Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS20770

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
4,480,951	-				+0.7
4,480,992	-				-0.2
4,480,992	-				-1.0
4,480,992	-				-1.7
4,481,009	-				+0.4
4,481,031	-				-1.2
4,481,031	-				-0.4
4,481,072	-				-1.7
4,481,072	-				-0.2
4,481,114	+				-1.2
4,481,128	-				+1.2
4,481,138	+				-0.4
4,481,139	-				-0.6
4,481,139	-				+1.2
4,481,139	-				+2.5
4,481,159	+				+1.4
4,481,159	+				-0.4
4,481,160	-				-0.4
4,481,160	-				+0.6
4,481,201	+				+0.2
4,481,202	-				-1.2
4,481,202	-				-0.8
4,481,202	-				-2.2
4,481,202	-				-1.4
4,481,212	+				+0.9
4,481,212	+				+2.9
4,481,212	+				-1.2
4,481,212	+				+2.2
4,481,213	-				+0.6
4,481,213	-				+0.5
4,481,213	-				-1.8
4,481,225	+				-0.4
4,481,225	+				+0.6
4,481,225	+				+1.2
4,481,225	+				-0.8
4,481,225	+				+1.2
4,481,225	+				+1.2
4,481,225	+				+1.2
4,481,225	+				+1.2
4,481,225	+				-0.1
4,481,226	-				+2.3
4,481,226	-				-0.7
4,481,226	-				+1.0
4,481,226	-				+1.6
4,481,226	-				+0.3
4,481,226	-				-0.5
4,481,259	+				+0.3
4,481,259	+				-1.7
4,481,259	+				-2.2
4,481,259	+				+0.2
4,481,259	+				-0.8
4,481,259	+				-1.7
4,481,259	+				-2.0
4,481,260	-				+0.4
4,481,260	-				-1.4
4,481,260	-				-0.8
4,481,260	-				-0.3
4,481,260	-				-1.7
4,481,260	-				-1.7
4,481,260	-				-0.2
4,481,260	-				-0.2
4,481,260	-				-1.7
4,481,260	-				-2.0
4,481,260	-				-1.7
4,481,260	-				-0.4
4,481,260	-				-0.9
4,481,260	-				+0.0
4,481,260	-				-0.6
4,481,260	-				-0.4
4,481,264	+				+0.2
4,481,264	+				+0.2
4,481,265	-				-1.4
4,481,265	-				+0.2
4,481,298	+				-1.2
4,481,298	+				-2.4
4,481,298	+				-0.4
4,481,298	+				+0.2
4,481,298	+				+0.3
4,481,298	+				-2.2
4,481,299	-				-0.8
4,481,299	-				-0.2
4,481,299	-				-0.3
4,481,302	+				-1.0
4,481,302	+				+1.2
4,481,303	-				+0.5
4,481,303	-				+1.1
4,481,303	-				+0.6
4,481,303	-				+1.0
4,481,303	-				+2.8
4,481,303	-				+1.2
4,481,362	+				+1.7
4,481,362	+				+3.5
4,481,363	-				+0.8
4,481,453	+				+0.6
4,481,454	-				+0.9
4,481,454	-				+2.7
4,481,454	-				+1.7
4,481,454	-				-0.4
4,481,454	-				+4.0
4,481,636	+		DZA65_RS20770	0.18	+1.0
4,481,649	+		DZA65_RS20770	0.19	+0.2
4,481,649	+		DZA65_RS20770	0.19	+0.2
4,481,649	+		DZA65_RS20770	0.19	-0.7
4,481,650	-		DZA65_RS20770	0.19	-0.4
4,481,650	-		DZA65_RS20770	0.19	-1.8
4,481,717	+		DZA65_RS20770	0.24	-0.1
4,481,717	+		DZA65_RS20770	0.24	+1.0
4,481,811	+		DZA65_RS20770	0.31	-1.2
4,482,065	+		DZA65_RS20770	0.50	-0.2
4,482,066	-		DZA65_RS20770	0.51	+0.2
4,482,080	+		DZA65_RS20770	0.52	-1.0
4,482,108	-		DZA65_RS20770	0.54	-2.2
4,482,123	+		DZA65_RS20770	0.55	-1.2
4,482,123	+		DZA65_RS20770	0.55	+0.5
4,482,123	+		DZA65_RS20770	0.55	+0.0
4,482,124	-		DZA65_RS20770	0.55	+0.5
4,482,124	-		DZA65_RS20770	0.55	+3.1
4,482,124	-		DZA65_RS20770	0.55	+0.2
4,482,124	-		DZA65_RS20770	0.55	+0.2
4,482,124	-		DZA65_RS20770	0.55	-0.8
4,482,124	-		DZA65_RS20770	0.55	+0.2
4,482,206	+		DZA65_RS20770	0.61	+0.3
4,482,207	-		DZA65_RS20770	0.61	+3.2
4,482,207	-		DZA65_RS20770	0.61	-0.8
4,482,207	-		DZA65_RS20770	0.61	-2.9
4,482,207	-		DZA65_RS20770	0.61	+0.0
4,482,207	-		DZA65_RS20770	0.61	+1.2
4,482,249	+		DZA65_RS20770	0.65	-0.8
4,482,249	+		DZA65_RS20770	0.65	+1.2
4,482,250	-		DZA65_RS20770	0.65	+0.2
4,482,250	-		DZA65_RS20770	0.65	-1.7
4,482,279	+		DZA65_RS20770	0.67	-1.1
4,482,282	+		DZA65_RS20770	0.67	+0.9
4,482,282	+		DZA65_RS20770	0.67	-0.1
4,482,282	+		DZA65_RS20770	0.67	+0.5
4,482,282	+		DZA65_RS20770	0.67	-0.6
4,482,283	-		DZA65_RS20770	0.67	-1.2
4,482,283	-		DZA65_RS20770	0.67	-1.3
4,482,283	-		DZA65_RS20770	0.67	+0.7
4,482,283	-		DZA65_RS20770	0.67	-3.2
4,482,283	-		DZA65_RS20770	0.67	+0.2
4,482,283	-		DZA65_RS20770	0.67	+0.8
4,482,283	-		DZA65_RS20770	0.67	+0.2
4,482,301	+		DZA65_RS20770	0.69	+0.4
4,482,301	+		DZA65_RS20770	0.69	+1.5
4,482,389	+		DZA65_RS20770	0.75	-0.2
4,482,389	+		DZA65_RS20770	0.75	-1.9
4,482,389	+		DZA65_RS20770	0.75	+1.0
4,482,390	-		DZA65_RS20770	0.75	-1.7
4,482,390	-		DZA65_RS20770	0.75	-0.9
4,482,390	-		DZA65_RS20770	0.75	+1.6
4,482,390	-		DZA65_RS20770	0.75	+0.4
4,482,390	-		DZA65_RS20770	0.75	-0.7
4,482,391	+		DZA65_RS20770	0.75	-0.8
4,482,391	+		DZA65_RS20770	0.75	+1.0
4,482,391	+		DZA65_RS20770	0.75	+2.2
4,482,391	+		DZA65_RS20770	0.75	-1.7
4,482,391	+		DZA65_RS20770	0.75	-0.3
4,482,391	+		DZA65_RS20770	0.75	+1.3
4,482,391	+		DZA65_RS20770	0.75	+0.2
4,482,391	+		DZA65_RS20770	0.75	+0.9
4,482,391	+		DZA65_RS20770	0.75	-0.3
4,482,392	-		DZA65_RS20770	0.76	-0.3
4,482,392	-		DZA65_RS20770	0.76	+0.2
4,482,392	-		DZA65_RS20770	0.76	+1.2
4,482,392	-		DZA65_RS20770	0.76	+0.6
4,482,392	-		DZA65_RS20770	0.76	-0.1
4,482,392	-		DZA65_RS20770	0.76	+1.9
4,482,392	-		DZA65_RS20770	0.76	+1.3
4,482,392	-		DZA65_RS20770	0.76	+0.1
4,482,392	-		DZA65_RS20770	0.76	-2.2
4,482,392	-		DZA65_RS20770	0.76	-0.8
4,482,458	+		DZA65_RS20770	0.81	-0.3
4,482,458	+		DZA65_RS20770	0.81	-0.5
4,482,458	+		DZA65_RS20770	0.81	-0.1
4,482,458	+		DZA65_RS20770	0.81	-1.7
4,482,458	+		DZA65_RS20770	0.81	-1.2
4,482,458	+		DZA65_RS20770	0.81	+0.7
4,482,458	+		DZA65_RS20770	0.81	-0.2
4,482,458	+		DZA65_RS20770	0.81	-0.6
4,482,459	-		DZA65_RS20770	0.81	+0.2
4,482,459	-		DZA65_RS20770	0.81	-1.4
4,482,461	+		DZA65_RS20770	0.81	+0.7
4,482,461	+		DZA65_RS20770	0.81	-0.4
4,482,462	-		DZA65_RS20770	0.81	+0.0
4,482,539	+		DZA65_RS20770	0.87	-2.3
4,482,539	+		DZA65_RS20770	0.87	-2.2
4,482,540	-		DZA65_RS20770	0.87	+2.6
4,482,540	-		DZA65_RS20770	0.87	-3.2
4,482,716	-				+0.6
4,482,716	-				+1.2
4,482,722	+				-1.8
4,482,811	+				-1.2
4,482,812	-		DZA65_RS20775	0.24	-2.0
4,482,836	-		DZA65_RS20775	0.30	-0.4
4,482,859	+		DZA65_RS20775	0.37	-1.4
4,483,161	+		DZA65_RS20780	0.14	-0.8
4,483,161	+		DZA65_RS20780	0.14	-0.8
4,483,161	+		DZA65_RS20780	0.14	-1.2
4,483,161	+		DZA65_RS20780	0.14	-0.4
4,483,161	+		DZA65_RS20780	0.14	+1.2
4,483,161	+		DZA65_RS20780	0.14	+1.2
4,483,161	+		DZA65_RS20780	0.14	+0.8
4,483,161	+		DZA65_RS20780	0.14	-0.2
4,483,161	+		DZA65_RS20780	0.14	-2.2
4,483,161	+		DZA65_RS20780	0.14	-2.8
4,483,162	-		DZA65_RS20780	0.14	-0.5
4,483,162	-		DZA65_RS20780	0.14	-0.6
4,483,162	-				-1.2
4,483,162	-		DZA65_RS20780	0.14	+0.2
4,483,226	+		DZA65_RS20780	0.26	+0.2
4,483,227	-		DZA65_RS20780	0.26	+0.2
4,483,237	-		DZA65_RS20780	0.28	-1.2
4,483,309	+		DZA65_RS20780	0.41	-0.1
4,483,309	+		DZA65_RS20780	0.41	-1.0
4,483,309	+		DZA65_RS20780	0.41	-1.2
4,483,309	+		DZA65_RS20780	0.41	-0.8
4,483,310	-		DZA65_RS20780	0.41	+1.4
4,483,310	-		DZA65_RS20780	0.41	+0.2
4,483,310	-		DZA65_RS20780	0.41	+1.5
4,483,536	+		DZA65_RS20780	0.82	-0.5
4,483,573	+		DZA65_RS20780	0.89	-0.7
4,483,574	-		DZA65_RS20780	0.89	+1.4
4,483,574	-		DZA65_RS20780	0.89	-1.4
4,483,585	+				-0.5
4,483,612	+				+1.2
4,483,619	+				-0.3
4,483,670	-				-2.0
4,483,670	-				-0.8
4,483,697	+		DZA65_RS20785	0.12	+0.4
4,483,697	+		DZA65_RS20785	0.12	+0.0
4,483,697	+		DZA65_RS20785	0.12	+1.3
4,483,698	-		DZA65_RS20785	0.12	-0.0
4,483,698	-		DZA65_RS20785	0.12	-1.0