Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15760

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
3,420,861	+		DZA65_RS15750	0.79	+3.4
3,420,861	+		DZA65_RS15750	0.79	+0.7
3,420,862	-		DZA65_RS15750	0.79	-0.5
3,420,876	+		DZA65_RS15750	0.80	+1.0
3,420,877	-		DZA65_RS15750	0.80	-1.0
3,420,877	-		DZA65_RS15750	0.80	-3.4
3,420,877	-		DZA65_RS15750	0.80	-1.3
3,420,909	-		DZA65_RS15750	0.83	-1.5
3,420,909	-		DZA65_RS15750	0.83	-2.3
3,420,963	+		DZA65_RS15750	0.87	+1.0
3,420,963	+		DZA65_RS15750	0.87	-2.0
3,420,963	+		DZA65_RS15750	0.87	+0.0
3,420,964	-		DZA65_RS15750	0.87	+1.6
3,420,964	-		DZA65_RS15750	0.87	-0.3
3,421,001	+				+1.2
3,421,001	+				-2.1
3,421,001	+				-1.5
3,421,001	+				+1.0
3,421,002	-				-1.3
3,421,002	-				-2.0
3,421,026	+				-0.8
3,421,026	+				-1.0
3,421,026	+				-2.0
3,421,027	-				-2.3
3,421,027	-				-0.1
3,421,027	-				+0.9
3,421,027	-				-1.3
3,421,027	-				+0.2
3,421,027	-				+0.2
3,421,027	-				-1.0
3,421,035	+				-1.8
3,421,036	-				+0.5
3,421,138	-				-2.0
3,421,139	+				-2.0
3,421,139	+				-1.3
3,421,139	+				+1.0
3,421,139	+				-2.3
3,421,140	-				-3.0
3,421,140	-				-2.0
3,421,140	-				-1.1
3,421,140	-				+0.6
3,421,146	+				+1.6
3,421,177	+				+0.5
3,421,180	+				+1.0
3,421,181	-				-1.5
3,421,241	-				-2.2
3,421,272	-				-0.5
3,421,272	-				-2.7
3,421,329	-				-0.8
3,421,338	-		DZA65_RS15755	0.13	+0.5
3,421,362	-		DZA65_RS15755	0.20	-0.2
3,421,388	-		DZA65_RS15755	0.29	-1.0
3,421,388	-		DZA65_RS15755	0.29	-1.5
3,421,471	+		DZA65_RS15755	0.55	-0.3
3,421,471	+		DZA65_RS15755	0.55	-1.3
3,421,471	+		DZA65_RS15755	0.55	-2.8
3,421,472	-		DZA65_RS15755	0.55	+0.0
3,421,472	-		DZA65_RS15755	0.55	-0.7
3,421,493	-		DZA65_RS15755	0.62	-1.8
3,421,493	-		DZA65_RS15755	0.62	+0.0
3,421,554	-		DZA65_RS15755	0.81	-1.3
3,421,554	-		DZA65_RS15755	0.81	-1.0
3,421,554	-		DZA65_RS15755	0.81	+1.0
3,421,592	-				-2.1
3,421,592	-				+0.3
3,421,592	-				-2.1
3,421,618	+				-1.1
3,421,618	+				-0.7
3,421,619	-				+0.4
3,421,619	-				-0.1
3,421,619	-				+1.2
3,421,619	-				+0.5
3,421,619	-				-2.0
3,421,619	-				-0.5
3,421,619	-				-1.5
3,421,619	-				-0.5
3,421,619	-				-2.5
3,421,619	-				+2.0
3,421,800	+				-0.5
3,421,801	-				-0.2
3,421,801	-				-1.0
3,421,807	-				+1.7
3,421,808	+				-2.1
3,421,847	+				-0.5
3,421,847	+				+0.8
3,421,863	+				-1.1
3,421,863	+				-2.0
3,421,863	+				+0.2
3,421,863	+				+0.6
3,421,864	-				-1.3
3,421,864	-				-0.4
3,421,864	-				-2.7
3,421,864	-				-0.5
3,421,992	+		DZA65_RS15760	0.13	-1.5
3,422,006	+		DZA65_RS15760	0.14	+0.0
3,422,006	+		DZA65_RS15760	0.14	-1.5
3,422,006	+		DZA65_RS15760	0.14	-1.0
3,422,006	+		DZA65_RS15760	0.14	-1.3
3,422,007	-		DZA65_RS15760	0.14	+0.3
3,422,007	-		DZA65_RS15760	0.14	-1.5
3,422,007	-		DZA65_RS15760	0.14	-0.5
3,422,061	-		DZA65_RS15760	0.16	-1.7
3,422,075	+		DZA65_RS15760	0.17	-1.0
3,422,075	+		DZA65_RS15760	0.17	-2.0
3,422,075	+		DZA65_RS15760	0.17	-2.1
3,422,075	+		DZA65_RS15760	0.17	+0.2
3,422,076	-		DZA65_RS15760	0.17	-1.3
3,422,076	-		DZA65_RS15760	0.17	-0.5
3,422,186	+		DZA65_RS15760	0.22	-0.5
3,422,186	+		DZA65_RS15760	0.22	-1.3
3,422,186	+		DZA65_RS15760	0.22	+1.0
3,422,186	+		DZA65_RS15760	0.22	-1.0
3,422,187	-		DZA65_RS15760	0.23	-0.5
3,422,267	+		DZA65_RS15760	0.26	-1.5
3,422,303	+		DZA65_RS15760	0.28	-0.3
3,422,303	+		DZA65_RS15760	0.28	-1.3
3,422,303	+		DZA65_RS15760	0.28	+1.4
3,422,303	+		DZA65_RS15760	0.28	-0.5
3,422,303	+		DZA65_RS15760	0.28	-2.1
3,422,303	+		DZA65_RS15760	0.28	+1.5
3,422,304	-		DZA65_RS15760	0.28	+0.0
3,422,304	-		DZA65_RS15760	0.28	+2.0
3,422,304	-		DZA65_RS15760	0.28	-1.3
3,422,304	-		DZA65_RS15760	0.28	-1.5
3,422,375	+		DZA65_RS15760	0.32	-0.5
3,422,375	+		DZA65_RS15760	0.32	-2.3
3,422,375	+		DZA65_RS15760	0.32	+0.7
3,422,375	+		DZA65_RS15760	0.32	-1.3
3,422,375	+		DZA65_RS15760	0.32	+1.7
3,422,375	+		DZA65_RS15760	0.32	-0.5
3,422,375	+		DZA65_RS15760	0.32	-0.1
3,422,375	+		DZA65_RS15760	0.32	+1.0
3,422,375	+		DZA65_RS15760	0.32	+0.0
3,422,375	+		DZA65_RS15760	0.32	+2.4
3,422,376	-		DZA65_RS15760	0.32	-0.8
3,422,376	-		DZA65_RS15760	0.32	+1.6
3,422,376	-		DZA65_RS15760	0.32	-1.8
3,422,376	-		DZA65_RS15760	0.32	-1.0
3,422,376	-		DZA65_RS15760	0.32	+0.0
3,422,376	-		DZA65_RS15760	0.32	-1.5
3,422,376	-		DZA65_RS15760	0.32	-2.9
3,422,392	+		DZA65_RS15760	0.33	-1.5
3,422,392	+		DZA65_RS15760	0.33	-3.1
3,422,392	+		DZA65_RS15760	0.33	+0.5
3,422,392	+		DZA65_RS15760	0.33	-1.8
3,422,578	+		DZA65_RS15760	0.42	-0.5
3,422,729	+		DZA65_RS15760	0.49	-0.8
3,422,729	+		DZA65_RS15760	0.49	-0.8
3,422,730	-		DZA65_RS15760	0.49	-0.8
3,422,730	-		DZA65_RS15760	0.49	+0.9
3,422,765	-		DZA65_RS15760	0.51	+2.0
3,422,778	+		DZA65_RS15760	0.51	-1.3
3,422,778	+		DZA65_RS15760	0.51	+0.7
3,422,779	-		DZA65_RS15760	0.51	-1.3
3,422,779	-		DZA65_RS15760	0.51	+0.0
3,422,779	-		DZA65_RS15760	0.51	+0.3
3,422,779	-		DZA65_RS15760	0.51	+1.0
3,422,901	+		DZA65_RS15760	0.57	+1.0
3,422,901	+		DZA65_RS15760	0.57	-1.3
3,422,902	-		DZA65_RS15760	0.57	-1.3
3,422,902	-		DZA65_RS15760	0.57	-2.0
3,422,903	+		DZA65_RS15760	0.57	-1.4
3,422,903	+		DZA65_RS15760	0.57	-2.1
3,422,903	+		DZA65_RS15760	0.57	-2.5
3,422,904	-		DZA65_RS15760	0.57	-1.5
3,422,904	-		DZA65_RS15760	0.57	+0.0
3,422,904	-		DZA65_RS15760	0.57	+2.0
3,422,904	-		DZA65_RS15760	0.57	-0.3
3,422,904	-		DZA65_RS15760	0.57	+1.0
3,422,904	-		DZA65_RS15760	0.57	-0.5
3,422,904	-		DZA65_RS15760	0.57	-2.5
3,422,904	-		DZA65_RS15760	0.57	-1.5
3,422,904	-		DZA65_RS15760	0.57	-0.4
3,422,904	-		DZA65_RS15760	0.57	-2.7
3,422,904	-		DZA65_RS15760	0.57	-0.5
3,422,904	-		DZA65_RS15760	0.57	+2.9
3,422,929	-		DZA65_RS15760	0.59	-0.5
3,422,948	+		DZA65_RS15760	0.60	+0.7
3,422,949	-		DZA65_RS15760	0.60	-1.8
3,422,964	+		DZA65_RS15760	0.60	+0.2
3,422,994	-		DZA65_RS15760	0.62	+0.0
3,422,994	-		DZA65_RS15760	0.62	-0.2
3,422,999	+		DZA65_RS15760	0.62	-1.1
3,423,000	-		DZA65_RS15760	0.62	+2.2
3,423,005	+		DZA65_RS15760	0.62	+0.6
3,423,005	+		DZA65_RS15760	0.62	-1.3
3,423,005	+		DZA65_RS15760	0.62	-2.1
3,423,005	+		DZA65_RS15760	0.62	+4.1
3,423,006	-		DZA65_RS15760	0.62	-0.5
3,423,011	+		DZA65_RS15760	0.63	-1.0
3,423,012	-		DZA65_RS15760	0.63	+1.0
3,423,012	-		DZA65_RS15760	0.63	-0.5
3,423,012	-		DZA65_RS15760	0.63	-1.3
3,423,012	-		DZA65_RS15760	0.63	+1.7
3,423,078	+		DZA65_RS15760	0.66	-0.2
3,423,079	-		DZA65_RS15760	0.66	-0.2
3,423,102	+		DZA65_RS15760	0.67	-0.1
3,423,103	-		DZA65_RS15760	0.67	-0.3
3,423,105	+		DZA65_RS15760	0.67	-0.5
3,423,106	-		DZA65_RS15760	0.67	-2.0
3,423,188	+		DZA65_RS15760	0.71	-2.1
3,423,188	+		DZA65_RS15760	0.71	-1.0
3,423,188	+		DZA65_RS15760	0.71	-0.1
3,423,188	+		DZA65_RS15760	0.71	+0.9
3,423,188	+		DZA65_RS15760	0.71	+1.9
3,423,188	+		DZA65_RS15760	0.71	+0.6
3,423,188	+		DZA65_RS15760	0.71	+0.3
3,423,188	+		DZA65_RS15760	0.71	+0.0
3,423,189	-		DZA65_RS15760	0.71	+0.7
3,423,189	-		DZA65_RS15760	0.71	-0.5
3,423,189	-		DZA65_RS15760	0.71	-0.5
3,423,189	-		DZA65_RS15760	0.71	+0.3
3,423,192	+		DZA65_RS15760	0.71	-0.1
3,423,192	+		DZA65_RS15760	0.71	-1.0
3,423,193	-		DZA65_RS15760	0.71	+0.3
3,423,193	-		DZA65_RS15760	0.71	-2.1
3,423,193	-		DZA65_RS15760	0.71	-1.0
3,423,193	-		DZA65_RS15760	0.71	-0.1
3,423,193	-		DZA65_RS15760	0.71	-0.0
3,423,225	+		DZA65_RS15760	0.73	+0.0
3,423,225	+		DZA65_RS15760	0.73	+1.9
3,423,225	+		DZA65_RS15760	0.73	-0.8
3,423,225	+		DZA65_RS15760	0.73	+0.4
3,423,226	-		DZA65_RS15760	0.73	-0.5
3,423,226	-		DZA65_RS15760	0.73	-1.3
3,423,226	-		DZA65_RS15760	0.73	-0.7
3,423,226	-		DZA65_RS15760	0.73	+0.7
3,423,256	+		DZA65_RS15760	0.74	-3.3
3,423,256	+		DZA65_RS15760	0.74	+2.0
3,423,257	-		DZA65_RS15760	0.75	-1.5
3,423,308	+		DZA65_RS15760	0.77	-2.3
3,423,308	+		DZA65_RS15760	0.77	-0.5
3,423,309	-		DZA65_RS15760	0.77	-0.5
3,423,309	-		DZA65_RS15760	0.77	+1.5
3,423,552	-		DZA65_RS15760	0.89	-1.8
3,423,553	+		DZA65_RS15760	0.89	+1.6
3,423,554	-		DZA65_RS15760	0.89	-0.3
3,423,554	-		DZA65_RS15760	0.89	+1.0
3,423,554	-				-2.1
3,423,558	+		DZA65_RS15760	0.89	-1.8
3,423,590	+				-1.5
3,423,591	-				+2.3
3,423,591	-				-0.3
3,423,591	-				-0.0
3,423,631	-				-1.8
3,423,631	-				-0.4
3,423,634	+				-2.8
3,423,634	+				+0.0
3,423,635	-				-2.3
3,423,648	+				-0.3
3,423,648	+				-0.1
3,423,648	+				+0.6
3,423,648	+				+1.0
3,423,648	+				+1.0
3,423,649	-				-0.1
3,423,649	-				-1.5
3,423,649	-				-1.5
3,423,649	-				-1.3
3,423,649	-				-1.0
3,423,649	-				+0.0
3,423,699	-				-2.4
3,423,722	+				+1.5
3,423,722	+				+0.9
3,423,722	+				-0.1
3,423,736	+				+1.3
3,423,736	+				-0.8
3,423,736	+				+0.0
3,423,736	+				+0.0
3,423,736	+				-1.6
3,423,736	+				+1.4
3,423,736	+				+1.3
3,423,736	+				+2.2
3,423,736	+				-0.4
3,423,736	+				+0.9
3,423,736	+				-3.2
3,423,737	-				+0.0
3,423,737	-				-0.1
3,423,737	-				-1.0
3,423,737	-				-1.4
3,423,737	-				-0.3
3,423,737	-				-2.0
3,423,737	-				-1.1
3,423,740	-				-1.0
3,423,802	-				+2.0
3,423,802	-				-3.0
3,423,814	+				-2.2
3,423,814	+				-0.5
3,423,814	+				-1.0
3,423,814	+				-0.3
3,423,815	-				-0.3
3,423,815	-				+1.0
3,423,815	-				-2.0
3,423,815	-				-0.7
3,423,815	-				-0.4
3,423,815	-				-0.5
3,423,815	-				-1.8
3,423,815	-				-2.1
3,423,815	-				+0.4
3,423,816	+				-1.1
3,423,816	+				-0.3
3,423,816	+				-1.4
3,423,816	+				-1.0
3,423,816	+				-0.5
3,423,817	-				+3.3
3,423,817	-				-1.5
3,423,817	-				+0.6
3,423,817	-				+2.0
3,423,817	-				-1.3
3,423,817	-				-0.5
3,423,823	+				-1.3
3,423,823	+				+0.0
3,423,823	+				-2.0
3,423,823	+				-2.3
3,423,824	-				+0.7
3,423,824	-				+1.0
3,423,855	+				-1.8
3,423,868	+				-0.5
3,423,868	+				-3.4
3,423,869	-				+1.0
3,423,903	+				-1.3
3,423,903	+				-0.5
3,423,904	-				-0.5
3,423,904	-				-0.3
3,423,916	+				-2.1
3,423,917	-				-1.8
3,423,917	-				+1.2
3,423,921	-				-1.9
3,423,959	+				-2.0
3,423,959	+				-1.0
3,423,959	+				-2.8
3,423,959	+				+0.4
3,423,959	+				+0.0
3,423,959	+				-0.8
3,423,960	-				-2.0
3,423,960	-				-3.0
3,423,960	-				-2.0
3,423,964	-				-0.5
3,424,012	+				+0.3
3,424,012	+				-0.5
3,424,012	+				-1.5
3,424,041	-		DZA65_RS15765	0.10	-1.2
3,424,041	-		DZA65_RS15765	0.10	-0.4
3,424,075	+		DZA65_RS15765	0.13	-2.1
3,424,076	-		DZA65_RS15765	0.13	+1.7
3,424,076	-		DZA65_RS15765	0.13	+3.4
3,424,076	-		DZA65_RS15765	0.13	-1.0
3,424,114	-		DZA65_RS15765	0.17	+1.0
3,424,155	+		DZA65_RS15765	0.20	-2.5
3,424,155	+		DZA65_RS15765	0.20	-1.3
3,424,155	+		DZA65_RS15765	0.20	-2.1
3,424,156	-		DZA65_RS15765	0.20	+0.5
3,424,156	-		DZA65_RS15765	0.20	-1.0
3,424,156	-		DZA65_RS15765	0.20	+1.0
3,424,156	-		DZA65_RS15765	0.20	+0.9
3,424,232	+		DZA65_RS15765	0.26	-0.3
3,424,232	+		DZA65_RS15765	0.26	-2.5
3,424,232	+		DZA65_RS15765	0.26	-1.0
3,424,232	+		DZA65_RS15765	0.26	+2.9
3,424,232	+		DZA65_RS15765	0.26	-0.5
3,424,232	+		DZA65_RS15765	0.26	-0.5
3,424,233	-		DZA65_RS15765	0.27	-1.3
3,424,233	-		DZA65_RS15765	0.27	-1.3
3,424,233	-		DZA65_RS15765	0.27	-1.3
3,424,234	+		DZA65_RS15765	0.27	+1.0
3,424,234	+		DZA65_RS15765	0.27	-2.0
3,424,235	-		DZA65_RS15765	0.27	-1.0
3,424,235	-		DZA65_RS15765	0.27	-1.3
3,424,241	-		DZA65_RS15765	0.27	-1.3
3,424,241	-		DZA65_RS15765	0.27	+0.7
3,424,274	-		DZA65_RS15765	0.30	-1.3
3,424,274	-		DZA65_RS15765	0.30	+1.0
3,424,330	+		DZA65_RS15765	0.35	+0.5
3,424,331	-		DZA65_RS15765	0.35	-0.8
3,424,331	-		DZA65_RS15765	0.35	+1.4
3,424,336	+		DZA65_RS15765	0.35	+1.0
3,424,336	+		DZA65_RS15765	0.35	-1.0
3,424,336	+		DZA65_RS15765	0.35	-3.0
3,424,336	+		DZA65_RS15765	0.35	-0.5
3,424,336	+		DZA65_RS15765	0.35	-1.3
3,424,336	+		DZA65_RS15765	0.35	+0.3
3,424,336	+		DZA65_RS15765	0.35	-1.4
3,424,336	+		DZA65_RS15765	0.35	+0.0
3,424,336	+		DZA65_RS15765	0.35	+0.8
3,424,337	-		DZA65_RS15765	0.35	-1.8
3,424,337	-		DZA65_RS15765	0.35	-0.3
3,424,337	-		DZA65_RS15765	0.35	+1.7
3,424,337	-		DZA65_RS15765	0.35	-2.0
3,424,337	-		DZA65_RS15765	0.35	-2.0
3,424,337	-		DZA65_RS15765	0.35	+1.2
3,424,337	-		DZA65_RS15765	0.35	-2.5
3,424,337	-		DZA65_RS15765	0.35	+1.3
3,424,337	-		DZA65_RS15765	0.35	+0.5
3,424,337	-		DZA65_RS15765	0.35	-0.1
3,424,337	-		DZA65_RS15765	0.35	+2.0
3,424,337	-		DZA65_RS15765	0.35	-1.5
3,424,337	-		DZA65_RS15765	0.35	+2.9
3,424,337	-		DZA65_RS15765	0.35	+2.2
3,424,337	-		DZA65_RS15765	0.35	+0.5
3,424,598	+		DZA65_RS15765	0.57	-0.5
3,424,648	+		DZA65_RS15765	0.61	-0.6
3,424,648	+		DZA65_RS15765	0.61	-0.1
3,424,648	+		DZA65_RS15765	0.61	+0.5
3,424,648	+		DZA65_RS15765	0.61	-0.4
3,424,648	+		DZA65_RS15765	0.61	-2.0
3,424,648	+		DZA65_RS15765	0.61	-1.0
3,424,648	+		DZA65_RS15765	0.61	-2.8
3,424,648	+		DZA65_RS15765	0.61	-0.2
3,424,648	+		DZA65_RS15765	0.61	-1.3
3,424,648	+		DZA65_RS15765	0.61	+0.4
3,424,648	+		DZA65_RS15765	0.61	+0.2
3,424,648	+		DZA65_RS15765	0.61	-1.9
3,424,648	+		DZA65_RS15765	0.61	-1.7
3,424,649	-		DZA65_RS15765	0.61	+0.4
3,424,649	-		DZA65_RS15765	0.61	-1.5
3,424,649	-		DZA65_RS15765	0.61	+1.6
3,424,649	-		DZA65_RS15765	0.61	-0.5
3,424,649	-		DZA65_RS15765	0.61	-1.2
3,424,649	-		DZA65_RS15765	0.61	+2.2
3,424,649	-		DZA65_RS15765	0.61	-1.0
3,424,649	-		DZA65_RS15765	0.61	-1.0
3,424,649	-		DZA65_RS15765	0.61	-2.9
3,424,649	-		DZA65_RS15765	0.61	+1.0
3,424,649	-		DZA65_RS15765	0.61	-1.5
3,424,649	-		DZA65_RS15765	0.61	-1.3
3,424,649	-		DZA65_RS15765	0.61	-0.1
3,424,652	+		DZA65_RS15765	0.61	+0.2
3,424,652	+		DZA65_RS15765	0.61	-1.6
3,424,652	+		DZA65_RS15765	0.61	-1.8
3,424,652	+		DZA65_RS15765	0.61	-1.2
3,424,652	+		DZA65_RS15765	0.61	-1.5
3,424,652	+		DZA65_RS15765	0.61	-1.5
3,424,652	+		DZA65_RS15765	0.61	-1.0
3,424,653	-		DZA65_RS15765	0.61	-0.4
3,424,653	-		DZA65_RS15765	0.61	+0.0
3,424,653	-		DZA65_RS15765	0.61	-0.4
3,424,653	-		DZA65_RS15765	0.61	+1.2
3,424,653	-		DZA65_RS15765	0.61	-1.5
3,424,653	-		DZA65_RS15765	0.61	-1.5
3,424,653	-		DZA65_RS15765	0.61	-0.8
3,424,653	-		DZA65_RS15765	0.61	+0.0
3,424,653	-		DZA65_RS15765	0.61	-0.5
3,424,653	-		DZA65_RS15765	0.61	-1.3
3,424,653	-		DZA65_RS15765	0.61	-1.3
3,424,653	-		DZA65_RS15765	0.61	+0.0
3,424,678	+		DZA65_RS15765	0.64	+1.6
3,424,678	+		DZA65_RS15765	0.64	-0.3
3,424,679	-		DZA65_RS15765	0.64	+2.3
3,424,742	-		DZA65_RS15765	0.69	+2.2