-0.0
109,698	+				-1.6
109,698	+				-1.2
109,699	-				+1.6
109,699	-				-1.2
109,699	-				-1.0
109,810	+		DZA65_RS00455	0.17	-0.8
109,810	+		DZA65_RS00455	0.17	-0.9
109,810	+		DZA65_RS00455	0.17	-0.4
109,810	+		DZA65_RS00455	0.17	-2.2
109,811	-		DZA65_RS00455	0.17	-1.4
109,842	+		DZA65_RS00455	0.20	-0.6
109,842	+		DZA65_RS00455	0.20	-1.4
109,842	+		DZA65_RS00455	0.20	+0.3
109,842	+		DZA65_RS00455	0.20	-0.4
109,842	+		DZA65_RS00455	0.20	-1.3
109,863	+		DZA65_RS00455	0.22	+0.0
109,905	+		DZA65_RS00455	0.25	-0.4
109,905	+		DZA65_RS00455	0.25	+0.6
109,905	+		DZA65_RS00455	0.25	+0.0
109,905	+		DZA65_RS00455	0.25	+1.1
109,905	+		DZA65_RS00455	0.25	-0.9
109,905	+		DZA65_RS00455	0.25	+1.6
109,905	+		DZA65_RS00455	0.25	+1.0
109,905	+		DZA65_RS00455	0.25	-2.0
109,906	-		DZA65_RS00455	0.25	-1.2
109,906	-		DZA65_RS00455	0.25	+4.1
109,906	-		DZA65_RS00455	0.25	-0.9
109,906	-		DZA65_RS00455	0.25	-0.1
109,906	-		DZA65_RS00455	0.25	-0.6
109,906	-		DZA65_RS00455	0.25	-1.0
109,906	-		DZA65_RS00455	0.25	-0.4
110,017	+				+0.2
110,018	-		DZA65_RS00455	0.35	-0.7
110,095	-				-0.4
110,194	+		DZA65_RS00455	0.50	-1.3
110,194	+		DZA65_RS00455	0.50	+1.2
110,194	+		DZA65_RS00455	0.50	-1.6
110,194	+		DZA65_RS00455	0.50	-2.0
110,194	+		DZA65_RS00455	0.50	-0.9
110,194	+		DZA65_RS00455	0.50	-0.4
110,195	-		DZA65_RS00455	0.51	-1.4
110,195	-		DZA65_RS00455	0.51	-1.0
110,195	-		DZA65_RS00455	0.51	-0.0
110,195	-		DZA65_RS00455	0.51	-0.7
110,320	-		DZA65_RS00455	0.61	+1.2
110,419	+		DZA65_RS00455	0.70	-0.4
110,535	+		DZA65_RS00455	0.80	-0.3
110,535	+		DZA65_RS00455	0.80	+1.2
110,536	-		DZA65_RS00455	0.80	-1.2
110,536	-		DZA65_RS00455	0.80	-1.0
110,560	+		DZA65_RS00455	0.82	+0.6
110,560	+		DZA65_RS00455	0.82	+2.2
110,560	+		DZA65_RS00455	0.82	-1.0
110,560	+		DZA65_RS00455	0.82	+0.5
110,561	-		DZA65_RS00455	0.82	+0.2
110,561	-		DZA65_RS00455	0.82	+0.1
110,562	+		DZA65_RS00455	0.82	-1.2
110,563	-		DZA65_RS00455	0.82	-1.7
110,563	-		DZA65_RS00455	0.82	-2.1
110,563	-		DZA65_RS00455	0.82	-1.6
110,563	-		DZA65_RS00455	0.82	-0.2
110,578	-		DZA65_RS00455	0.84	-0.9
110,622	+		DZA65_RS00455	0.88	-1.2
110,622	+		DZA65_RS00455	0.88	+1.6
110,622	+		DZA65_RS00455	0.88	-0.4
110,622	+		DZA65_RS00455	0.88	-2.1
110,623	-		DZA65_RS00455	0.88	-0.7
110,623	-		DZA65_RS00455	0.88	+2.3
110,623	-		DZA65_RS00455	0.88	+0.6
110,623	-		DZA65_RS00455	0.88	-1.4
110,623	-		DZA65_RS00455	0.88	+1.6
110,623	-		DZA65_RS00455	0.88	+1.0
110,632	+		DZA65_RS00455	0.88	-1.7
110,632	+		DZA65_RS00455	0.88	+2.2
110,632	+		DZA65_RS00455	0.88	-1.6
110,632	+		DZA65_RS00455	0.88	-0.7
110,633	-		DZA65_RS00455	0.89	-0.1
110,633	-		DZA65_RS00455	0.89	-1.0
110,633	-		DZA65_RS00455	0.89	-3.1
110,633	-		DZA65_RS00455	0.89	-0.9
110,633	-		DZA65_RS00455	0.89	-0.9
110,633	-		DZA65_RS00455	0.89	+1.1
110,633	-		DZA65_RS00455	0.89	-1.1
110,634	+		DZA65_RS00455	0.89	-1.5
110,634	+		DZA65_RS00455	0.89	+0.4
110,635	-		DZA65_RS00455	0.89	-0.4
110,635	-		DZA65_RS00455	0.89	-0.0
110,635	-		DZA65_RS00455	0.89	-4.4
110,635	-		DZA65_RS00455	0.89	-0.0
110,635	-		DZA65_RS00455	0.89	-0.4
110,635	-		DZA65_RS00455	0.89	-0.7
110,635	-		DZA65_RS00455	0.89	-0.0
110,635	-		DZA65_RS00455	0.89	+1.9
110,635	-		DZA65_RS00455	0.89	-1.6
110,684	+				-1.0
110,684	+				+1.6
110,685	-				-1.0
110,735	+				-0.7
110,736	-				-0.4
110,736	-				+3.2
110,738	+				+0.6
110,738	+				-1.7
110,738	+				+0.3
110,739	-				-1.4
110,739	-				-1.0
110,739	-				+1.8
110,739	-				+1.6
110,739	-				-2.4
110,739	-				-1.3
110,739	-				+0.3
110,739	-				-0.9
110,739	-				-0.5
110,739	-				-1.1
110,743	+				+0.4
110,743	+				+0.4
110,744	-				-0.4
110,744	-				-0.7
110,744	-				-1.0
110,744	-				-1.0
110,744	-				-1.9
110,744	-				-1.0
110,752	+				-1.7
110,752	+				-1.6
110,752	+				-1.2
110,752	+				-1.4
110,753	-				-0.0
110,753	-				-0.7
110,753	-				-0.8
110,777	+				-2.0
110,795	+				-3.2
110,809	+				-0.7
110,809	+				-0.7
110,809	+				-0.4
110,809	+				-2.0
110,810	-				+1.0
110,813	+				-0.0
110,813	+				-1.4
110,813	+				-1.6
110,813	+				-1.0
110,813	+				-1.7
110,813	+				+1.6
110,813	+				-0.0
110,813	+				+1.2
110,813	+				-0.0
110,813	+				-1.0
110,813	+				-1.4
110,813	+				-1.7
110,814	-				+1.2
110,814	-				-0.0
110,814	-				-1.4
110,814	-				-0.7
110,814	-				+0.3
110,814	-				-0.0
110,817	+				-0.4
110,817	+				-0.7
110,817	+				-0.3
110,817	+				-1.4
110,817	+				+0.8
110,817	+				+1.0
110,818	-				-0.7
110,831	+				-0.0
110,831	+				-0.6
110,831	+				+1.6
110,842	+				-2.0
110,842	+				-0.0
110,842	+				-0.0
110,890	+				-1.2
110,890	+				-1.3
110,890	+				-1.7
110,890	+				-1.4
110,890	+				-0.6
110,890	+				+1.0
110,975	+		DZA65_RS00460	0.12	-1.4
111,004	+		DZA65_RS00460	0.15	+2.1
111,004	+		DZA65_RS00460	0.15	-0.6
111,004	+		DZA65_RS00460	0.15	-1.7
111,089	+		DZA65_RS00460	0.24	+2.0
111,110	+		DZA65_RS00460	0.27	-1.0
111,110	+		DZA65_RS00460	0.27	-0.9
111,110	+		DZA65_RS00460	0.27	-0.7
111,110	+		DZA65_RS00460	0.27	+0.2
111,110	+		DZA65_RS00460	0.27	-0.0
111,123	+		DZA65_RS00460	0.28	+1.6
111,123	+		DZA65_RS00460	0.28	-0.3
111,175	+		DZA65_RS00460	0.34	+1.6
111,175	+		DZA65_RS00460	0.34	-1.2
111,175	+		DZA65_RS00460	0.34	+0.2
111,175	+		DZA65_RS00460	0.34	-2.2
111,175	+		DZA65_RS00460	0.34	+0.6
111,175	+		DZA65_RS00460	0.34	-1.4
111,175	+		DZA65_RS00460	0.34	-1.2
111,175	+		DZA65_RS00460	0.34	-1.8
111,175	+		DZA65_RS00460	0.34	-1.4
111,175	+		DZA65_RS00460	0.34	-0.4
111,175	+		DZA65_RS00460	0.34	+1.0
111,175	+		DZA65_RS00460	0.34	+1.6
111,175	+		DZA65_RS00460	0.34	-0.4
111,176	-		DZA65_RS00460	0.34	-1.2
111,176	-		DZA65_RS00460	0.34	-0.0
111,176	-		DZA65_RS00460	0.34	-1.8
111,176	-		DZA65_RS00460	0.34	-0.4
111,176	-		DZA65_RS00460	0.34	+1.6
111,176	-		DZA65_RS00460	0.34	-1.7
111,176	-		DZA65_RS00460	0.34	-0.4
111,176	-		DZA65_RS00460	0.34	+1.0
111,176	-		DZA65_RS00460	0.34	-0.2
111,176	-		DZA65_RS00460	0.34	-0.0
111,375	+		DZA65_RS00460	0.55	-1.0
111,375	+		DZA65_RS00460	0.55	+1.1
111,375	+		DZA65_RS00460	0.55	+0.6
111,375	+		DZA65_RS00460	0.55	-0.7
111,375	+		DZA65_RS00460	0.55	-0.6
111,376	-		DZA65_RS00460	0.55	-0.7
111,452	+		DZA65_RS00460	0.64	+1.9
111,452	+		DZA65_RS00460	0.64	-1.7
111,452	+		DZA65_RS00460	0.64	+0.3
111,452	+		DZA65_RS00460	0.64	-0.4
111,540	+		DZA65_RS00460	0.73	-1.2
111,540	+		DZA65_RS00460	0.73	+0.1
111,541	-		DZA65_RS00460	0.73	+0.1
111,541	-		DZA65_RS00460	0.73	-1.7
111,545	+		DZA65_RS00460	0.74	-0.1
111,545	+		DZA65_RS00460	0.74	-1.4
111,546	-		DZA65_RS00460	0.74	-0.2
111,663	+		DZA65_RS00460	0.86	-0.9
111,664	-		DZA65_RS00460	0.86	-2.7
111,690	+		DZA65_RS00460	0.89	-0.9
111,690	+		DZA65_RS00460	0.89	-1.2
111,690	+		DZA65_RS00460	0.89	-1.3
111,690	+		DZA65_RS00460	0.89	+1.1
111,690	+		DZA65_RS00460	0.89	+0.6
111,690	+		DZA65_RS00460	0.89	-0.7
111,690	+		DZA65_RS00460	0.89	-1.2
111,690	+		DZA65_RS00460	0.89	-1.0
111,690	+		DZA65_RS00460	0.89	-1.6
111,690	+		DZA65_RS00460	0.89	-2.0
111,690	+		DZA65_RS00460	0.89	+0.2
111,690	+		DZA65_RS00460	0.89	+0.6
111,690	+		DZA65_RS00460	0.89	+1.0
111,690	+		DZA65_RS00460	0.89	-0.3
111,690	+		DZA65_RS00460	0.89	+1.6
111,690	+				-1.2
111,690	+		DZA65_RS00460	0.89	-1.0
111,691	-		DZA65_RS00460	0.89	+1.6
111,691	-		DZA65_RS00460	0.89	-1.5
111,691	-		DZA65_RS00460	0.89	-0.0
111,691	-		DZA65_RS00460	0.89	-0.2
111,691	-		DZA65_RS00460	0.89	-1.0
111,691	-		DZA65_RS00460	0.89	-3.0
111,691	-		DZA65_RS00460	0.89	-1.7
111,691	-		DZA65_RS00460	0.89	-1.2
111,691	-		DZA65_RS00460	0.89	-0.4
111,691	-		DZA65_RS00460	0.89	-1.2
111,691	-		DZA65_RS00460	0.89	-1.6
111,691	-		DZA65_RS00460	0.89	+1.0
111,691	-		DZA65_RS00460	0.89	-0.8
111,691	-		DZA65_RS00460	0.89	-1.7
111,691	-		DZA65_RS00460	0.89	-1.4
111,691	-		DZA65_RS00460	0.89	+1.6
111,691	-		DZA65_RS00460	0.89	-2.2
111,691	-		DZA65_RS00460	0.89	+0.4
111,691	-		DZA65_RS00460	0.89	-1.2
111,692	+		DZA65_RS00460	0.90	-1.9
111,692	+		DZA65_RS00460	0.90	-1.0
111,692	+		DZA65_RS00460	0.90	+3.6
111,692	+		DZA65_RS00460	0.90	-1.2
111,692	+		DZA65_RS00460	0.90	+0.2
111,693	-		DZA65_RS00460	0.90	-1.0
111,693	-		DZA65_RS00460	0.90	-1.4
111,693	-		DZA65_RS00460	0.90	+0.6
111,741	+				-1.3
111,742	-				-1.6
111,742	-				+0.3
111,742	-				-1.9
111,742	-				-1.2
111,742	-				-0.0
111,742	-				-1.0
111,742	-				-1.4
111,742	-				-0.7