Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11230

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
2,379,466	+		DZA65_RS11225	0.41	-1.5
2,379,499	+		DZA65_RS11225	0.44	-1.8
2,379,538	+		DZA65_RS11225	0.46	-2.2
2,379,538	+		DZA65_RS11225	0.46	-2.6
2,379,586	+		DZA65_RS11225	0.50	-1.8
2,379,586	+		DZA65_RS11225	0.50	-1.5
2,379,598	+		DZA65_RS11225	0.50	-0.8
2,379,628	+		DZA65_RS11225	0.53	+1.2
2,379,635	+		DZA65_RS11225	0.53	-3.5
2,379,635	+		DZA65_RS11225	0.53	-1.2
2,379,649	+		DZA65_RS11225	0.54	-0.8
2,379,650	-		DZA65_RS11225	0.54	+0.1
2,379,650	-		DZA65_RS11225	0.54	-1.3
2,379,650	-		DZA65_RS11225	0.54	+0.3
2,379,653	+		DZA65_RS11225	0.54	-0.5
2,379,653	+		DZA65_RS11225	0.54	+0.8
2,379,653	+		DZA65_RS11225	0.54	-1.1
2,379,653	+		DZA65_RS11225	0.54	-0.2
2,379,653	+		DZA65_RS11225	0.54	-1.2
2,379,654	-		DZA65_RS11225	0.54	-0.1
2,379,654	-		DZA65_RS11225	0.54	-1.5
2,379,654	-		DZA65_RS11225	0.54	-1.2
2,379,654	-		DZA65_RS11225	0.54	-1.4
2,379,654	-				+1.6
2,379,654	-		DZA65_RS11225	0.54	-2.1
2,379,654	-		DZA65_RS11225	0.54	+0.8
2,379,664	+		DZA65_RS11225	0.55	+2.0
2,379,664	+		DZA65_RS11225	0.55	-0.8
2,379,665	-		DZA65_RS11225	0.55	+2.0
2,379,665	-		DZA65_RS11225	0.55	+0.1
2,379,665	-		DZA65_RS11225	0.55	+1.3
2,379,677	+		DZA65_RS11225	0.56	+0.2
2,379,677	+		DZA65_RS11225	0.56	-1.5
2,379,678	-		DZA65_RS11225	0.56	+0.2
2,379,679	+		DZA65_RS11225	0.56	+0.0
2,379,679	+		DZA65_RS11225	0.56	-2.2
2,379,679	+		DZA65_RS11225	0.56	-0.3
2,379,706	+		DZA65_RS11225	0.58	+2.3
2,379,706	+		DZA65_RS11225	0.58	-2.0
2,379,706	+		DZA65_RS11225	0.58	-2.0
2,379,706	+		DZA65_RS11225	0.58	-0.2
2,379,706	+		DZA65_RS11225	0.58	-0.2
2,379,706	+		DZA65_RS11225	0.58	-2.6
2,379,706	+		DZA65_RS11225	0.58	-1.2
2,379,707	-		DZA65_RS11225	0.58	-0.8
2,379,707	-		DZA65_RS11225	0.58	-1.8
2,379,707	-		DZA65_RS11225	0.58	-2.4
2,379,752	+				+0.8
2,379,752	+				-1.2
2,379,753	-		DZA65_RS11225	0.61	-0.5
2,379,753	-		DZA65_RS11225	0.61	-1.5
2,379,769	+		DZA65_RS11225	0.62	-0.2
2,379,770	-		DZA65_RS11225	0.62	+1.9
2,379,797	+		DZA65_RS11225	0.64	-1.5
2,379,808	+		DZA65_RS11225	0.65	+0.5
2,379,808	+		DZA65_RS11225	0.65	+1.6
2,379,808	+		DZA65_RS11225	0.65	+0.5
2,379,808	+		DZA65_RS11225	0.65	-1.2
2,379,808	+		DZA65_RS11225	0.65	-1.0
2,379,808	+		DZA65_RS11225	0.65	-1.4
2,379,809	-		DZA65_RS11225	0.65	-0.5
2,379,809	-		DZA65_RS11225	0.65	+2.8
2,379,809	-		DZA65_RS11225	0.65	-2.6
2,379,809	-		DZA65_RS11225	0.65	-1.1
2,379,809	-		DZA65_RS11225	0.65	+0.1
2,379,809	-		DZA65_RS11225	0.65	-0.4
2,379,809	-		DZA65_RS11225	0.65	-1.5
2,379,814	+		DZA65_RS11225	0.65	-1.2
2,379,853	+		DZA65_RS11225	0.68	+0.9
2,379,854	-		DZA65_RS11225	0.68	-2.0
2,379,854	-		DZA65_RS11225	0.68	+0.4
2,379,859	+		DZA65_RS11225	0.69	-2.0
2,379,859	+		DZA65_RS11225	0.69	+0.8
2,379,860	-		DZA65_RS11225	0.69	+0.3
2,379,860	-		DZA65_RS11225	0.69	-0.2
2,379,860	-		DZA65_RS11225	0.69	-1.5
2,379,902	+		DZA65_RS11225	0.72	-1.2
2,379,905	-		DZA65_RS11225	0.72	+0.4
2,379,908	+		DZA65_RS11225	0.72	-1.2
2,379,909	-		DZA65_RS11225	0.72	-1.0
2,379,932	+		DZA65_RS11225	0.74	-0.8
2,379,932	+		DZA65_RS11225	0.74	-1.3
2,379,933	-		DZA65_RS11225	0.74	+1.8
2,379,933	-		DZA65_RS11225	0.74	-0.8
2,379,950	+		DZA65_RS11225	0.75	-1.0
2,379,967	-		DZA65_RS11225	0.76	-1.4
2,380,069	-		DZA65_RS11225	0.83	+0.0
2,380,076	+		DZA65_RS11225	0.84	+1.3
2,380,105	-		DZA65_RS11225	0.86	-2.4
2,380,392	+				-0.2
2,380,393	-				+1.0
2,380,412	+				-0.4
2,380,428	+				-1.2
2,380,458	+				+0.7
2,380,469	+				-0.8
2,380,469	+				+0.8
2,380,469	+				+1.2
2,380,470	-				+0.3
2,380,470	-				+0.8
2,380,500	-				+0.5
2,380,699	+		DZA65_RS11230	0.16	-0.5
2,380,700	-		DZA65_RS11230	0.17	+0.6
2,380,700	-		DZA65_RS11230	0.17	-1.5
2,380,790	-		DZA65_RS11230	0.23	+1.4
2,380,790	-		DZA65_RS11230	0.23	+0.7
2,380,851	-		DZA65_RS11230	0.27	-3.0
2,381,128	+		DZA65_RS11230	0.46	-3.1
2,381,150	+		DZA65_RS11230	0.48	-0.6
2,381,218	+		DZA65_RS11230	0.52	-1.4
2,381,219	-				-0.8
2,381,226	-		DZA65_RS11230	0.53	+0.8
2,381,226	-		DZA65_RS11230	0.53	-0.2
2,381,226	-		DZA65_RS11230	0.53	-0.8
2,381,226	-		DZA65_RS11230	0.53	+1.8
2,381,226	-		DZA65_RS11230	0.53	-2.2
2,381,226	-		DZA65_RS11230	0.53	+1.0
2,381,226	-		DZA65_RS11230	0.53	-1.5
2,381,280	-		DZA65_RS11230	0.57	-0.3
2,381,299	+		DZA65_RS11230	0.58	+2.0
2,381,300	-		DZA65_RS11230	0.58	+0.5
2,381,351	+		DZA65_RS11230	0.62	-0.6
2,381,363	-		DZA65_RS11230	0.63	+0.8
2,381,401	+		DZA65_RS11230	0.65	-2.0
2,381,401	+		DZA65_RS11230	0.65	-1.5
2,381,401	+		DZA65_RS11230	0.65	-0.2
2,381,401	+		DZA65_RS11230	0.65	-2.6
2,381,402	-		DZA65_RS11230	0.65	-1.8
2,381,402	-		DZA65_RS11230	0.65	+0.8
2,381,402	-		DZA65_RS11230	0.65	+2.8
2,381,402	-		DZA65_RS11230	0.65	-1.5
2,381,402	-		DZA65_RS11230	0.65	+0.2
2,381,452	+		DZA65_RS11230	0.69	+2.0
2,381,452	+		DZA65_RS11230	0.69	+0.8
2,381,453	-		DZA65_RS11230	0.69	-0.9
2,381,475	-		DZA65_RS11230	0.70	+0.2
2,381,497	+		DZA65_RS11230	0.72	-0.8
2,381,497	+		DZA65_RS11230	0.72	-0.5
2,381,497	+		DZA65_RS11230	0.72	-2.2
2,381,497	+		DZA65_RS11230	0.72	+0.2
2,381,497	+		DZA65_RS11230	0.72	+0.4
2,381,498	-		DZA65_RS11230	0.72	+0.7
2,381,498	-		DZA65_RS11230	0.72	+0.6
2,381,498	-		DZA65_RS11230	0.72	+1.1
2,381,498	-		DZA65_RS11230	0.72	+1.1
2,381,498	-		DZA65_RS11230	0.72	-2.0
2,381,652	-		DZA65_RS11230	0.83	-2.2
2,381,671	+		DZA65_RS11230	0.84	+1.1
2,381,672	-		DZA65_RS11230	0.84	-0.8
2,381,672	-		DZA65_RS11230	0.84	+0.2
2,381,696	-		DZA65_RS11230	0.86	-0.9
2,381,697	+		DZA65_RS11230	0.86	-0.9
2,381,697	+		DZA65_RS11230	0.86	-2.2
2,381,697	+		DZA65_RS11230	0.86	-0.5
2,381,697	+		DZA65_RS11230	0.86	-1.2
2,381,697	+		DZA65_RS11230	0.86	-0.2
2,381,697	+		DZA65_RS11230	0.86	-0.2
2,381,698	-		DZA65_RS11230	0.86	+0.0
2,381,698	-		DZA65_RS11230	0.86	-0.4
2,381,698	-		DZA65_RS11230	0.86	-1.5
2,381,698	-		DZA65_RS11230	0.86	+2.9
2,381,698	-		DZA65_RS11230	0.86	-2.2
2,381,698	-		DZA65_RS11230	0.86	-2.0
2,381,698	-		DZA65_RS11230	0.86	-2.0
2,381,698	-		DZA65_RS11230	0.86	-1.1
2,381,721	-		DZA65_RS11230	0.87	+0.2
2,381,764	+				+1.5
2,381,764	+				-1.4
2,381,765	-				+0.4
2,381,765	-				+0.2
2,381,765	-				+0.3
2,381,765	-				+2.4
2,381,781	+				+0.6
2,381,781	+				-0.6
2,381,782	-				-2.0
2,381,788	-				-0.4
2,381,788	-				-2.2
2,381,809	+				-1.8
2,381,813	-				-1.0
2,381,824	+				+0.8
2,381,824	+				-0.8
2,381,825	-				-1.8
2,381,825	-				+1.9
2,381,836	+				-2.6
2,381,845	+				+1.8
2,381,845	+				-2.0
2,381,873	+				+1.1
2,381,873	+				+2.5
2,381,873	+				+0.0
2,381,874	-				+1.2
2,381,878	-				-0.7
2,381,878	-				-0.8
2,381,883	+				+2.1
2,381,884	-				-0.8
2,381,884	-				-2.0
2,381,884	-				+1.3
2,381,903	+				-2.2
2,381,903	+				+0.5
2,381,903	+				+1.6
2,381,904	-				+0.8
2,381,904	-				+0.4
2,381,904	-				+1.0
2,381,906	+				+3.2
2,381,906	+				-1.4
2,381,906	+				-1.9
2,381,906	+				-1.8
2,381,906	+				-0.8
2,381,906	+				+2.5
2,381,907	-				-0.1
2,381,907	-				-1.2
2,381,917	+				-1.0
2,381,918	-				-1.2
2,381,993	-				-2.0
2,382,072	+				-1.2
2,382,073	-				-0.0
2,382,073	-				+0.3
2,382,073	-				-1.8
2,382,101	-				+0.8
2,382,112	+				-0.2
2,382,112	+				-0.1
2,382,112	+				-1.4
2,382,157	+				-1.2
2,382,158	-				+1.8
2,382,219	+		DZA65_RS11235	0.11	-0.5
2,382,220	-		DZA65_RS11235	0.11	-0.2
2,382,252	+		DZA65_RS11235	0.13	+1.8
2,382,252	+		DZA65_RS11235	0.13	+0.4
2,382,252	+		DZA65_RS11235	0.13	-0.9
2,382,252	+		DZA65_RS11235	0.13	+0.4
2,382,252	+		DZA65_RS11235	0.13	-2.4
2,382,253	-		DZA65_RS11235	0.13	+0.7
2,382,253	-		DZA65_RS11235	0.13	+3.1
2,382,253	-		DZA65_RS11235	0.13	-0.8
2,382,289	+		DZA65_RS11235	0.16	-1.2
2,382,289	+		DZA65_RS11235	0.16	-2.0
2,382,290	-		DZA65_RS11235	0.16	+0.1
2,382,290	-		DZA65_RS11235	0.16	-0.4
2,382,513	+		DZA65_RS11235	0.31	-0.8
2,382,514	-		DZA65_RS11235	0.32	-1.9
2,382,514	-		DZA65_RS11235	0.32	+0.4
2,382,533	+		DZA65_RS11235	0.33	+1.8
2,382,533	+		DZA65_RS11235	0.33	-2.0
2,382,534	-		DZA65_RS11235	0.33	-0.9
2,382,556	-		DZA65_RS11235	0.35	-0.9
2,382,556	-		DZA65_RS11235	0.35	+3.0
2,382,556	-		DZA65_RS11235	0.35	+0.8
2,382,556	-		DZA65_RS11235	0.35	+1.0
2,382,556	-		DZA65_RS11235	0.35	-2.0
2,382,567	+		DZA65_RS11235	0.35	+1.4
2,382,567	+		DZA65_RS11235	0.35	+1.8
2,382,567	+		DZA65_RS11235	0.35	+0.8
2,382,567	+		DZA65_RS11235	0.35	-1.5
2,382,568	-		DZA65_RS11235	0.35	-0.1
2,382,568	-		DZA65_RS11235	0.35	-1.8
2,382,568	-		DZA65_RS11235	0.35	+0.8
2,382,568	-		DZA65_RS11235	0.35	-0.2
2,382,568	-		DZA65_RS11235	0.35	+0.2
2,382,568	-		DZA65_RS11235	0.35	-1.5
2,382,568	-		DZA65_RS11235	0.35	+0.7
2,382,568	-		DZA65_RS11235	0.35	+0.2
2,382,568	-		DZA65_RS11235	0.35	-0.2
2,382,568	-		DZA65_RS11235	0.35	+1.9
2,382,573	+		DZA65_RS11235	0.36	+0.2
2,382,573	+		DZA65_RS11235	0.36	-0.8
2,382,573	+		DZA65_RS11235	0.36	-0.8
2,382,573	+		DZA65_RS11235	0.36	+1.1
2,382,573	+		DZA65_RS11235	0.36	-0.0
2,382,573	+		DZA65_RS11235	0.36	-2.2
2,382,574	-		DZA65_RS11235	0.36	-1.4
2,382,574	-		DZA65_RS11235	0.36	+0.8
2,382,592	+		DZA65_RS11235	0.37	-1.8
2,382,643	+		DZA65_RS11235	0.41	+0.8
2,382,644	-		DZA65_RS11235	0.41	+0.8
2,382,666	+		DZA65_RS11235	0.42	-1.2
2,382,666	+		DZA65_RS11235	0.42	-2.6
2,382,666	+		DZA65_RS11235	0.42	-1.1
2,382,820	+		DZA65_RS11235	0.53	+0.8
2,382,820	+		DZA65_RS11235	0.53	-1.8
2,382,820	+		DZA65_RS11235	0.53	-0.8
2,382,821	-		DZA65_RS11235	0.53	+0.2
2,382,821	-		DZA65_RS11235	0.53	-1.2
2,382,821	-		DZA65_RS11235	0.53	+0.2
2,382,821	-		DZA65_RS11235	0.53	+0.8
2,382,821	-		DZA65_RS11235	0.53	+0.8
2,382,853	+		DZA65_RS11235	0.56	-1.8
2,382,853	+		DZA65_RS11235	0.56	-1.2
2,382,853	+		DZA65_RS11235	0.56	-1.4
2,382,854	-				-0.8
2,382,854	-		DZA65_RS11235	0.56	-2.0
2,382,854	-		DZA65_RS11235	0.56	+0.4
2,382,854	-		DZA65_RS11235	0.56	+2.7
2,382,854	-		DZA65_RS11235	0.56	-2.6
2,382,854	-		DZA65_RS11235	0.56	-0.8