Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13965

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
2,996,387	+				-1.1
2,996,421	+				+0.4
2,996,422	-				+0.4
2,996,425	+				-1.6
2,996,426	-				-2.4
2,996,428	+				-1.6
2,996,455	+				-3.4
2,996,461	+				-1.6
2,996,461	+				-1.6
2,996,462	-				-1.6
2,996,472	+				+1.4
2,996,472	+				-1.4
2,996,472	+				-2.6
2,996,472	+				-1.6
2,996,473	-				-1.9
2,996,473	-				-1.1
2,996,473	-				-1.2
2,996,473	-				-0.6
2,996,473	-				+0.9
2,996,473	-				-3.2
2,996,473	-				-3.1
2,996,505	+				-0.1
2,996,505	+				-2.9
2,996,505	+				+2.5
2,996,505	+				-2.2
2,996,505	+				-2.2
2,996,505	+				+0.9
2,996,506	-				-0.1
2,996,506	-				-1.6
2,996,506	-				-2.4
2,996,506	-				-1.6
2,996,527	+		DZA65_RS13960	0.12	-0.9
2,996,527	+		DZA65_RS13960	0.12	-2.8
2,996,581	+		DZA65_RS13960	0.17	-0.6
2,996,582	-		DZA65_RS13960	0.17	+2.5
2,996,651	-		DZA65_RS13960	0.25	-1.6
2,996,651	-		DZA65_RS13960	0.25	-1.1
2,996,684	-		DZA65_RS13960	0.28	+0.9
2,996,711	-		DZA65_RS13960	0.31	-0.6
2,996,711	-		DZA65_RS13960	0.31	+0.3
2,996,804	-		DZA65_RS13960	0.41	+0.6
2,996,804	-		DZA65_RS13960	0.41	-1.6
2,996,807	+		DZA65_RS13960	0.42	+0.1
2,996,807	+		DZA65_RS13960	0.42	-1.6
2,996,808	-		DZA65_RS13960	0.42	-1.3
2,996,808	-		DZA65_RS13960	0.42	-1.9
2,996,808	-		DZA65_RS13960	0.42	-2.9
2,996,886	+		DZA65_RS13960	0.50	-2.1
2,996,886	+		DZA65_RS13960	0.50	-4.6
2,996,886	+		DZA65_RS13960	0.50	-0.6
2,996,886	+		DZA65_RS13960	0.50	-1.1
2,996,886	+		DZA65_RS13960	0.50	-1.9
2,996,886	+		DZA65_RS13960	0.50	-0.6
2,996,886	+		DZA65_RS13960	0.50	-2.1
2,996,886	+		DZA65_RS13960	0.50	-2.4
2,996,887	-		DZA65_RS13960	0.50	-2.3
2,996,887	-		DZA65_RS13960	0.50	-1.1
2,996,887	-		DZA65_RS13960	0.50	-3.8
2,996,887	-		DZA65_RS13960	0.50	-0.9
2,996,887	-		DZA65_RS13960	0.50	-0.9
2,996,887	-		DZA65_RS13960	0.50	-1.6
2,996,887	-		DZA65_RS13960	0.50	-1.9
2,996,887	-		DZA65_RS13960	0.50	-3.8
2,996,887	-		DZA65_RS13960	0.50	-3.1
2,996,887	-				-2.9
2,996,887	-		DZA65_RS13960	0.50	-0.3
2,996,891	+		DZA65_RS13960	0.51	-1.4
2,996,891	+		DZA65_RS13960	0.51	-0.1
2,996,892	-		DZA65_RS13960	0.51	-0.1
2,996,911	+		DZA65_RS13960	0.53	-3.4
2,996,912	-		DZA65_RS13960	0.53	-0.1
2,996,912	-		DZA65_RS13960	0.53	-1.4
2,996,912	-		DZA65_RS13960	0.53	-1.1
2,996,915	-		DZA65_RS13960	0.53	-1.3
2,996,915	-		DZA65_RS13960	0.53	-2.6
2,996,915	-		DZA65_RS13960	0.53	-3.0
2,997,025	+				-2.4
2,997,026	-		DZA65_RS13960	0.65	-0.6
2,997,041	-		DZA65_RS13960	0.67	+0.1
2,997,053	-		DZA65_RS13960	0.68	-3.4
2,997,065	+		DZA65_RS13960	0.69	-2.1
2,997,065	+		DZA65_RS13960	0.69	+0.9
2,997,066	-		DZA65_RS13960	0.69	-0.1
2,997,066	-		DZA65_RS13960	0.69	-1.9
2,997,066	-		DZA65_RS13960	0.69	-0.6
2,997,066	-		DZA65_RS13960	0.69	-1.6
2,997,076	+		DZA65_RS13960	0.71	-1.1
2,997,077	-		DZA65_RS13960	0.71	-1.1
2,997,102	-		DZA65_RS13960	0.73	-1.1
2,997,127	+		DZA65_RS13960	0.76	-0.3
2,997,128	-		DZA65_RS13960	0.76	-1.6
2,997,128	-		DZA65_RS13960	0.76	-1.4
2,997,128	-		DZA65_RS13960	0.76	-1.4
2,997,134	-		DZA65_RS13960	0.77	-3.8
2,997,152	-		DZA65_RS13960	0.79	-2.2
2,997,163	+		DZA65_RS13960	0.80	+0.8
2,997,163	+		DZA65_RS13960	0.80	-2.5
2,997,164	-		DZA65_RS13960	0.80	-1.1
2,997,164	-		DZA65_RS13960	0.80	-3.1
2,997,164	-		DZA65_RS13960	0.80	-1.9
2,997,164	-		DZA65_RS13960	0.80	-1.9
2,997,164	-		DZA65_RS13960	0.80	+1.5
2,997,164	-		DZA65_RS13960	0.80	-1.6
2,997,164	-		DZA65_RS13960	0.80	-1.4
2,997,164	-		DZA65_RS13960	0.80	-0.6
2,997,164	-		DZA65_RS13960	0.80	-2.8
2,997,164	-		DZA65_RS13960	0.80	-0.1
2,997,164	-		DZA65_RS13960	0.80	-1.1
2,997,165	+		DZA65_RS13960	0.80	-0.4
2,997,165	+		DZA65_RS13960	0.80	-1.1
2,997,165	+		DZA65_RS13960	0.80	-2.2
2,997,166	-		DZA65_RS13960	0.80	-0.9
2,997,166	-		DZA65_RS13960	0.80	-1.9
2,997,166	-		DZA65_RS13960	0.80	-1.4
2,997,250	+		DZA65_RS13960	0.89	+0.9
2,997,250	+		DZA65_RS13960	0.89	-2.4
2,997,250	+		DZA65_RS13960	0.89	+0.0
2,997,251	-		DZA65_RS13960	0.89	-2.1
2,997,254	-		DZA65_RS13960	0.90	-0.1
2,997,254	-		DZA65_RS13960	0.90	-0.1
2,997,291	-				-2.0
2,997,313	+				-1.6
2,997,313	+				-1.9
2,997,313	+				-1.6
2,997,314	-				-1.6
2,997,314	-				-3.9
2,997,314	-				-2.0
2,997,331	+				+1.5
2,997,332	-				-1.4
2,997,332	-				-2.2
2,997,337	+				-0.8
2,997,349	+				-2.4
2,997,354	+				+0.8
2,997,362	-				-1.4
2,997,370	-				-1.6
2,997,383	+				-2.8
2,997,383	+				-2.4
2,997,433	+				-3.0
2,997,434	-				-2.5
2,997,452	+				-2.2
2,997,452	+				-0.6
2,997,452	+				-1.6
2,997,452	+				-1.1
2,997,452	+				-1.6
2,997,452	+				-1.4
2,997,452	+				-2.5
2,997,452	+				-0.6
2,997,452	+				-1.4
2,997,452	+				+0.7
2,997,453	-				-0.6
2,997,453	-				-2.9
2,997,453	-				-2.4
2,997,453	-				-2.1
2,997,453	-				-2.2
2,997,453	-				-0.6
2,997,453	-				-1.4
2,997,453	-				-1.1
2,997,453	-				-2.1
2,997,453	-				-2.4
2,997,453	-				-2.9
2,997,453	-				-0.1
2,997,453	-				-0.4
2,997,453	-				-3.1
2,997,455	+				-0.4
2,997,456	-				-0.9
2,997,456	-				-1.4
2,997,456	-				-4.2
2,997,482	+				-2.6
2,997,482	+				-1.9
2,997,482	+				-1.1
2,997,483	-				-1.9
2,997,483	-				-1.4
2,997,483	-				-0.6
2,997,525	+				-2.1
2,997,558	+				-1.9
2,997,558	+				-2.2
2,997,559	-				+2.9
2,997,559	-				-0.9
2,997,559	-				-0.6
2,997,614	+		DZA65_RS13965	0.12	-5.0
2,997,895	-		DZA65_RS13965	0.27	+0.9
2,997,895	-		DZA65_RS13965	0.27	-1.4
2,997,895	-		DZA65_RS13965	0.27	-1.4
2,997,896	+		DZA65_RS13965	0.27	-3.4
2,997,896	+		DZA65_RS13965	0.27	-3.7
2,997,896	+		DZA65_RS13965	0.27	+1.9
2,997,896	+		DZA65_RS13965	0.27	+1.9
2,997,896	+		DZA65_RS13965	0.27	-2.9
2,997,896	+		DZA65_RS13965	0.27	-1.4
2,997,897	-		DZA65_RS13965	0.27	+0.9
2,997,897	-		DZA65_RS13965	0.27	-1.4
2,997,897	-		DZA65_RS13965	0.27	+0.9
2,997,897	-		DZA65_RS13965	0.27	-0.1
2,997,897	-		DZA65_RS13965	0.27	-0.8
2,997,897	-		DZA65_RS13965	0.27	-2.4
2,997,981	+		DZA65_RS13965	0.31	-2.1
2,997,982	-		DZA65_RS13965	0.31	-1.6
2,997,982	-		DZA65_RS13965	0.31	-2.4
2,997,982	-		DZA65_RS13965	0.31	-3.2
2,997,982	-		DZA65_RS13965	0.31	-2.2
2,997,983	+		DZA65_RS13965	0.31	-2.1
2,997,983	+		DZA65_RS13965	0.31	-1.6
2,997,984	-		DZA65_RS13965	0.31	-1.9
2,997,996	+		DZA65_RS13965	0.32	-2.5
2,997,996	+		DZA65_RS13965	0.32	-1.9
2,998,001	+		DZA65_RS13965	0.32	-2.2
2,998,001	+		DZA65_RS13965	0.32	-1.4
2,998,001	+		DZA65_RS13965	0.32	-1.1
2,998,001	+				+1.5
2,998,001	+		DZA65_RS13965	0.32	-1.1
2,998,001	+		DZA65_RS13965	0.32	-1.1
2,998,002	-		DZA65_RS13965	0.32	-0.6
2,998,002	-		DZA65_RS13965	0.32	-1.4
2,998,002	-		DZA65_RS13965	0.32	-0.6
2,998,002	-		DZA65_RS13965	0.32	+0.9
2,998,002	-		DZA65_RS13965	0.32	-0.1
2,998,002	-		DZA65_RS13965	0.32	-2.5
2,998,002	-		DZA65_RS13965	0.32	+4.9
2,998,002	-		DZA65_RS13965	0.32	-1.6
2,998,002	-		DZA65_RS13965	0.32	-2.2
2,998,002	-		DZA65_RS13965	0.32	-4.1
2,998,002	-		DZA65_RS13965	0.32	+3.8
2,998,009	-		DZA65_RS13965	0.33	-3.7
2,998,009	-		DZA65_RS13965	0.33	+5.3
2,998,128	+		DZA65_RS13965	0.39	-1.6
2,998,129	-		DZA65_RS13965	0.39	-2.6
2,998,129	-		DZA65_RS13965	0.39	-4.5
2,998,226	+		DZA65_RS13965	0.44	-1.1
2,998,238	+		DZA65_RS13965	0.45	+1.9
2,998,238	+		DZA65_RS13965	0.45	-1.1
2,998,239	-		DZA65_RS13965	0.45	-2.1
2,998,239	-		DZA65_RS13965	0.45	-0.6
2,998,239	-		DZA65_RS13965	0.45	-1.1
2,998,239	-		DZA65_RS13965	0.45	+2.8
2,998,242	+		DZA65_RS13965	0.45	-1.8
2,998,242	+		DZA65_RS13965	0.45	+1.6
2,998,243	-		DZA65_RS13965	0.45	-1.6
2,998,243	-		DZA65_RS13965	0.45	-2.1
2,998,253	+		DZA65_RS13965	0.45	-1.1
2,998,253	+		DZA65_RS13965	0.45	+0.9
2,998,253	+		DZA65_RS13965	0.45	-2.4
2,998,254	-		DZA65_RS13965	0.45	-1.6
2,998,254	-		DZA65_RS13965	0.45	-2.1
2,998,282	-		DZA65_RS13965	0.47	-1.1
2,998,282	-		DZA65_RS13965	0.47	-1.9
2,998,282	-		DZA65_RS13965	0.47	-1.4
2,998,389	+		DZA65_RS13965	0.52	-1.1
2,998,389	+		DZA65_RS13965	0.52	-0.2
2,998,390	-		DZA65_RS13965	0.52	-0.6
2,998,390	-		DZA65_RS13965	0.52	-2.9
2,998,437	+		DZA65_RS13965	0.55	-0.4
2,998,437	+		DZA65_RS13965	0.55	-0.6
2,998,482	+		DZA65_RS13965	0.57	-0.5
2,998,483	-		DZA65_RS13965	0.57	-0.6
2,998,483	-		DZA65_RS13965	0.57	-1.1
2,998,483	-		DZA65_RS13965	0.57	-2.2
2,998,483	-		DZA65_RS13965	0.57	-1.9
2,998,483	-		DZA65_RS13965	0.57	-2.4
2,998,483	-		DZA65_RS13965	0.57	-2.9
2,998,485	+		DZA65_RS13965	0.57	-3.3
2,998,485	+		DZA65_RS13965	0.57	-3.4
2,998,485	+		DZA65_RS13965	0.57	-1.4
2,998,485	+		DZA65_RS13965	0.57	-1.9
2,998,526	+		DZA65_RS13965	0.59	-1.1
2,998,526	+		DZA65_RS13965	0.59	+0.9
2,998,527	-		DZA65_RS13965	0.60	-1.9
2,998,527	-		DZA65_RS13965	0.60	-3.6
2,998,539	+		DZA65_RS13965	0.60	+0.4
2,998,540	-		DZA65_RS13965	0.60	-0.6
2,998,567	-		DZA65_RS13965	0.62	-2.7
2,998,578	+		DZA65_RS13965	0.62	-2.2
2,998,578	+				-0.6
2,998,579	-		DZA65_RS13965	0.62	+3.3
2,998,579	-		DZA65_RS13965	0.62	-0.3
2,998,583	+		DZA65_RS13965	0.62	+4.3
2,998,584	-		DZA65_RS13965	0.63	-3.1
2,998,631	+		DZA65_RS13965	0.65	-1.1
2,998,631	+		DZA65_RS13965	0.65	-0.6
2,998,631	+		DZA65_RS13965	0.65	-2.1
2,998,631	+		DZA65_RS13965	0.65	+0.0
2,998,734	+		DZA65_RS13965	0.70	-0.6
2,998,770	+		DZA65_RS13965	0.72	-2.6
2,998,790	+		DZA65_RS13965	0.73	-1.1
2,998,794	+		DZA65_RS13965	0.73	-1.6
2,998,794	+		DZA65_RS13965	0.73	-1.6
2,998,795	-		DZA65_RS13965	0.73	-1.1
2,998,797	+		DZA65_RS13965	0.74	-2.4
2,998,813	-		DZA65_RS13965	0.74	-3.1
2,998,815	+		DZA65_RS13965	0.75	-1.1
2,998,815	+		DZA65_RS13965	0.75	+2.4
2,998,816	-		DZA65_RS13965	0.75	-2.4
2,998,834	-		DZA65_RS13965	0.76	-2.6
2,998,845	+		DZA65_RS13965	0.76	-1.1
2,998,857	-		DZA65_RS13965	0.77	-0.1
2,998,857	-		DZA65_RS13965	0.77	-1.1
2,998,857	-		DZA65_RS13965	0.77	+1.8
2,998,867	-		DZA65_RS13965	0.77	-1.4
2,998,918	+		DZA65_RS13965	0.80	-1.8
2,999,039	+		DZA65_RS13965	0.86	-2.9
2,999,039	+		DZA65_RS13965	0.86	+0.9
2,999,039	+		DZA65_RS13965	0.86	-0.2
2,999,040	-		DZA65_RS13965	0.86	-2.2
2,999,043	-		DZA65_RS13965	0.86	-0.1
2,999,080	+		DZA65_RS13965	0.88	-0.1
2,999,080	+		DZA65_RS13965	0.88	-1.6
2,999,080	+		DZA65_RS13965	0.88	+1.5
2,999,081	-		DZA65_RS13965	0.88	+0.0
2,999,081	-		DZA65_RS13965	0.88	-2.1
2,999,105	+		DZA65_RS13965	0.90	-1.6
2,999,105	+		DZA65_RS13965	0.90	-1.6
2,999,105	+		DZA65_RS13965	0.90	-1.4
2,999,105	+		DZA65_RS13965	0.90	-1.6
2,999,106	-		DZA65_RS13965	0.90	-2.1
2,999,161	-				-3.3
2,999,202	+				+5.1
2,999,202	+				-2.2
2,999,204	+				+0.9
2,999,289	+				-0.6
2,999,290	-				-1.1
2,999,318	+				-3.4
2,999,318	+				-1.6
2,999,318	+				-1.4
2,999,319	-				-0.1
2,999,319	-				-3.0
2,999,324	+				-2.1
2,999,346	+				-1.8
2,999,346	+				-1.1
2,999,346	+				+1.5
2,999,347	-				-2.6
2,999,347	-				-0.6
2,999,347	-				-1.4
2,999,347	-				+0.7
2,999,347	-				-1.1
2,999,347	-				+0.1
2,999,350	+				+2.1
2,999,350	+				-0.6
2,999,350	+				-3.1
2,999,350	+				-2.4
2,999,350	+				-0.4
2,999,350	+				-2.1
2,999,351	-				+1.7
2,999,351	-				-1.1
2,999,351	-				+0.3
2,999,351	-				+1.5
2,999,382	-				-0.1
2,999,393	+				-2.2
2,999,393	+				-1.4
2,999,393	+				-1.1
2,999,393	+				-2.1
2,999,393	+				-1.9
2,999,393	+				-1.1
2,999,393	+				-1.4
2,999,393	+				-0.1
2,999,393	+				-2.5
2,999,393	+				-2.1
2,999,393	+				-1.4
2,999,393	+				-1.6
2,999,393	+				-1.4
2,999,393	+				-1.1
2,999,394	-				-0.1
2,999,394	-				-1.4
2,999,394	-				-1.2
2,999,394	-				-0.8
2,999,394	-				-1.4
2,999,394	-				-1.9
2,999,394	-				-1.9
2,999,394	-				+1.8
2,999,394	-				-1.4
2,999,394	-				+0.9
2,999,395	+				-2.5
2,999,395	+				-1.5
2,999,395	+				+0.9
2,999,395	+				+0.8
2,999,395	+				+1.1
2,999,395	+				+2.0
2,999,395	+				-2.5
2,999,396	-				-0.6
2,999,396	-				+0.6
2,999,396	-				-3.3
2,999,396	-				+0.9
2,999,396	-				-1.9
2,999,396	-				-0.1
2,999,396	-				-1.6
2,999,396	-				+1.2
2,999,429	+				+1.3
2,999,430	-				-2.4
2,999,430	-				-0.5
2,999,432	+				+1.0
2,999,433	-				+0.7
2,999,433	-				-2.0
2,999,433	-				+0.8
2,999,457	+				-1.4
2,999,457	+				-0.9
2,999,457	+				-2.1
2,999,457	+				-1.8
2,999,458	-				-1.1
2,999,458	-				-1.1
2,999,458	-				-1.9
2,999,458	-				-0.6
2,999,458	-				-1.4
2,999,459	+				-1.6
2,999,460	-				-1.4
2,999,510	-				-3.9
2,999,543	+		DZA65_RS13970	0.12	+1.9
2,999,544	-		DZA65_RS13970	0.12	-2.5
2,999,657	+		DZA65_RS13970	0.24	+2.4
2,999,666	+		DZA65_RS13970	0.25	-0.1
2,999,667	-		DZA65_RS13970	0.25	-1.5
2,999,711	+		DZA65_RS13970	0.29	-1.1
2,999,711	+		DZA65_RS13970	0.29	-1.4
2,999,712	-		DZA65_RS13970	0.30	-3.2
2,999,712	-		DZA65_RS13970	0.30	-1.4
2,999,712	-		DZA65_RS13970	0.30	+0.2
2,999,722	-		DZA65_RS13970	0.31	-1.4
2,999,751	+		DZA65_RS13970	0.34	-2.2
2,999,751	+		DZA65_RS13970	0.34	-1.9
2,999,752	-		DZA65_RS13970	0.34	+0.7
2,999,764	-		DZA65_RS13970	0.35	-2.1
2,999,766	+		DZA65_RS13970	0.35	-2.4
2,999,766	+		DZA65_RS13970	0.35	+2.3
2,999,766	+		DZA65_RS13970	0.35	-3.1
2,999,767	-		DZA65_RS13970	0.35	-3.3
2,999,767	-		DZA65_RS13970	0.35	-2.4
2,999,767	-		DZA65_RS13970	0.35	-3.8
2,999,767	-		DZA65_RS13970	0.35	-2.1
2,999,767	-		DZA65_RS13970	0.35	-2.6
2,999,775	+		DZA65_RS13970	0.36	-2.4
2,999,775	+		DZA65_RS13970	0.36	-1.6
2,999,775	+		DZA65_RS13970	0.36	-0.6
2,999,775	+		DZA65_RS13970	0.36	-1.4
2,999,775	+		DZA65_RS13970	0.36	+2.5
2,999,776	-		DZA65_RS13970	0.36	-1.4
2,999,776	-		DZA65_RS13970	0.36	-2.5
2,999,776	-		DZA65_RS13970	0.36	-1.4
2,999,869	-		DZA65_RS13970	0.46	-1.8
2,999,869	-		DZA65_RS13970	0.46	-3.1
2,999,883	+		DZA65_RS13970	0.48	-1.9
2,999,916	+		DZA65_RS13970	0.51	-1.6
3,000,020	-		DZA65_RS13970	0.62	-3.0
3,000,158	+		DZA65_RS13970	0.76	-2.5
3,000,158	+		DZA65_RS13970	0.76	-0.6
3,000,158	+		DZA65_RS13970	0.76	+0.8
3,000,158	+		DZA65_RS13970	0.76	+0.1
3,000,158	+		DZA65_RS13970	0.76	-3.4
3,000,158	+		DZA65_RS13970	0.76	-0.1
3,000,158	+		DZA65_RS13970	0.76	-0.6
3,000,158	+		DZA65_RS13970	0.76	-1.4
3,000,158	+		DZA65_RS13970	0.76	-1.4
3,000,158	+		DZA65_RS13970	0.76	-2.7
3,000,158	+		DZA65_RS13970	0.76	-1.9
3,000,159	-		DZA65_RS13970	0.77	-2.4
3,000,159	-		DZA65_RS13970	0.77	-1.4
3,000,159	-		DZA65_RS13970	0.77	-2.8
3,000,159	-		DZA65_RS13970	0.77	-1.6
3,000,198	+		DZA65_RS13970	0.81	-2.2
3,000,225	+		DZA65_RS13970	0.83	-1.1
3,000,225	+		DZA65_RS13970	0.83	-0.2
3,000,226	-		DZA65_RS13970	0.84	-1.1
3,000,226	-		DZA65_RS13970	0.84	-3.6
3,000,226	-		DZA65_RS13970	0.84	-1.3
3,000,226	-		DZA65_RS13970	0.84	-2.2
3,000,226	-		DZA65_RS13970	0.84	-1.9
3,000,268	-		DZA65_RS13970	0.88	-1.6