Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12370

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
2,641,828	+		DZA65_RS12365	0.65	+0.5
2,641,828	+		DZA65_RS12365	0.65	-1.2
2,641,829	-		DZA65_RS12365	0.66	-2.2
2,641,858	+		DZA65_RS12365	0.67	+0.4
2,641,858	+		DZA65_RS12365	0.67	+0.3
2,641,858	+		DZA65_RS12365	0.67	-0.3
2,641,859	-		DZA65_RS12365	0.67	-2.0
2,641,859	-		DZA65_RS12365	0.67	+2.6
2,641,913	-		DZA65_RS12365	0.71	+0.4
2,641,913	-		DZA65_RS12365	0.71	-1.0
2,641,913	-		DZA65_RS12365	0.71	+1.0
2,641,946	+		DZA65_RS12365	0.73	-0.2
2,641,947	-		DZA65_RS12365	0.73	+1.3
2,641,948	+		DZA65_RS12365	0.73	-0.7
2,641,948	+		DZA65_RS12365	0.73	-1.6
2,641,948	+				-1.7
2,641,949	-		DZA65_RS12365	0.73	+0.5
2,642,009	-		DZA65_RS12365	0.77	+1.2
2,642,009	-		DZA65_RS12365	0.77	+0.5
2,642,009	-		DZA65_RS12365	0.77	+2.0
2,642,101	+		DZA65_RS12365	0.83	+0.8
2,642,101	+		DZA65_RS12365	0.83	+1.8
2,642,102	-		DZA65_RS12365	0.83	-0.7
2,642,170	+				-1.5
2,642,170	+		DZA65_RS12365	0.87	-0.0
2,642,210	+		DZA65_RS12365	0.90	+1.1
2,642,210	+		DZA65_RS12365	0.90	-0.2
2,642,210	+		DZA65_RS12365	0.90	-1.6
2,642,211	-		DZA65_RS12365	0.90	+1.1
2,642,529	+				-1.2
2,642,529	+				-1.2
2,642,529	+				-1.7
2,642,529	+				-1.2
2,642,529	+				+1.8
2,642,529	+				-0.7
2,642,530	-				-1.2
2,642,530	-				-1.7
2,642,530	-				+0.8
2,642,530	-				-1.2
2,642,530	-				-0.5
2,642,530	-				+1.8
2,642,530	-				-0.9
2,642,530	-				-1.5
2,642,593	-				-1.7
2,642,593	-				+0.0
2,642,593	-				+1.8
2,642,618	+				+0.5
2,642,671	-				-1.7
2,642,671	-				+0.7
2,642,672	+				+0.8
2,642,672	+				-1.2
2,642,672	+				-0.5
2,642,672	+				-1.5
2,642,672	+				-1.7
2,642,672	+				-3.6
2,642,672	+				-2.6
2,642,672	+				-1.2
2,642,672	+				-0.2
2,642,672	+				+1.3
2,642,673	-				-0.5
2,642,673	-				-0.7
2,642,673	-				+0.8
2,642,673	-				-0.2
2,642,673	-				-3.3
2,642,673	-				+0.1
2,642,673	-				-0.2
2,642,673	-				-0.5
2,642,714	+				-1.5
2,642,714	+				-0.7
2,642,715	-				+1.8
2,642,715	-				+0.1
2,642,715	-				+0.1
2,642,746	+				-1.0
2,642,746	+				-0.7
2,642,777	+				+0.3
2,642,777	+				-1.0
2,642,777	+				+0.3
2,642,792	+				+2.1
2,642,792	+				-0.9
2,642,883	+				+0.2
2,642,893	-				+0.6
2,642,893	-				-2.0
2,642,908	+				-0.2
2,642,908	+				-0.7
2,642,908	+				+1.0
2,642,909	-		DZA65_RS12370	0.10	+1.8
2,642,909	-		DZA65_RS12370	0.10	+0.8
2,642,909	-		DZA65_RS12370	0.10	-0.7
2,642,909	-		DZA65_RS12370	0.10	-1.2
2,642,909	-		DZA65_RS12370	0.10	+0.1
2,642,912	-		DZA65_RS12370	0.10	-1.7
2,642,945	-		DZA65_RS12370	0.13	-2.1
2,642,965	-		DZA65_RS12370	0.15	-1.5
2,642,965	-		DZA65_RS12370	0.15	+1.4
2,643,006	+		DZA65_RS12370	0.18	-0.7
2,643,006	+		DZA65_RS12370	0.18	-1.0
2,643,006	+		DZA65_RS12370	0.18	-1.5
2,643,007	-		DZA65_RS12370	0.18	-0.7
2,643,059	+		DZA65_RS12370	0.23	-0.7
2,643,065	-		DZA65_RS12370	0.23	-2.5
2,643,180	+		DZA65_RS12370	0.33	-0.2
2,643,181	-		DZA65_RS12370	0.33	-1.2
2,643,181	-		DZA65_RS12370	0.33	+0.5
2,643,181	-		DZA65_RS12370	0.33	+0.8
2,643,397	+		DZA65_RS12370	0.51	+0.6
2,643,503	+		DZA65_RS12370	0.60	+0.8
2,643,504	-		DZA65_RS12370	0.60	+1.4
2,643,613	+		DZA65_RS12370	0.70	+1.4
2,643,682	+		DZA65_RS12370	0.76	-1.2
2,643,729	+		DZA65_RS12370	0.80	-2.2
2,643,730	-		DZA65_RS12370	0.80	-1.3
2,643,792	+		DZA65_RS12370	0.85	-0.7
2,643,792	+		DZA65_RS12370	0.85	+1.1
2,643,792	+		DZA65_RS12370	0.85	-0.7
2,643,792	+		DZA65_RS12370	0.85	+2.5
2,643,792	+		DZA65_RS12370	0.85	-0.1
2,643,792	+		DZA65_RS12370	0.85	-0.8
2,643,793	-		DZA65_RS12370	0.85	+1.3
2,643,852	+				+2.6
2,643,853	-				-1.7
2,643,853	-				+0.8
2,643,931	+				-0.1
2,643,932	-				+0.6
2,643,969	+				+0.0
2,643,970	-				-0.7
2,643,997	+				-0.9
2,643,997	+				-0.2
2,643,998	-				-0.2
2,643,998	-				+3.0
2,644,020	-				-1.5
2,644,032	-				+2.4
2,644,078	+				+0.8
2,644,079	-				+0.6
2,644,079	-				+1.8
2,644,079	-				-2.0
2,644,102	+				-0.7
2,644,103	-				+0.3
2,644,103	-				+1.0
2,644,193	+		DZA65_RS12375	0.19	-3.4
2,644,257	-		DZA65_RS12375	0.27	+0.5
2,644,287	+		DZA65_RS12375	0.31	-2.1
2,644,287	+		DZA65_RS12375	0.31	-1.2
2,644,287	+		DZA65_RS12375	0.31	+1.2
2,644,287	+		DZA65_RS12375	0.31	+2.4
2,644,288	-		DZA65_RS12375	0.31	-1.5
2,644,288	-		DZA65_RS12375	0.31	-1.5
2,644,288	-		DZA65_RS12375	0.31	-0.2
2,644,288	-		DZA65_RS12375	0.31	-1.2
2,644,288	-		DZA65_RS12375	0.31	-0.2
2,644,288	-		DZA65_RS12375	0.31	-2.3
2,644,288	-		DZA65_RS12375	0.31	-0.0
2,644,288	-		DZA65_RS12375	0.31	+1.7
2,644,288	-		DZA65_RS12375	0.31	+1.3
2,644,333	-		DZA65_RS12375	0.36	-0.7
2,644,355	-		DZA65_RS12375	0.39	-0.2
2,644,359	+		DZA65_RS12375	0.40	-1.7
2,644,421	+		DZA65_RS12375	0.47	+0.5
2,644,502	+		DZA65_RS12375	0.58	-1.5
2,644,502	+		DZA65_RS12375	0.58	-0.4
2,644,503	-		DZA65_RS12375	0.58	-0.2
2,644,504	+		DZA65_RS12375	0.58	+0.3
2,644,504	+		DZA65_RS12375	0.58	+1.8
2,644,504	+		DZA65_RS12375	0.58	-1.5
2,644,504	+		DZA65_RS12375	0.58	-2.0
2,644,504	+		DZA65_RS12375	0.58	-1.2
2,644,504	+		DZA65_RS12375	0.58	-1.2
2,644,504	+		DZA65_RS12375	0.58	-1.2
2,644,504	+		DZA65_RS12375	0.58	-1.5
2,644,505	-		DZA65_RS12375	0.58	+0.1
2,644,505	-		DZA65_RS12375	0.58	+1.1
2,644,505	-		DZA65_RS12375	0.58	+0.1
2,644,505	-		DZA65_RS12375	0.58	-1.2
2,644,505	-		DZA65_RS12375	0.58	-0.5
2,644,505	-		DZA65_RS12375	0.58	-1.2
2,644,505	-		DZA65_RS12375	0.58	-0.5
2,644,505	-		DZA65_RS12375	0.58	-1.7
2,644,505	-		DZA65_RS12375	0.58	+1.0
2,644,728	+		DZA65_RS12375	0.86	-0.2
2,644,731	+		DZA65_RS12375	0.87	-0.2
2,644,731	+		DZA65_RS12375	0.87	-2.5
2,644,732	-		DZA65_RS12375	0.87	-0.5
2,644,839	+				-1.2
2,644,839	+				-0.2
2,644,873	+				-0.2
2,644,873	+				+0.0
2,644,873	+				-0.2
2,644,873	+				-0.4
2,644,873	+				+1.3
2,644,873	+				-0.1
2,644,873	+				-0.6
2,644,873	+				+0.1
2,644,874	-				+1.1
2,644,874	-				+2.0
2,644,874	-				+0.8