Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14100

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
3,024,349	+				+0.5
3,024,355	+				-0.7
3,024,360	+				-0.4
3,024,360	+				+0.1
3,024,384	+				+1.3
3,024,389	+				-0.6
3,024,408	+				+2.2
3,024,412	+				+1.5
3,024,412	+				-1.1
3,024,412	+				-0.5
3,024,412	+				+0.1
3,024,413	-				-0.1
3,024,416	-				+0.7
3,024,423	+				-0.7
3,024,423	+				-0.9
3,024,424	-				+0.4
3,024,425	+				-0.3
3,024,425	+				+0.2
3,024,425	+				-0.1
3,024,425	+				-0.1
3,024,425	+				-0.7
3,024,425	+				-0.5
3,024,425	+				-2.1
3,024,425	+				+0.2
3,024,425	+				-1.7
3,024,426	-				+0.3
3,024,426	-				-2.7
3,024,426	-				-0.5
3,024,426	-				-2.6
3,024,426	-				-0.2
3,024,426	-				+0.9
3,024,426	-				-0.7
3,024,426	-				-0.7
3,024,426	-				-2.3
3,024,426	-				+0.5
3,024,426	-				+0.9
3,024,447	-				+0.9
3,024,464	+				-2.4
3,024,494	+				+0.9
3,024,495	-				-0.6
3,024,495	-				-0.4
3,024,495	-				-0.6
3,024,495	-				-0.1
3,024,513	+				+0.0
3,024,525	+				-0.2
3,024,528	+				-1.8
3,024,529	-				+0.5
3,024,529	-				-0.1
3,024,529	-				-0.7
3,024,529	-				-0.1
3,024,549	+				-0.5
3,024,550	-				+0.6
3,024,550	-				-0.9
3,024,550	-				-2.7
3,024,565	+				-0.5
3,024,566	-				-0.1
3,024,566	-				+0.3
3,024,617	+				+0.1
3,024,617	+				-0.8
3,024,713	+				+1.5
3,024,713	+				-1.3
3,024,713	+				+1.1
3,024,714	-				+0.9
3,024,719	+				+0.5
3,024,719	+				+0.9
3,024,719	+				+0.9
3,024,720	-				+1.9
3,024,720	-				-1.7
3,024,807	+				-0.1
3,024,865	+				+0.8
3,024,865	+				-1.5
3,024,865	+				+2.9
3,024,866	-				-1.7
3,024,866	-				-0.1
3,024,866	-				+1.1
3,024,866	-				-1.7
3,024,866	-				-0.0
3,024,868	+				+0.6
3,024,869	-				-1.0
3,024,869	-				+1.6
3,024,869	-				-0.3
3,024,890	+				-0.0
3,024,891	-				-1.0
3,024,891	-				-1.5
3,024,891	-				-1.1
3,024,891	-				+0.9
3,024,891	-				+0.5
3,024,950	+				-0.2
3,024,951	-				+2.3
3,024,951	-				-0.9
3,024,983	+				+0.6
3,024,983	+				-1.9
3,024,983	+				-0.7
3,024,983	+				+2.2
3,024,983	+				+1.3
3,024,983	+				+0.2
3,024,983	+				-0.7
3,024,983	+				-1.3
3,024,983	+				-2.5
3,024,983	+				+2.5
3,024,983	+				-1.1
3,024,983	+				-0.1
3,024,984	-				-0.8
3,024,984	-				+1.3
3,024,984	-				+2.0
3,024,984	-				-2.1
3,024,984	-				-1.3
3,024,984	-				-0.7
3,024,984	-				+0.5
3,024,984	-				-0.5
3,024,984	-				+0.3
3,025,017	-				-1.0
3,025,036	+				+1.1
3,025,037	-				-1.6
3,025,037	-				-0.7
3,025,045	-				+0.6
3,025,060	+				-0.7
3,025,060	+				+1.1
3,025,060	+				-0.7
3,025,061	-				+0.9
3,025,061	-				-3.1
3,025,061	-				-1.5
3,025,061	-				-0.9
3,025,061	-				-1.5
3,025,061	-				-0.0
3,025,061	-				-0.1
3,025,061	-				+0.7
3,025,061	-				+0.3
3,025,064	+				+1.2
3,025,064	+				-0.7
3,025,065	-				-2.3
3,025,065	-				-1.1
3,025,065	-				+0.6
3,025,065	-				-0.9
3,025,077	+				-0.3
3,025,137	+				+1.8
3,025,137	+				-0.5
3,025,151	-				-2.1
3,025,151	-				-1.1
3,025,156	-				-2.3
3,025,164	-				-1.9
3,025,164	-				-0.7
3,025,218	+				-0.1
3,025,218	+				+0.9
3,025,219	-				+1.1
3,025,230	+				-0.4
3,025,230	+				-0.7
3,025,231	-				-1.1
3,025,233	+				-1.5
3,025,233	+				-0.4
3,025,233	+				-1.1
3,025,233	+				-2.5
3,025,248	+				+0.1
3,025,248	+				+0.6
3,025,249	-				-0.9
3,025,250	+				+1.9
3,025,251	-				+2.3
3,025,251	-				-0.9
3,025,310	+				+1.9
3,025,322	-				-0.7
3,025,348	+				+0.9
3,025,382	-				-0.1
3,025,443	+				+0.9
3,025,444	-				+0.5
3,025,444	-				-1.5
3,025,561	+		DZA65_RS14100	0.17	-2.1
3,025,561	+		DZA65_RS14100	0.17	-0.7
3,025,562	-		DZA65_RS14100	0.17	+0.9
3,025,562	-		DZA65_RS14100	0.17	+0.7
3,025,562	-		DZA65_RS14100	0.17	+3.1
3,025,562	-		DZA65_RS14100	0.17	-0.1
3,025,562	-		DZA65_RS14100	0.17	+1.4
3,025,562	-		DZA65_RS14100	0.17	-0.7
3,025,562	-		DZA65_RS14100	0.17	+0.2
3,025,562	-		DZA65_RS14100	0.17	-2.5
3,025,568	+		DZA65_RS14100	0.17	-1.1
3,025,568	+		DZA65_RS14100	0.17	+1.6
3,025,569	-		DZA65_RS14100	0.17	+0.1
3,025,569	-		DZA65_RS14100	0.17	+2.0
3,025,571	+		DZA65_RS14100	0.17	-0.1
3,025,572	-		DZA65_RS14100	0.17	-1.8
3,025,626	+		DZA65_RS14100	0.20	+0.6
3,025,626	+		DZA65_RS14100	0.20	+1.5
3,025,644	-		DZA65_RS14100	0.22	-0.5
3,025,666	+		DZA65_RS14100	0.23	-0.0
3,025,683	-		DZA65_RS14100	0.24	-0.1
3,025,689	+		DZA65_RS14100	0.24	+0.9
3,025,689	+		DZA65_RS14100	0.24	-0.9
3,025,690	-		DZA65_RS14100	0.24	+0.5
3,025,690	-		DZA65_RS14100	0.24	-2.6
3,025,698	+		DZA65_RS14100	0.25	+0.5
3,025,698	+		DZA65_RS14100	0.25	+0.9
3,025,698	+		DZA65_RS14100	0.25	-2.7
3,025,699	-		DZA65_RS14100	0.25	+1.5
3,025,699	-		DZA65_RS14100	0.25	-1.5
3,025,699	-		DZA65_RS14100	0.25	+0.5
3,025,699	-		DZA65_RS14100	0.25	-1.9
3,025,727	+		DZA65_RS14100	0.26	-1.0
3,025,728	-		DZA65_RS14100	0.26	-1.5
3,025,759	+		DZA65_RS14100	0.28	+2.9
3,025,759	+		DZA65_RS14100	0.28	-1.1
3,025,760	-		DZA65_RS14100	0.28	-0.5
3,025,760	-				-0.7
3,025,760	-		DZA65_RS14100	0.28	-1.6
3,025,803	+		DZA65_RS14100	0.31	+0.3
3,025,803	+		DZA65_RS14100	0.31	-0.9
3,025,803	+		DZA65_RS14100	0.31	-1.8
3,025,804	-		DZA65_RS14100	0.31	-0.3
3,025,808	+		DZA65_RS14100	0.31	-1.7
3,025,808	+		DZA65_RS14100	0.31	+1.9
3,025,808	+		DZA65_RS14100	0.31	-0.7
3,025,808	+		DZA65_RS14100	0.31	+0.5
3,025,809	-		DZA65_RS14100	0.31	+1.5
3,025,809	-		DZA65_RS14100	0.31	-1.2
3,025,809	-		DZA65_RS14100	0.31	-0.1
3,025,809	-		DZA65_RS14100	0.31	-0.3
3,025,859	+		DZA65_RS14100	0.34	-2.5
3,025,859	+		DZA65_RS14100	0.34	-1.3
3,025,859	+		DZA65_RS14100	0.34	-0.8
3,025,859	+		DZA65_RS14100	0.34	-4.0
3,025,859	+		DZA65_RS14100	0.34	-0.7
3,025,859	+		DZA65_RS14100	0.34	+0.9
3,025,859	+		DZA65_RS14100	0.34	+1.4
3,025,860	-		DZA65_RS14100	0.34	-0.5
3,025,860	-		DZA65_RS14100	0.34	-0.7
3,025,860	-		DZA65_RS14100	0.34	+2.2
3,025,860	-		DZA65_RS14100	0.34	-0.1
3,025,860	-		DZA65_RS14100	0.34	-1.7
3,025,862	+		DZA65_RS14100	0.34	+1.2
3,025,862	+		DZA65_RS14100	0.34	-1.7
3,025,863	-		DZA65_RS14100	0.34	-0.3
3,025,863	-		DZA65_RS14100	0.34	-0.7
3,025,863	-		DZA65_RS14100	0.34	-1.6
3,025,895	+		DZA65_RS14100	0.36	+1.2
3,025,895	+		DZA65_RS14100	0.36	-1.5
3,025,895	+		DZA65_RS14100	0.36	-0.4
3,025,895	+		DZA65_RS14100	0.36	+3.5
3,025,896	-		DZA65_RS14100	0.36	+0.6
3,025,896	-		DZA65_RS14100	0.36	-0.9
3,025,896	-		DZA65_RS14100	0.36	-0.2
3,025,896	-		DZA65_RS14100	0.36	+0.0
3,025,896	-		DZA65_RS14100	0.36	+0.3
3,025,896	-		DZA65_RS14100	0.36	+0.6
3,025,896	-		DZA65_RS14100	0.36	+0.3
3,025,974	-		DZA65_RS14100	0.41	-2.1
3,025,974	-		DZA65_RS14100	0.41	-0.5
3,026,046	+		DZA65_RS14100	0.45	+0.4
3,026,046	+		DZA65_RS14100	0.45	+2.5
3,026,046	+		DZA65_RS14100	0.45	+3.5
3,026,047	-		DZA65_RS14100	0.45	-1.1
3,026,047	-		DZA65_RS14100	0.45	+0.1
3,026,047	-		DZA65_RS14100	0.45	-0.1
3,026,047	-		DZA65_RS14100	0.45	-1.1
3,026,047	-		DZA65_RS14100	0.45	-2.1
3,026,051	+		DZA65_RS14100	0.45	-0.5
3,026,052	-				+0.1
3,026,066	+		DZA65_RS14100	0.46	-2.1
3,026,112	-		DZA65_RS14100	0.49	-1.5
3,026,112	-		DZA65_RS14100	0.49	-1.4
3,026,136	-		DZA65_RS14100	0.50	-0.6
3,026,148	+		DZA65_RS14100	0.51	+1.1
3,026,148	+		DZA65_RS14100	0.51	-0.7
3,026,149	-		DZA65_RS14100	0.51	-1.5
3,026,149	-		DZA65_RS14100	0.51	-1.4
3,026,263	+		DZA65_RS14100	0.57	+1.0
3,026,264	-		DZA65_RS14100	0.57	-0.3
3,026,302	+		DZA65_RS14100	0.60	+2.2
3,026,468	-		DZA65_RS14100	0.69	-0.7
3,026,468	-		DZA65_RS14100	0.69	-0.9
3,026,468	-		DZA65_RS14100	0.69	+2.2
3,026,524	+		DZA65_RS14100	0.72	+1.5
3,026,524	+		DZA65_RS14100	0.72	+0.3
3,026,525	-		DZA65_RS14100	0.73	-1.5
3,026,525	-		DZA65_RS14100	0.73	-1.1
3,026,525	-		DZA65_RS14100	0.73	-1.1
3,026,681	+		DZA65_RS14100	0.82	-1.7
3,026,682	-		DZA65_RS14100	0.82	+1.2
3,026,682	-		DZA65_RS14100	0.82	-0.7
3,026,760	-		DZA65_RS14100	0.86	+0.1
3,026,892	+				+1.2
3,026,892	+				+4.3
3,026,892	+				+0.9
3,026,893	-				-1.1
3,026,981	+				+0.2
3,026,982	-				-0.1
3,027,002	+				+0.1
3,027,002	+				-1.5
3,027,002	+				-0.7
3,027,002	+				-0.9
3,027,002	+				+2.8
3,027,002	+				+1.5
3,027,002	+				-1.3
3,027,002	+				-0.3
3,027,002	+				-0.5
3,027,002	+				-1.1
3,027,003	-				-0.7
3,027,003	-				-2.5
3,027,003	-				-1.9
3,027,003	-				-1.0
3,027,003	-				+0.1
3,027,003	-				-1.5
3,027,003	-				+1.6
3,027,003	-				-0.9
3,027,003	-				+0.2
3,027,003	-				+2.0
3,027,003	-				+1.5
3,027,003	-				-0.5
3,027,003	-				+1.2
3,027,003	-				-0.5
3,027,003	-				-1.2
3,027,085	-		DZA65_RS14105	0.24	+0.2
3,027,087	+		DZA65_RS14105	0.25	+0.3
3,027,087	+		DZA65_RS14105	0.25	+1.5
3,027,087	+		DZA65_RS14105	0.25	-1.7
3,027,087	+		DZA65_RS14105	0.25	-1.9
3,027,088	-		DZA65_RS14105	0.25	-1.3
3,027,088	-		DZA65_RS14105	0.25	+1.2
3,027,140	+		DZA65_RS14105	0.51	-1.7
3,027,141	-		DZA65_RS14105	0.52	-0.0
3,027,141	-		DZA65_RS14105	0.52	+2.0
3,027,193	+		DZA65_RS14105	0.78	+2.8
3,027,194	-		DZA65_RS14105	0.78	-0.0
3,027,211	+		DZA65_RS14105	0.87	-1.9
3,027,229	+				-0.1
3,027,230	-				+0.1
3,027,230	-				+0.6
3,027,230	-				-1.1
3,027,230	-				-0.5
3,027,230	-				-0.5
3,027,230	-				-0.5
3,027,283	+				-0.7
3,027,283	+				-1.5
3,027,283	+				-0.7
3,027,283	+				+1.1
3,027,283	+				+0.1
3,027,283	+				-1.9
3,027,283	+				-1.7
3,027,283	+				-2.1
3,027,284	-				-1.6
3,027,284	-				-1.9
3,027,284	-				-0.5
3,027,284	-				-0.1
3,027,284	-				+2.6
3,027,284	-				+1.1
3,027,284	-				-1.5
3,027,284	-				+1.1
3,027,284	-				-1.1
3,027,376	+				-0.6
3,027,377	-				+0.4
3,027,510	-				+0.4
3,027,510	-				-0.7
3,027,532	+				-0.1
3,027,532	+				-0.0
3,027,532	+				+0.2
3,027,532	+				-2.7
3,027,533	-				+0.6
3,027,533	-				+1.5
3,027,533	-				-0.7
3,027,535	-				-2.5
3,027,575	+				+0.9
3,027,586	+				-0.3
3,027,618	+				+1.3
3,027,621	-				-0.4
3,027,621	-				-0.7
3,027,621	-				-1.1
3,027,621	-				-1.7
3,027,636	+				-2.1
3,027,636	+				+0.2
3,027,643	-				+0.5
3,027,664	+				-0.9
3,027,664	+				-1.2
3,027,665	-				-2.3
3,027,665	-				-3.6
3,027,676	-				+0.9
3,027,677	+				-1.1
3,027,677	+				+0.4
3,027,678	-				+1.7
3,027,678	-				-0.5
3,027,678	-				-1.3
3,027,678	-				-1.1
3,027,717	+				-1.9
3,027,718	-				+0.8
3,027,732	+				+0.2
3,027,733	-				-2.1
3,027,806	+				-1.7
3,027,806	+				-2.3
3,027,814	+				-0.0
3,027,814	+				-1.1
3,027,814	+				-2.3
3,027,815	-				-2.9
3,027,815	-				-1.8
3,027,815	-				+2.0
3,027,818	+				+1.0
3,027,818	+				+0.9
3,027,818	+				+1.3
3,027,818	+				+0.9
3,027,819	-				-0.1
3,027,819	-				+1.6
3,027,819	-				+0.9
3,027,833	+				+2.9
3,027,854	+				-0.7
3,027,855	-				-0.7
3,027,920	+				+0.3
3,027,920	+				+0.3
3,027,921	-				-0.7
3,027,955	+				+0.5
3,027,955	+				-0.7
3,027,955	+				+0.5
3,027,956	-				-1.7
3,027,961	+				+2.1
3,027,961	+				-0.1
3,027,962	-				-1.1
3,027,962	-				+0.5