Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13935

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
2,992,597	+				-2.6
2,992,601	-				-3.7
2,992,601	-				-0.9
2,992,653	-		DZA65_RS13930	0.12	-1.6
2,992,653	-		DZA65_RS13930	0.12	-3.2
2,992,653	-		DZA65_RS13930	0.12	-1.5
2,992,664	-		DZA65_RS13930	0.13	-1.8
2,992,778	-		DZA65_RS13930	0.24	-1.9
2,992,805	+		DZA65_RS13930	0.27	-2.5
2,992,806	-		DZA65_RS13930	0.27	-0.9
2,992,827	+		DZA65_RS13930	0.29	-4.4
2,992,828	-		DZA65_RS13930	0.29	-2.0
2,992,854	+		DZA65_RS13930	0.31	-2.0
2,992,854	+		DZA65_RS13930	0.31	-2.3
2,992,854	+		DZA65_RS13930	0.31	-0.3
2,992,854	+		DZA65_RS13930	0.31	-5.0
2,992,854	+		DZA65_RS13930	0.31	-1.6
2,992,854	+		DZA65_RS13930	0.31	-1.3
2,992,854	+		DZA65_RS13930	0.31	-2.9
2,992,854	+		DZA65_RS13930	0.31	-0.2
2,992,854	+		DZA65_RS13930	0.31	-0.7
2,992,854	+		DZA65_RS13930	0.31	-3.2
2,992,854	+		DZA65_RS13930	0.31	-1.3
2,992,855	-		DZA65_RS13930	0.31	-2.9
2,992,855	-		DZA65_RS13930	0.31	-0.6
2,992,855	-		DZA65_RS13930	0.31	-2.3
2,992,912	+		DZA65_RS13930	0.37	-2.8
2,992,978	+		DZA65_RS13930	0.44	-3.8
2,992,978	+		DZA65_RS13930	0.44	-3.4
2,992,985	-		DZA65_RS13930	0.44	-3.3
2,992,985	-		DZA65_RS13930	0.44	-2.3
2,993,015	-		DZA65_RS13930	0.47	-2.5
2,993,015	-		DZA65_RS13930	0.47	+0.1
2,993,033	+		DZA65_RS13930	0.49	-1.1
2,993,033	+		DZA65_RS13930	0.49	+1.7
2,993,033	+		DZA65_RS13930	0.49	-1.6
2,993,034	-		DZA65_RS13930	0.49	-1.6
2,993,034	-		DZA65_RS13930	0.49	-2.9
2,993,034	-		DZA65_RS13930	0.49	+0.0
2,993,034	-		DZA65_RS13930	0.49	-0.3
2,993,034	-		DZA65_RS13930	0.49	-3.2
2,993,034	-		DZA65_RS13930	0.49	-0.6
2,993,057	+		DZA65_RS13930	0.51	-0.3
2,993,058	-		DZA65_RS13930	0.51	-2.1
2,993,058	-		DZA65_RS13930	0.51	-1.3
2,993,064	+		DZA65_RS13930	0.52	-3.3
2,993,064	+		DZA65_RS13930	0.52	-1.9
2,993,064	+		DZA65_RS13930	0.52	-3.6
2,993,064	+		DZA65_RS13930	0.52	-3.2
2,993,064	+		DZA65_RS13930	0.52	-1.9
2,993,064	+		DZA65_RS13930	0.52	-3.0
2,993,064	+		DZA65_RS13930	0.52	-0.6
2,993,064	+		DZA65_RS13930	0.52	-5.0
2,993,064	+		DZA65_RS13930	0.52	+0.7
2,993,064	+		DZA65_RS13930	0.52	-0.9
2,993,064	+		DZA65_RS13930	0.52	-0.6
2,993,064	+		DZA65_RS13930	0.52	-2.3
2,993,064	+		DZA65_RS13930	0.52	-4.9
2,993,065	-		DZA65_RS13930	0.52	-5.0
2,993,065	-		DZA65_RS13930	0.52	-2.1
2,993,065	-		DZA65_RS13930	0.52	-1.0
2,993,065	-		DZA65_RS13930	0.52	-0.3
2,993,065	-		DZA65_RS13930	0.52	-4.1
2,993,065	-		DZA65_RS13930	0.52	-1.1
2,993,065	-		DZA65_RS13930	0.52	-2.8
2,993,075	+		DZA65_RS13930	0.53	-2.3
2,993,075	+		DZA65_RS13930	0.53	-3.2
2,993,075	+		DZA65_RS13930	0.53	-2.3
2,993,075	+		DZA65_RS13930	0.53	-2.8
2,993,076	-		DZA65_RS13930	0.53	-0.6
2,993,076	-		DZA65_RS13930	0.53	-2.5
2,993,076	-		DZA65_RS13930	0.53	-3.0
2,993,076	-				-1.6
2,993,098	-		DZA65_RS13930	0.55	-4.3
2,993,132	-		DZA65_RS13930	0.59	-2.5
2,993,188	+		DZA65_RS13930	0.64	-0.9
2,993,188	+		DZA65_RS13930	0.64	-1.3
2,993,188	+		DZA65_RS13930	0.64	-2.6
2,993,189	-		DZA65_RS13930	0.64	-1.3
2,993,189	-		DZA65_RS13930	0.64	-1.9
2,993,189	-		DZA65_RS13930	0.64	-1.5
2,993,189	-		DZA65_RS13930	0.64	-0.6
2,993,195	-		DZA65_RS13930	0.65	-1.9
2,993,195	-		DZA65_RS13930	0.65	-4.0
2,993,211	+		DZA65_RS13930	0.66	-1.4
2,993,211	+		DZA65_RS13930	0.66	-3.7
2,993,211	+		DZA65_RS13930	0.66	-1.8
2,993,211	+		DZA65_RS13930	0.66	-1.1
2,993,211	+		DZA65_RS13930	0.66	-3.8
2,993,212	-		DZA65_RS13930	0.67	-1.6
2,993,212	-		DZA65_RS13930	0.67	-2.2
2,993,212	-		DZA65_RS13930	0.67	-0.1
2,993,212	-		DZA65_RS13930	0.67	-2.1
2,993,301	+		DZA65_RS13930	0.75	-3.1
2,993,301	+		DZA65_RS13930	0.75	-2.1
2,993,301	+		DZA65_RS13930	0.75	-2.5
2,993,301	+		DZA65_RS13930	0.75	-3.2
2,993,302	-		DZA65_RS13930	0.75	-1.3
2,993,302	-		DZA65_RS13930	0.75	+0.1
2,993,302	-		DZA65_RS13930	0.75	-3.6
2,993,386	+		DZA65_RS13930	0.84	-3.6
2,993,386	+		DZA65_RS13930	0.84	-2.2
2,993,386	+		DZA65_RS13930	0.84	-2.8
2,993,387	-		DZA65_RS13930	0.84	-1.6
2,993,387	-		DZA65_RS13930	0.84	-4.0
2,993,401	+		DZA65_RS13930	0.85	-2.5
2,993,401	+		DZA65_RS13930	0.85	-2.6
2,993,461	+				-4.3
2,993,461	+				-5.4
2,993,461	+				-2.8
2,993,466	+				-1.6
2,993,466	+				-1.6
2,993,466	+				-2.7
2,993,466	+				-0.9
2,993,466	+				+0.2
2,993,466	+				-0.3
2,993,466	+				-4.5
2,993,467	-				-3.0
2,993,467	-				-1.3
2,993,467	-				-0.9
2,993,467	-				-0.6
2,993,467	-				-2.5
2,993,467	-				-1.6
2,993,467	-				-1.1
2,993,478	-				-0.3
2,993,478	-				-4.1
2,993,478	-				-3.0
2,993,478	-				-1.9
2,993,478	-				-2.8
2,993,503	+				-1.9
2,993,515	-				-2.1
2,993,609	+		DZA65_RS13935	0.16	-3.6
2,993,610	-		DZA65_RS13935	0.16	-1.6
2,993,657	+		DZA65_RS13935	0.27	-1.3
2,993,658	-		DZA65_RS13935	0.27	-2.8
2,993,658	-		DZA65_RS13935	0.27	-1.6
2,993,706	-		DZA65_RS13935	0.39	-3.6
2,993,744	-		DZA65_RS13935	0.48	+0.7
2,993,744	-		DZA65_RS13935	0.48	-0.3
2,993,757	-		DZA65_RS13935	0.51	+0.2
2,993,768	+		DZA65_RS13935	0.54	-0.9
2,993,769	-		DZA65_RS13935	0.54	-1.1
2,993,898	+		DZA65_RS13935	0.85	-2.9
2,993,898	+		DZA65_RS13935	0.85	-3.7
2,993,898	+		DZA65_RS13935	0.85	-0.6
2,993,898	+		DZA65_RS13935	0.85	-1.6
2,993,899	-		DZA65_RS13935	0.85	-2.1
2,993,899	-		DZA65_RS13935	0.85	+1.0
2,993,899	-		DZA65_RS13935	0.85	-2.6
2,993,899	-		DZA65_RS13935	0.85	-2.8
2,993,899	-		DZA65_RS13935	0.85	-2.1
2,993,899	-		DZA65_RS13935	0.85	-1.5
2,993,899	-		DZA65_RS13935	0.85	-2.8
2,993,899	-		DZA65_RS13935	0.85	-2.9
2,993,899	-		DZA65_RS13935	0.85	-1.3
2,993,899	-		DZA65_RS13935	0.85	+1.5
2,993,899	-		DZA65_RS13935	0.85	-0.6
2,993,899	-		DZA65_RS13935	0.85	+1.3
2,993,899	-		DZA65_RS13935	0.85	-2.6
2,993,910	-		DZA65_RS13935	0.88	-1.6
2,993,910	-		DZA65_RS13935	0.88	-3.2
2,993,910	-		DZA65_RS13935	0.88	-3.0
2,993,912	+		DZA65_RS13935	0.88	-2.5
2,993,912	+		DZA65_RS13935	0.88	-2.3
2,993,921	+				-1.5
2,993,921	+				+0.0
2,993,921	+				-0.3
2,993,922	-				-3.5
2,993,922	-				-1.3
2,993,922	-				-0.9
2,993,925	-				-1.6
2,993,925	-				-2.3
2,993,939	+				-2.9
2,993,939	+				-3.1
2,993,939	+				-3.0
2,993,939	+				-3.0
2,993,940	-				-4.1
2,993,940	-				-4.2
2,993,940	-				-2.1
2,993,940	-				-3.2
2,993,940	-				-0.9
2,993,940	-				-3.0
2,993,940	-				-1.6
2,993,950	+				-2.6
2,994,025	+		DZA65_RS13940	0.16	-3.5
2,994,025	+		DZA65_RS13940	0.16	-2.9
2,994,026	-		DZA65_RS13940	0.16	-2.8
2,994,078	+				-0.9
2,994,078	+		DZA65_RS13940	0.28	-3.2
2,994,078	+		DZA65_RS13940	0.28	-0.3
2,994,079	-		DZA65_RS13940	0.29	-2.3
2,994,079	-		DZA65_RS13940	0.29	-2.8
2,994,079	-		DZA65_RS13940	0.29	-4.2
2,994,079	-		DZA65_RS13940	0.29	-2.8
2,994,079	-		DZA65_RS13940	0.29	-1.6
2,994,079	-		DZA65_RS13940	0.29	+0.7
2,994,081	+		DZA65_RS13940	0.29	-1.6
2,994,082	-		DZA65_RS13940	0.29	-2.5
2,994,082	-		DZA65_RS13940	0.29	+0.7
2,994,117	+		DZA65_RS13940	0.38	-3.8
2,994,145	+		DZA65_RS13940	0.44	-1.6
2,994,145	+		DZA65_RS13940	0.44	-1.0
2,994,145	+		DZA65_RS13940	0.44	-2.1
2,994,146	-		DZA65_RS13940	0.45	-1.9
2,994,194	-		DZA65_RS13940	0.56	-2.7
2,994,217	+		DZA65_RS13940	0.62	-3.0
2,994,217	+		DZA65_RS13940	0.62	-3.6
2,994,217	+		DZA65_RS13940	0.62	-1.6
2,994,217	+		DZA65_RS13940	0.62	-2.6
2,994,218	-		DZA65_RS13940	0.62	-2.3
2,994,218	-		DZA65_RS13940	0.62	-3.9
2,994,228	+		DZA65_RS13940	0.64	-3.2
2,994,228	+		DZA65_RS13940	0.64	-4.2
2,994,228	+		DZA65_RS13940	0.64	-2.9
2,994,228	+		DZA65_RS13940	0.64	-4.1
2,994,228	+		DZA65_RS13940	0.64	-3.8
2,994,228	+		DZA65_RS13940	0.64	-3.9
2,994,228	+		DZA65_RS13940	0.64	-2.1
2,994,228	+		DZA65_RS13940	0.64	-2.3
2,994,228	+		DZA65_RS13940	0.64	-3.4
2,994,228	+		DZA65_RS13940	0.64	-3.6
2,994,228	+		DZA65_RS13940	0.64	-2.3
2,994,228	+		DZA65_RS13940	0.64	-2.1
2,994,229	-		DZA65_RS13940	0.65	-3.5
2,994,229	-		DZA65_RS13940	0.65	-2.6
2,994,229	-		DZA65_RS13940	0.65	-3.4
2,994,229	-		DZA65_RS13940	0.65	-2.3
2,994,229	-		DZA65_RS13940	0.65	-2.6
2,994,229	-		DZA65_RS13940	0.65	-0.3
2,994,232	-		DZA65_RS13940	0.65	+0.7
2,994,232	-		DZA65_RS13940	0.65	-1.3
2,994,266	-		DZA65_RS13940	0.73	-1.8
2,994,266	-		DZA65_RS13940	0.73	-1.6
2,994,297	+		DZA65_RS13940	0.81	-2.3
2,994,378	+				-1.6
2,994,379	-				-1.6
2,994,422	+				-1.6
2,994,422	+				-3.9
2,994,422	+				-4.2
2,994,422	+				-1.3
2,994,422	+				-3.4
2,994,423	-				-0.3
2,994,423	-				-1.9
2,994,423	-				-3.0
2,994,423	-				-3.0
2,994,441	+				-1.6
2,994,441	+				+0.7
2,994,441	+				-2.0
2,994,442	-				-1.9
2,994,442	-				-0.9
2,994,442	-				-1.3
2,994,442	-				-2.5
2,994,442	-				-1.3
2,994,489	+		DZA65_RS13945	0.15	-2.7
2,994,490	-		DZA65_RS13945	0.15	-2.1
2,994,571	-		DZA65_RS13945	0.25	-0.9
2,994,581	+		DZA65_RS13945	0.27	-1.3
2,994,581	+		DZA65_RS13945	0.27	-2.9
2,994,581	+		DZA65_RS13945	0.27	-2.3
2,994,582	-		DZA65_RS13945	0.27	-2.2
2,994,603	+		DZA65_RS13945	0.30	-4.1
2,994,609	+		DZA65_RS13945	0.30	-1.9
2,994,644	+		DZA65_RS13945	0.35	-3.4
2,994,644	+		DZA65_RS13945	0.35	-2.4
2,994,645	-		DZA65_RS13945	0.35	-2.1
2,994,687	+		DZA65_RS13945	0.40	-2.7
2,994,687	+		DZA65_RS13945	0.40	-0.1
2,994,687	+		DZA65_RS13945	0.40	-2.1
2,994,687	+		DZA65_RS13945	0.40	-1.3
2,994,687	+		DZA65_RS13945	0.40	-3.0
2,994,687	+		DZA65_RS13945	0.40	-4.3
2,994,688	-		DZA65_RS13945	0.41	-3.4
2,994,732	+		DZA65_RS13945	0.46	-1.9
2,994,732	+		DZA65_RS13945	0.46	-1.9
2,994,732	+		DZA65_RS13945	0.46	-1.3
2,994,733	-		DZA65_RS13945	0.46	-1.7
2,994,733	-		DZA65_RS13945	0.46	-0.3
2,994,736	+		DZA65_RS13945	0.47	-4.7
2,994,736	+		DZA65_RS13945	0.47	-3.0
2,994,736	+		DZA65_RS13945	0.47	-1.9
2,994,736	+		DZA65_RS13945	0.47	-2.9
2,994,737	-		DZA65_RS13945	0.47	-3.0
2,994,737	-		DZA65_RS13945	0.47	-3.7
2,994,737	-		DZA65_RS13945	0.47	+0.7
2,994,737	-		DZA65_RS13945	0.47	-0.1
2,994,737	-		DZA65_RS13945	0.47	-3.0
2,994,737	-		DZA65_RS13945	0.47	+0.1
2,994,768	+		DZA65_RS13945	0.51	-2.5
2,994,768	+		DZA65_RS13945	0.51	-4.4
2,994,851	+		DZA65_RS13945	0.62	-2.1
2,994,851	+		DZA65_RS13945	0.62	+0.1
2,994,852	-		DZA65_RS13945	0.62	-2.5
2,994,852	-		DZA65_RS13945	0.62	-2.1
2,994,852	-		DZA65_RS13945	0.62	-2.0
2,994,852	-		DZA65_RS13945	0.62	-4.9
2,994,852	-		DZA65_RS13945	0.62	-1.7
2,994,857	+		DZA65_RS13945	0.62	-0.3
2,994,857	+		DZA65_RS13945	0.62	+0.7
2,994,857	+		DZA65_RS13945	0.62	-3.9
2,994,857	+		DZA65_RS13945	0.62	-2.1
2,994,857	+		DZA65_RS13945	0.62	-3.8
2,994,858	-		DZA65_RS13945	0.62	-3.4
2,994,858	-		DZA65_RS13945	0.62	-3.0
2,994,858	-		DZA65_RS13945	0.62	-2.5
2,994,858	-		DZA65_RS13945	0.62	-0.3
2,994,858	-		DZA65_RS13945	0.62	-2.1
2,994,858	-		DZA65_RS13945	0.62	-3.3
2,994,917	+		DZA65_RS13945	0.70	-4.0
2,994,917	+		DZA65_RS13945	0.70	-2.8
2,994,918	-		DZA65_RS13945	0.70	-3.5
2,994,918	-		DZA65_RS13945	0.70	-1.8
2,994,918	-		DZA65_RS13945	0.70	-0.9
2,994,918	-		DZA65_RS13945	0.70	-0.3
2,994,923	+		DZA65_RS13945	0.71	-3.7
2,994,924	-		DZA65_RS13945	0.71	-2.7
2,994,931	+		DZA65_RS13945	0.72	-0.9
2,994,931	+		DZA65_RS13945	0.72	-2.9
2,994,931	+		DZA65_RS13945	0.72	-1.3
2,994,931	+		DZA65_RS13945	0.72	-1.4
2,994,931	+		DZA65_RS13945	0.72	-3.0
2,994,931	+		DZA65_RS13945	0.72	-1.7
2,994,931	+		DZA65_RS13945	0.72	-2.1
2,994,931	+		DZA65_RS13945	0.72	-1.3
2,994,931	+		DZA65_RS13945	0.72	-3.7
2,994,931	+		DZA65_RS13945	0.72	+2.4
2,994,931	+		DZA65_RS13945	0.72	-3.5
2,994,931	+		DZA65_RS13945	0.72	-2.8
2,994,931	+		DZA65_RS13945	0.72	-2.7
2,994,931	+		DZA65_RS13945	0.72	-4.3
2,994,931	+		DZA65_RS13945	0.72	-3.7
2,994,931	+		DZA65_RS13945	0.72	-2.1
2,994,931	+		DZA65_RS13945	0.72	-0.3
2,994,931	+		DZA65_RS13945	0.72	-1.7
2,994,931	+		DZA65_RS13945	0.72	-2.4
2,994,931	+		DZA65_RS13945	0.72	-3.1
2,994,931	+		DZA65_RS13945	0.72	-3.9
2,994,932	-		DZA65_RS13945	0.72	-1.7
2,994,932	-		DZA65_RS13945	0.72	-0.1
2,994,932	-		DZA65_RS13945	0.72	-1.9
2,994,932	-		DZA65_RS13945	0.72	-3.1
2,994,932	-		DZA65_RS13945	0.72	-2.3
2,994,932	-		DZA65_RS13945	0.72	-2.1
2,994,932	-		DZA65_RS13945	0.72	-2.8
2,994,932	-		DZA65_RS13945	0.72	-4.1
2,994,932	-		DZA65_RS13945	0.72	-2.9
2,994,932	-		DZA65_RS13945	0.72	-4.1