Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS19650

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
4,253,372	-		DZA65_RS19645	0.18	+0.4
4,253,422	+		DZA65_RS19645	0.23	+2.5
4,253,422	+		DZA65_RS19645	0.23	-0.9
4,253,422	+		DZA65_RS19645	0.23	+0.1
4,253,422	+		DZA65_RS19645	0.23	-1.7
4,253,423	-		DZA65_RS19645	0.23	-2.8
4,253,423	-		DZA65_RS19645	0.23	-0.9
4,253,426	+		DZA65_RS19645	0.23	-1.3
4,253,427	-		DZA65_RS19645	0.23	-1.5
4,253,445	-		DZA65_RS19645	0.25	-0.9
4,253,474	+		DZA65_RS19645	0.28	+0.1
4,253,476	+		DZA65_RS19645	0.28	+0.1
4,253,476	+		DZA65_RS19645	0.28	-1.3
4,253,477	-		DZA65_RS19645	0.28	+0.7
4,253,524	+		DZA65_RS19645	0.33	-1.5
4,253,524	+		DZA65_RS19645	0.33	+0.1
4,253,524	+		DZA65_RS19645	0.33	-1.9
4,253,524	+		DZA65_RS19645	0.33	-1.3
4,253,525	-		DZA65_RS19645	0.33	-2.3
4,253,525	-		DZA65_RS19645	0.33	-0.5
4,253,525	-		DZA65_RS19645	0.33	-1.9
4,253,525	-		DZA65_RS19645	0.33	+0.1
4,253,525	-		DZA65_RS19645	0.33	+0.1
4,253,533	+		DZA65_RS19645	0.34	-0.5
4,253,534	-		DZA65_RS19645	0.34	-0.5
4,253,534	-		DZA65_RS19645	0.34	-1.9
4,253,534	-		DZA65_RS19645	0.34	+0.5
4,253,534	-		DZA65_RS19645	0.34	+1.1
4,253,534	-		DZA65_RS19645	0.34	-2.0
4,253,534	-		DZA65_RS19645	0.34	+0.1
4,253,559	-		DZA65_RS19645	0.36	-0.9
4,253,559	-		DZA65_RS19645	0.36	-2.3
4,253,559	-		DZA65_RS19645	0.36	-0.9
4,253,559	-		DZA65_RS19645	0.36	-0.5
4,253,563	+		DZA65_RS19645	0.37	-2.5
4,253,563	+				+1.1
4,253,563	+		DZA65_RS19645	0.37	+0.1
4,253,563	+		DZA65_RS19645	0.37	+0.2
4,253,563	+		DZA65_RS19645	0.37	-1.7
4,253,564	-		DZA65_RS19645	0.37	-0.0
4,253,564	-		DZA65_RS19645	0.37	-1.3
4,253,564	-		DZA65_RS19645	0.37	+1.1
4,253,564	-		DZA65_RS19645	0.37	-1.5
4,253,564	-		DZA65_RS19645	0.37	+0.1
4,253,584	+		DZA65_RS19645	0.39	-0.9
4,253,584	+		DZA65_RS19645	0.39	-0.1
4,253,584	+		DZA65_RS19645	0.39	-1.7
4,253,584	+		DZA65_RS19645	0.39	-2.4
4,253,584	+		DZA65_RS19645	0.39	-1.4
4,253,584	+		DZA65_RS19645	0.39	-1.3
4,253,585	-		DZA65_RS19645	0.39	-1.3
4,253,585	-		DZA65_RS19645	0.39	-2.8
4,253,585	-		DZA65_RS19645	0.39	-2.1
4,253,585	-		DZA65_RS19645	0.39	-0.2
4,253,653	+		DZA65_RS19645	0.46	-0.5
4,253,653	+		DZA65_RS19645	0.46	-0.9
4,253,653	+		DZA65_RS19645	0.46	-1.4
4,253,653	+		DZA65_RS19645	0.46	+0.5
4,253,653	+		DZA65_RS19645	0.46	-2.4
4,253,653	+		DZA65_RS19645	0.46	-0.4
4,253,653	+		DZA65_RS19645	0.46	-0.9
4,253,653	+		DZA65_RS19645	0.46	-0.5
4,253,653	+		DZA65_RS19645	0.46	+0.1
4,253,653	+		DZA65_RS19645	0.46	+0.1
4,253,654	-		DZA65_RS19645	0.46	+0.3
4,253,654	-		DZA65_RS19645	0.46	-1.0
4,253,654	-		DZA65_RS19645	0.46	-0.5
4,253,654	-		DZA65_RS19645	0.46	-0.9
4,253,654	-		DZA65_RS19645	0.46	-0.9
4,253,654	-		DZA65_RS19645	0.46	-2.1
4,253,654	-		DZA65_RS19645	0.46	-0.5
4,253,654	-		DZA65_RS19645	0.46	+1.1
4,253,654	-		DZA65_RS19645	0.46	-0.5
4,253,654	-		DZA65_RS19645	0.46	-2.5
4,253,654	-		DZA65_RS19645	0.46	-0.5
4,253,654	-		DZA65_RS19645	0.46	-1.4
4,253,654	-		DZA65_RS19645	0.46	-1.3
4,253,657	+		DZA65_RS19645	0.46	-1.7
4,253,657	+		DZA65_RS19645	0.46	-1.9
4,253,657	+		DZA65_RS19645	0.46	+0.5
4,253,657	+		DZA65_RS19645	0.46	-0.5
4,253,658	-		DZA65_RS19645	0.46	+1.1
4,253,658	-		DZA65_RS19645	0.46	-0.1
4,253,686	+		DZA65_RS19645	0.49	-1.5
4,253,686	+		DZA65_RS19645	0.49	+0.5
4,253,686	+		DZA65_RS19645	0.49	+1.1
4,253,686	+		DZA65_RS19645	0.49	-1.6
4,253,686	+		DZA65_RS19645	0.49	-1.5
4,253,687	-		DZA65_RS19645	0.49	-0.9
4,253,687	-		DZA65_RS19645	0.49	-1.2
4,253,687	-		DZA65_RS19645	0.49	-2.3
4,253,687	-		DZA65_RS19645	0.49	+0.5
4,253,687	-		DZA65_RS19645	0.49	-2.5
4,253,710	+		DZA65_RS19645	0.51	+1.1
4,253,710	+		DZA65_RS19645	0.51	-1.2
4,253,712	+		DZA65_RS19645	0.52	-1.2
4,253,712	+		DZA65_RS19645	0.52	-0.9
4,253,712	+		DZA65_RS19645	0.52	-2.9
4,253,712	+		DZA65_RS19645	0.52	-1.9
4,253,712	+		DZA65_RS19645	0.52	-2.0
4,253,713	-		DZA65_RS19645	0.52	-1.7
4,253,717	+		DZA65_RS19645	0.52	-1.6
4,253,717	+		DZA65_RS19645	0.52	-1.5
4,253,717	+		DZA65_RS19645	0.52	-1.4
4,253,718	-		DZA65_RS19645	0.52	-0.3
4,253,718	-		DZA65_RS19645	0.52	-0.7
4,253,718	-		DZA65_RS19645	0.52	-0.9
4,253,719	+		DZA65_RS19645	0.52	-2.1
4,253,719	+		DZA65_RS19645	0.52	-1.3
4,253,719	+		DZA65_RS19645	0.52	-1.7
4,253,720	-		DZA65_RS19645	0.52	-2.4
4,253,720	-		DZA65_RS19645	0.52	-2.1
4,253,720	-		DZA65_RS19645	0.52	-0.7
4,253,720	-		DZA65_RS19645	0.52	+1.1
4,253,800	+		DZA65_RS19645	0.60	+0.1
4,253,800	+		DZA65_RS19645	0.60	+0.2
4,253,804	+		DZA65_RS19645	0.61	+1.1
4,253,804	+		DZA65_RS19645	0.61	-0.0
4,253,804	+		DZA65_RS19645	0.61	-1.7
4,253,805	-		DZA65_RS19645	0.61	-1.5
4,253,872	-		DZA65_RS19645	0.68	-0.5
4,253,872	-		DZA65_RS19645	0.68	-0.5
4,253,872	-		DZA65_RS19645	0.68	-0.7
4,253,872	-		DZA65_RS19645	0.68	-0.4
4,253,878	+		DZA65_RS19645	0.68	-1.3
4,253,878	+		DZA65_RS19645	0.68	-0.9
4,253,878	+		DZA65_RS19645	0.68	-2.3
4,253,878	+		DZA65_RS19645	0.68	-1.8
4,253,878	+		DZA65_RS19645	0.68	-3.8
4,253,878	+		DZA65_RS19645	0.68	-1.7
4,253,879	-		DZA65_RS19645	0.68	+1.9
4,253,879	-		DZA65_RS19645	0.68	-2.5
4,253,879	-		DZA65_RS19645	0.68	-0.9
4,253,879	-		DZA65_RS19645	0.68	-1.5
4,253,879	-		DZA65_RS19645	0.68	-2.3
4,253,912	+		DZA65_RS19645	0.72	-2.3
4,253,913	-		DZA65_RS19645	0.72	-0.5
4,253,995	+		DZA65_RS19645	0.80	-0.7
4,253,996	-		DZA65_RS19645	0.80	-2.3
4,254,056	+		DZA65_RS19645	0.86	+0.5
4,254,057	-		DZA65_RS19645	0.86	-0.9
4,254,176	+				+0.1
4,254,197	+				-3.0
4,254,197	+				-0.5
4,254,197	+				-2.1
4,254,198	-				+0.1
4,254,204	-				-0.5
4,254,204	-				-1.9
4,254,204	-				+1.9
4,254,288	+				-0.8
4,254,292	+				-0.5
4,254,293	-				+0.1
4,254,308	+				-0.1
4,254,315	+				+0.3
4,254,327	+				+0.1
4,254,328	-				-1.5
4,254,352	+				-2.8
4,254,352	+				-0.5
4,254,352	+				-1.9
4,254,353	-				+3.5
4,254,354	+				+2.1
4,254,354	+				-1.5
4,254,354	+				-1.1
4,254,354	+				-0.2
4,254,354	+				+0.8
4,254,355	-				-1.9
4,254,355	-				-0.5
4,254,355	-				+2.1
4,254,355	-				-1.9
4,254,355	-				-0.5
4,254,355	-				+0.9
4,254,367	+				+1.4
4,254,367	+				+0.1
4,254,367	+				-0.5
4,254,367	+				+1.5
4,254,368	-				-0.3
4,254,368	-				+0.6
4,254,368	-				-0.1
4,254,373	+				+1.8
4,254,373	+				+3.2
4,254,373	+				+1.5
4,254,374	-				+1.0
4,254,374	-				+1.6
4,254,374	-				+1.1
4,254,384	+				-1.5
4,254,464	-				+1.8
4,254,484	+				+0.3
4,254,484	+				+2.8
4,254,484	+				+0.4
4,254,485	-				-1.9
4,254,485	-				+0.2
4,254,489	+				-0.3
4,254,489	+				-0.9
4,254,490	-				-0.9
4,254,508	+		DZA65_RS19650	0.10	-0.5
4,254,508	+		DZA65_RS19650	0.10	-2.6
4,254,509	-		DZA65_RS19650	0.10	+1.6
4,254,509	-		DZA65_RS19650	0.10	+0.3
4,254,509	-		DZA65_RS19650	0.10	-0.9
4,254,525	-		DZA65_RS19650	0.11	-0.3
4,254,622	+		DZA65_RS19650	0.18	+0.1
4,254,623	-		DZA65_RS19650	0.18	+0.3
4,254,623	-		DZA65_RS19650	0.18	+0.8
4,254,623	-		DZA65_RS19650	0.18	-0.9
4,254,623	-		DZA65_RS19650	0.18	-0.5
4,254,629	+		DZA65_RS19650	0.19	+1.3
4,254,629	+		DZA65_RS19650	0.19	-1.6
4,254,629	+		DZA65_RS19650	0.19	+0.4
4,254,629	+		DZA65_RS19650	0.19	-1.5
4,254,629	+		DZA65_RS19650	0.19	+1.6
4,254,629	+		DZA65_RS19650	0.19	+2.4
4,254,629	+		DZA65_RS19650	0.19	-0.9
4,254,629	+		DZA65_RS19650	0.19	-1.7
4,254,629	+		DZA65_RS19650	0.19	+0.2
4,254,629	+		DZA65_RS19650	0.19	+1.4
4,254,629	+		DZA65_RS19650	0.19	+0.1
4,254,630	-		DZA65_RS19650	0.19	-1.9
4,254,630	-		DZA65_RS19650	0.19	-1.7
4,254,630	-		DZA65_RS19650	0.19	-2.6
4,254,630	-		DZA65_RS19650	0.19	+2.1
4,254,630	-		DZA65_RS19650	0.19	-0.2
4,254,630	-		DZA65_RS19650	0.19	+1.3
4,254,630	-		DZA65_RS19650	0.19	-0.5
4,254,630	-		DZA65_RS19650	0.19	+1.6
4,254,630	-		DZA65_RS19650	0.19	-2.2
4,254,631	+		DZA65_RS19650	0.19	+0.4
4,254,631	+		DZA65_RS19650	0.19	+0.6
4,254,631	+		DZA65_RS19650	0.19	-1.3
4,254,631	+		DZA65_RS19650	0.19	-0.3
4,254,631	+		DZA65_RS19650	0.19	-2.7
4,254,631	+		DZA65_RS19650	0.19	+0.1
4,254,631	+		DZA65_RS19650	0.19	-0.2
4,254,631	+		DZA65_RS19650	0.19	-1.6
4,254,631	+		DZA65_RS19650	0.19	+2.2
4,254,631	+		DZA65_RS19650	0.19	+0.1
4,254,631	+		DZA65_RS19650	0.19	+1.4
4,254,631	+		DZA65_RS19650	0.19	+1.1
4,254,631	+		DZA65_RS19650	0.19	-0.1
4,254,631	+		DZA65_RS19650	0.19	+0.2
4,254,632	-		DZA65_RS19650	0.19	-0.5
4,254,632	-		DZA65_RS19650	0.19	+0.5
4,254,632	-		DZA65_RS19650	0.19	+1.3
4,254,632	-		DZA65_RS19650	0.19	-2.5
4,254,632	-		DZA65_RS19650	0.19	+0.4
4,254,632	-		DZA65_RS19650	0.19	-0.5
4,254,632	-		DZA65_RS19650	0.19	+0.7
4,254,632	-		DZA65_RS19650	0.19	-1.3
4,254,632	-		DZA65_RS19650	0.19	+1.4
4,254,632	-		DZA65_RS19650	0.19	-1.9
4,254,632	-		DZA65_RS19650	0.19	+0.2
4,254,632	-		DZA65_RS19650	0.19	+1.1
4,254,632	-		DZA65_RS19650	0.19	+0.1
4,254,632	-		DZA65_RS19650	0.19	+0.3
4,254,632	-		DZA65_RS19650	0.19	+0.1
4,254,632	-		DZA65_RS19650	0.19	+2.1
4,254,632	-		DZA65_RS19650	0.19	+1.2
4,254,632	-		DZA65_RS19650	0.19	+4.2
4,254,632	-		DZA65_RS19650	0.19	-0.8
4,254,632	-		DZA65_RS19650	0.19	+3.7
4,254,632	-		DZA65_RS19650	0.19	-0.9
4,254,632	-		DZA65_RS19650	0.19	-0.5
4,254,632	-		DZA65_RS19650	0.19	-0.8
4,254,632	-		DZA65_RS19650	0.19	-0.5
4,254,632	-		DZA65_RS19650	0.19	-0.4
4,254,632	-		DZA65_RS19650	0.19	+1.7
4,254,632	-		DZA65_RS19650	0.19	-2.1
4,254,725	-		DZA65_RS19650	0.26	-0.2
4,254,851	+		DZA65_RS19650	0.35	-1.5
4,254,852	-		DZA65_RS19650	0.35	+0.1
4,254,893	+		DZA65_RS19650	0.38	+0.7
4,254,893	+		DZA65_RS19650	0.38	-0.1
4,254,893	+		DZA65_RS19650	0.38	-1.5
4,254,893	+		DZA65_RS19650	0.38	-1.5
4,254,893	+		DZA65_RS19650	0.38	-1.7
4,254,894	-		DZA65_RS19650	0.38	-0.9
4,254,894	-		DZA65_RS19650	0.38	-1.5
4,254,909	+		DZA65_RS19650	0.39	-2.4
4,254,909	+		DZA65_RS19650	0.39	-2.6
4,254,909	+		DZA65_RS19650	0.39	-0.3
4,255,149	+		DZA65_RS19650	0.56	-0.9
4,255,149	+		DZA65_RS19650	0.56	+0.1
4,255,149	+		DZA65_RS19650	0.56	-0.7
4,255,150	-		DZA65_RS19650	0.57	+1.9
4,255,150	-		DZA65_RS19650	0.57	-1.9
4,255,150	-		DZA65_RS19650	0.57	-0.3
4,255,150	-		DZA65_RS19650	0.57	+1.1
4,255,150	-		DZA65_RS19650	0.57	-1.3
4,255,150	-		DZA65_RS19650	0.57	-0.5
4,255,151	+		DZA65_RS19650	0.57	+0.1
4,255,151	+		DZA65_RS19650	0.57	-0.9
4,255,151	+		DZA65_RS19650	0.57	+0.3
4,255,151	+		DZA65_RS19650	0.57	+1.1
4,255,152	-		DZA65_RS19650	0.57	+0.1
4,255,152	-		DZA65_RS19650	0.57	+1.9
4,255,152	-		DZA65_RS19650	0.57	-0.3
4,255,152	-		DZA65_RS19650	0.57	-1.3
4,255,152	-		DZA65_RS19650	0.57	+2.1
4,255,152	-		DZA65_RS19650	0.57	-0.4
4,255,152	-		DZA65_RS19650	0.57	-0.0
4,255,164	+		DZA65_RS19650	0.58	-0.2
4,255,164	+		DZA65_RS19650	0.58	+0.4
4,255,164	+		DZA65_RS19650	0.58	+1.4
4,255,164	+		DZA65_RS19650	0.58	+0.8
4,255,165	-		DZA65_RS19650	0.58	-2.7
4,255,165	-		DZA65_RS19650	0.58	+0.0
4,255,165	-		DZA65_RS19650	0.58	+0.3
4,255,165	-		DZA65_RS19650	0.58	-0.0
4,255,213	+		DZA65_RS19650	0.61	-1.2
4,255,346	+		DZA65_RS19650	0.71	-0.2
4,255,346	+		DZA65_RS19650	0.71	-0.9
4,255,488	+		DZA65_RS19650	0.81	-1.3
4,255,540	+		DZA65_RS19650	0.85	+1.1
4,255,540	+		DZA65_RS19650	0.85	+1.2
4,255,540	+		DZA65_RS19650	0.85	-0.3
4,255,540	+		DZA65_RS19650	0.85	+1.6
4,255,541	-		DZA65_RS19650	0.85	-0.5
4,255,541	-		DZA65_RS19650	0.85	-2.1
4,255,541	-		DZA65_RS19650	0.85	-1.8
4,255,541	-		DZA65_RS19650	0.85	-0.9
4,255,541	-		DZA65_RS19650	0.85	+0.6
4,255,618	-				-0.7
4,255,654	+				+0.1
4,255,655	-				+1.8
4,255,655	-				-1.1
4,255,655	-				-2.6
4,255,655	-				-1.7
4,255,655	-				+0.1
4,255,655	-				+1.5
4,255,655	-				+2.1
4,255,663	-				-1.5
4,255,687	+				+0.2
4,255,688	-				+1.1
4,255,688	-				+0.7
4,255,688	-				-1.5
4,255,702	-				-1.7
4,255,702	-				+1.1
4,255,770	+				+2.1
4,255,770	+				+0.1
4,255,770	+				-1.5
4,255,770	+				+1.1
4,255,770	+				-1.3
4,255,770	+				+0.1
4,255,770	+				-1.3
4,255,771	-				+0.8
4,255,771	-				-0.5
4,255,771	-				-1.5
4,255,771	-				-0.3
4,255,771	-				-1.3
4,255,771	-				+0.8
4,255,804	+				-0.8
4,255,856	+				+0.7
4,255,856	+				+0.4
4,255,856	+				+1.7
4,255,856	+				+1.5
4,255,857	-				-0.3
4,255,958	+				-1.7
4,255,989	-		DZA65_RS19655	0.10	-3.8
4,256,451	+		DZA65_RS19655	0.46	-4.3
4,256,651	+		DZA65_RS19655	0.61	-0.7
4,256,741	+		DZA65_RS19655	0.68	-2.6