Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21080

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
4,556,103	+		DZA65_RS21075	0.46	+1.5
4,556,272	-		DZA65_RS21075	0.64	+1.5
4,556,310	+		DZA65_RS21075	0.68	-1.7
4,556,310	+		DZA65_RS21075	0.68	-0.8
4,556,376	+		DZA65_RS21075	0.75	-0.8
4,556,776	-				+0.5
4,556,776	-				+2.0
4,556,795	-				-1.0
4,556,795	-				-0.8
4,556,795	-				-1.8
4,556,795	-				-2.0
4,556,802	-				-1.4
4,556,807	-				-0.1
4,556,874	-				-0.8
4,556,915	+				+0.6
4,556,915	+				+0.2
4,556,915	+				-0.4
4,556,915	+				-1.3
4,556,915	+				-0.4
4,556,916	-				+1.2
4,556,916	-				-0.8
4,556,916	-				+0.9
4,556,932	+				+1.0
4,556,933	-				-0.1
4,556,933	-				-0.8
4,556,985	+				+0.2
4,556,985	+				-1.1
4,556,986	-				+0.6
4,556,987	+				+1.0
4,556,987	+				+0.3
4,556,987	+				-0.8
4,556,988	-				-1.8
4,556,988	-				-2.1
4,556,988	-				-0.4
4,556,988	-				-1.4
4,556,988	-				+1.2
4,557,007	-				-0.6
4,557,085	+				+0.5
4,557,085	+				+0.4
4,557,086	-				+0.9
4,557,086	-				-1.1
4,557,086	-				-1.1
4,557,136	+				-1.4
4,557,136	+				+0.8
4,557,136	+				+0.6
4,557,136	+				+0.2
4,557,136	+				+1.2
4,557,136	+				-1.4
4,557,136	+				-0.8
4,557,136	+				-2.0
4,557,136	+				-2.1
4,557,136	+				-1.0
4,557,137	-				-2.9
4,557,137	-				-1.3
4,557,137	-				-0.8
4,557,137	-				-1.7
4,557,137	-				-1.0
4,557,137	-				-0.4
4,557,138	+				-0.4
4,557,139	-				-2.5
4,557,139	-				+1.2
4,557,139	-				-1.8
4,557,215	+		DZA65_RS21080	0.11	-1.8
4,557,215	+		DZA65_RS21080	0.11	+1.2
4,557,216	-				-1.4
4,557,270	+		DZA65_RS21080	0.13	-1.2
4,557,270	+		DZA65_RS21080	0.13	-1.6
4,557,271	-		DZA65_RS21080	0.13	-1.4
4,557,307	-		DZA65_RS21080	0.15	-1.4
4,557,586	-		DZA65_RS21080	0.28	-1.1
4,557,586	-		DZA65_RS21080	0.28	+1.8
4,557,666	+		DZA65_RS21080	0.32	-0.8
4,557,666	+		DZA65_RS21080	0.32	+0.2
4,557,666	+		DZA65_RS21080	0.32	-0.8
4,557,666	+		DZA65_RS21080	0.32	+0.6
4,557,667	-		DZA65_RS21080	0.32	+0.5
4,557,667	-		DZA65_RS21080	0.32	+0.2
4,557,667	-		DZA65_RS21080	0.32	+0.2
4,557,667	-		DZA65_RS21080	0.32	-0.4
4,557,667	-		DZA65_RS21080	0.32	-1.1
4,557,710	+		DZA65_RS21080	0.34	+2.2
4,557,710	+		DZA65_RS21080	0.34	-0.8
4,557,710	+		DZA65_RS21080	0.34	+3.6
4,557,711	-		DZA65_RS21080	0.34	-0.4
4,557,711	-		DZA65_RS21080	0.34	+0.2
4,557,711	-		DZA65_RS21080	0.34	-0.4
4,557,711	-		DZA65_RS21080	0.34	-0.8
4,557,966	+		DZA65_RS21080	0.45	+0.2
4,557,967	-		DZA65_RS21080	0.45	+1.2
4,558,017	+		DZA65_RS21080	0.48	-1.1
4,558,017	+		DZA65_RS21080	0.48	-2.4
4,558,018	-		DZA65_RS21080	0.48	-1.3
4,558,185	+		DZA65_RS21080	0.56	-0.4
4,558,185	+		DZA65_RS21080	0.56	+1.0
4,558,186	-		DZA65_RS21080	0.56	-0.8
4,558,249	+		DZA65_RS21080	0.58	-0.5
4,558,358	-		DZA65_RS21080	0.64	-3.3
4,558,386	+		DZA65_RS21080	0.65	-2.6
4,558,386	+		DZA65_RS21080	0.65	-2.7
4,558,504	+		DZA65_RS21080	0.70	-2.3
4,558,532	-		DZA65_RS21080	0.72	-1.2
4,558,532	-		DZA65_RS21080	0.72	-1.6
4,558,626	+		DZA65_RS21080	0.76	+1.2
4,558,626	+		DZA65_RS21080	0.76	-0.4
4,558,627	-		DZA65_RS21080	0.76	+0.6
4,558,627	-		DZA65_RS21080	0.76	-1.6
4,558,627	-		DZA65_RS21080	0.76	-1.1
4,558,630	+				-0.8
4,558,630	+		DZA65_RS21080	0.76	-0.1
4,558,630	+		DZA65_RS21080	0.76	-0.8
4,558,631	-		DZA65_RS21080	0.76	+0.2
4,558,631	-		DZA65_RS21080	0.76	+1.0
4,558,631	-		DZA65_RS21080	0.76	-3.6
4,558,631	-		DZA65_RS21080	0.76	-0.1
4,558,631	-		DZA65_RS21080	0.76	+0.2
4,558,662	+		DZA65_RS21080	0.78	-0.8
4,558,713	+		DZA65_RS21080	0.80	+0.2
4,558,713	+		DZA65_RS21080	0.80	+0.7
4,558,713	+		DZA65_RS21080	0.80	+0.5
4,558,714	-		DZA65_RS21080	0.80	-0.4
4,558,714	-		DZA65_RS21080	0.80	+2.3
4,558,714	-		DZA65_RS21080	0.80	-0.4
4,559,066	+				-1.1
4,559,110	+				+0.2
4,559,138	+				-1.6
4,559,138	+				-1.6
4,559,138	+				-1.2
4,559,138	+				-0.6
4,559,139	-				-3.1
4,559,139	-				-1.4
4,559,139	-				-2.1
4,559,146	+				+0.7
4,559,147	-				-1.4
4,559,234	+				+0.2
4,559,234	+				-0.1
4,559,234	+				-0.8
4,559,234	+				-1.5
4,559,234	+				-1.2
4,559,235	-				-0.8
4,559,235	-				-0.4
4,559,236	+				-0.6
4,559,236	+				-2.5
4,559,237	-				+0.4
4,559,328	+		DZA65_RS21085	0.13	-1.6
4,559,329	-		DZA65_RS21085	0.13	+1.5
4,559,344	+		DZA65_RS21085	0.15	-0.8
4,559,345	-				+1.2
4,559,345	-		DZA65_RS21085	0.16	+1.2
4,559,345	-		DZA65_RS21085	0.16	-0.4
4,559,358	+		DZA65_RS21085	0.17	-1.0
4,559,444	+		DZA65_RS21085	0.29	+1.6
4,559,444	+		DZA65_RS21085	0.29	+0.5
4,559,444	+		DZA65_RS21085	0.29	-0.8
4,559,444	+		DZA65_RS21085	0.29	-0.4
4,559,444	+		DZA65_RS21085	0.29	+0.3
4,559,444	+		DZA65_RS21085	0.29	+0.2
4,559,444	+		DZA65_RS21085	0.29	-0.4
4,559,444	+		DZA65_RS21085	0.29	-1.0
4,559,444	+		DZA65_RS21085	0.29	+1.8
4,559,444	+		DZA65_RS21085	0.29	+0.9
4,559,444	+		DZA65_RS21085	0.29	+1.3
4,559,444	+		DZA65_RS21085	0.29	+0.7
4,559,444	+		DZA65_RS21085	0.29	+1.2
4,559,444	+		DZA65_RS21085	0.29	-2.5
4,559,444	+		DZA65_RS21085	0.29	+0.1
4,559,444	+		DZA65_RS21085	0.29	+2.1
4,559,444	+		DZA65_RS21085	0.29	-2.9
4,559,444	+		DZA65_RS21085	0.29	+0.8
4,559,444	+		DZA65_RS21085	0.29	+0.2
4,559,444	+		DZA65_RS21085	0.29	+0.5
4,559,445	-		DZA65_RS21085	0.30	+0.6
4,559,445	-				+0.8
4,559,445	-		DZA65_RS21085	0.30	-1.1
4,559,445	-		DZA65_RS21085	0.30	+0.2
4,559,445	-		DZA65_RS21085	0.30	+1.2
4,559,445	-		DZA65_RS21085	0.30	+1.8
4,559,445	-		DZA65_RS21085	0.30	-0.8
4,559,445	-		DZA65_RS21085	0.30	-1.4
4,559,445	-		DZA65_RS21085	0.30	-1.6
4,559,445	-		DZA65_RS21085	0.30	-1.0
4,559,445	-		DZA65_RS21085	0.30	-1.3
4,559,445	-		DZA65_RS21085	0.30	-1.6
4,559,445	-		DZA65_RS21085	0.30	+1.6
4,559,445	-		DZA65_RS21085	0.30	-1.6
4,559,448	+		DZA65_RS21085	0.30	+1.8
4,559,448	+		DZA65_RS21085	0.30	+0.7
4,559,448	+		DZA65_RS21085	0.30	+0.8
4,559,448	+		DZA65_RS21085	0.30	-0.1
4,559,448	+		DZA65_RS21085	0.30	-0.4
4,559,448	+		DZA65_RS21085	0.30	-0.4
4,559,448	+		DZA65_RS21085	0.30	+0.6
4,559,448	+		DZA65_RS21085	0.30	+0.7
4,559,448	+		DZA65_RS21085	0.30	+0.8
4,559,448	+		DZA65_RS21085	0.30	+0.7
4,559,448	+		DZA65_RS21085	0.30	+1.2
4,559,448	+		DZA65_RS21085	0.30	+0.5
4,559,448	+		DZA65_RS21085	0.30	+0.0
4,559,448	+		DZA65_RS21085	0.30	-2.1
4,559,448	+		DZA65_RS21085	0.30	+0.5
4,559,448	+		DZA65_RS21085	0.30	-1.1
4,559,448	+		DZA65_RS21085	0.30	-0.8
4,559,449	-		DZA65_RS21085	0.30	+0.2
4,559,449	-		DZA65_RS21085	0.30	+1.3
4,559,449	-		DZA65_RS21085	0.30	-1.1
4,559,449	-		DZA65_RS21085	0.30	-0.6
4,559,449	-		DZA65_RS21085	0.30	-1.1
4,559,449	-		DZA65_RS21085	0.30	+0.2
4,559,449	-		DZA65_RS21085	0.30	-0.0
4,559,449	-		DZA65_RS21085	0.30	-0.4
4,559,449	-		DZA65_RS21085	0.30	+0.5
4,559,449	-		DZA65_RS21085	0.30	+1.3
4,559,449	-		DZA65_RS21085	0.30	+1.2
4,559,449	-		DZA65_RS21085	0.30	+1.2
4,559,449	-		DZA65_RS21085	0.30	-0.8
4,559,449	-		DZA65_RS21085	0.30	+0.8
4,559,449	-		DZA65_RS21085	0.30	-2.0
4,559,449	-		DZA65_RS21085	0.30	+1.1
4,559,449	-		DZA65_RS21085	0.30	+2.0
4,559,449	-		DZA65_RS21085	0.30	-0.4
4,559,449	-		DZA65_RS21085	0.30	-2.4
4,559,449	-		DZA65_RS21085	0.30	+0.4
4,559,449	-		DZA65_RS21085	0.30	-1.6
4,559,449	-		DZA65_RS21085	0.30	-0.8
4,559,449	-		DZA65_RS21085	0.30	+1.3
4,559,449	-		DZA65_RS21085	0.30	+1.4
4,559,449	-		DZA65_RS21085	0.30	+0.7
4,559,449	-		DZA65_RS21085	0.30	-0.4
4,559,449	-		DZA65_RS21085	0.30	+0.7
4,559,449	-		DZA65_RS21085	0.30	+0.4
4,559,449	-		DZA65_RS21085	0.30	-0.8
4,559,449	-		DZA65_RS21085	0.30	-0.1
4,559,449	-		DZA65_RS21085	0.30	-1.9
4,559,449	-				+0.5
4,559,449	-		DZA65_RS21085	0.30	+0.9
4,559,449	-		DZA65_RS21085	0.30	+0.8
4,559,493	+		DZA65_RS21085	0.36	+0.6
4,559,494	-		DZA65_RS21085	0.36	-0.5
4,559,504	+		DZA65_RS21085	0.38	+0.3
4,559,505	-		DZA65_RS21085	0.38	+0.2
4,559,710	+		DZA65_RS21085	0.67	-0.6
4,559,710	+		DZA65_RS21085	0.67	+0.2
4,559,710	+		DZA65_RS21085	0.67	+0.2
4,559,710	+		DZA65_RS21085	0.67	-2.5
4,559,711	-		DZA65_RS21085	0.67	-1.4
4,559,711	-		DZA65_RS21085	0.67	-1.3
4,559,711	-		DZA65_RS21085	0.67	-0.3
4,559,711	-		DZA65_RS21085	0.67	-2.4
4,559,711	-		DZA65_RS21085	0.67	+0.2
4,559,744	+		DZA65_RS21085	0.71	+0.9
4,559,744	+		DZA65_RS21085	0.71	+1.3
4,559,745	-		DZA65_RS21085	0.71	+0.6
4,559,825	+		DZA65_RS21085	0.83	+1.7
4,559,825	+		DZA65_RS21085	0.83	+0.2
4,559,826	-		DZA65_RS21085	0.83	-1.6
4,559,876	+		DZA65_RS21085	0.90	+1.1
4,559,876	+		DZA65_RS21085	0.90	+2.5
4,559,876	+		DZA65_RS21085	0.90	-1.1
4,559,876	+		DZA65_RS21085	0.90	-1.0
4,559,876	+		DZA65_RS21085	0.90	+0.6
4,559,876	+		DZA65_RS21085	0.90	-0.6
4,559,876	+		DZA65_RS21085	0.90	-1.1
4,559,876	+		DZA65_RS21085	0.90	-0.8
4,559,876	+		DZA65_RS21085	0.90	-1.6
4,559,876	+		DZA65_RS21085	0.90	-0.8
4,559,877	-		DZA65_RS21085	0.90	+0.7
4,559,877	-		DZA65_RS21085	0.90	+0.5
4,559,877	-		DZA65_RS21085	0.90	+0.2
4,559,877	-		DZA65_RS21085	0.90	+0.6
4,559,877	-		DZA65_RS21085	0.90	-0.8
4,559,877	-		DZA65_RS21085	0.90	+1.3
4,559,877	-		DZA65_RS21085	0.90	-1.7
4,559,877	-		DZA65_RS21085	0.90	+2.0
4,559,877	-		DZA65_RS21085	0.90	-0.2
4,559,877	-		DZA65_RS21085	0.90	+1.8
4,559,881	-				+1.5
4,559,881	-				+0.2
4,559,881	-				+1.2
4,559,881	-				-0.1
4,559,886	-				+0.8
4,559,886	-				-2.0
4,559,886	-				-0.4
4,559,945	+				+0.6
4,559,945	+				+2.2
4,559,945	+				+1.2
4,559,945	+				+1.6
4,559,946	-				+1.0
4,559,946	-				-0.4
4,559,946	-				-1.4
4,559,946	-				+1.5
4,559,946	-				+1.6
4,559,957	+				+2.5
4,559,958	-				-0.1
4,559,990	-				-1.6
4,560,048	-				+1.2
4,560,129	-		DZA65_RS21090	0.20	-0.4