Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13890

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
2,983,675	-				-0.9
2,983,707	+				+0.1
2,983,707	+				+0.5
2,983,707	+				-0.3
2,983,707	+				-2.1
2,983,708	-				-0.3
2,983,708	-				-0.9
2,983,708	-				-1.3
2,983,708	-				-2.5
2,983,710	-				-0.3
2,983,732	-				-1.9
2,983,791	-		DZA65_RS13880	0.21	-1.9
2,983,791	-		DZA65_RS13880	0.21	-2.3
2,983,821	-		DZA65_RS13880	0.28	-3.4
2,983,854	-		DZA65_RS13880	0.36	-0.3
2,983,854	-		DZA65_RS13880	0.36	-1.6
2,983,892	+		DZA65_RS13880	0.46	-0.3
2,983,892	+		DZA65_RS13880	0.46	-1.9
2,983,895	+		DZA65_RS13880	0.46	-1.3
2,983,902	-		DZA65_RS13880	0.48	-2.3
2,983,968	+		DZA65_RS13880	0.64	-2.8
2,983,975	-		DZA65_RS13880	0.66	-1.6
2,983,975	-		DZA65_RS13880	0.66	-3.8
2,983,975	-		DZA65_RS13880	0.66	-2.1
2,984,006	+		DZA65_RS13880	0.73	-1.3
2,984,029	+		DZA65_RS13880	0.79	-0.9
2,984,029	+		DZA65_RS13880	0.79	-1.6
2,984,030	-		DZA65_RS13880	0.79	-3.5
2,984,030	-		DZA65_RS13880	0.79	-1.9
2,984,030	-		DZA65_RS13880	0.79	-1.5
2,984,054	+		DZA65_RS13880	0.85	-1.3
2,984,055	-		DZA65_RS13880	0.85	-1.9
2,984,055	-		DZA65_RS13880	0.85	-0.3
2,984,113	-				-1.9
2,984,134	-				-0.9
2,984,137	+				-0.5
2,984,137	+				-0.6
2,984,138	-				-2.8
2,984,174	-		DZA65_RS13885	0.17	-0.3
2,984,226	+		DZA65_RS13885	0.31	-2.9
2,984,226	+		DZA65_RS13885	0.31	-3.2
2,984,226	+		DZA65_RS13885	0.31	-1.2
2,984,226	+		DZA65_RS13885	0.31	-1.9
2,984,227	-		DZA65_RS13885	0.31	-2.1
2,984,231	+		DZA65_RS13885	0.32	-1.1
2,984,231	+		DZA65_RS13885	0.32	-1.4
2,984,231	+		DZA65_RS13885	0.32	-2.9
2,984,231	+		DZA65_RS13885	0.32	-0.6
2,984,231	+		DZA65_RS13885	0.32	-1.3
2,984,232	-		DZA65_RS13885	0.33	-2.5
2,984,232	-		DZA65_RS13885	0.33	-1.3
2,984,299	-		DZA65_RS13885	0.51	+0.7
2,984,325	+		DZA65_RS13885	0.58	-1.9
2,984,325	+		DZA65_RS13885	0.58	-1.3
2,984,325	+		DZA65_RS13885	0.58	-3.4
2,984,325	+		DZA65_RS13885	0.58	-1.9
2,984,326	-		DZA65_RS13885	0.58	-1.6
2,984,326	-		DZA65_RS13885	0.58	+0.6
2,984,326	-		DZA65_RS13885	0.58	-0.9
2,984,326	-		DZA65_RS13885	0.58	-1.5
2,984,429	+		DZA65_RS13885	0.87	-2.3
2,984,429	+		DZA65_RS13885	0.87	-3.2
2,984,429	+		DZA65_RS13885	0.87	+0.1
2,984,429	+		DZA65_RS13885	0.87	-1.6
2,984,429	+		DZA65_RS13885	0.87	-3.0
2,984,430	-		DZA65_RS13885	0.87	-1.5
2,984,430	-		DZA65_RS13885	0.87	-1.6
2,984,430	-		DZA65_RS13885	0.87	-3.4
2,984,430	-		DZA65_RS13885	0.87	-1.3
2,984,430	-		DZA65_RS13885	0.87	-1.6
2,984,430	-		DZA65_RS13885	0.87	-1.8
2,984,430	-		DZA65_RS13885	0.87	-2.1
2,984,449	+				-0.8
2,984,450	-				-2.3
2,984,450	-				+0.7
2,984,451	+				-1.5
2,984,451	+				+0.5
2,984,452	-				-2.4
2,984,452	-				-1.6
2,984,452	-				-1.3
2,984,452	-				-2.8
2,984,494	+				-1.3
2,984,494	+				+0.9
2,984,495	-				+1.5
2,984,539	+				-0.0
2,984,539	+				+1.9
2,984,539	+				+0.1
2,984,539	+				+0.7
2,984,539	+				-2.5
2,984,539	+				-1.0
2,984,539	+				-0.3
2,984,539	+				-1.3
2,984,539	+				+0.7
2,984,539	+				+0.9
2,984,539	+				+1.2
2,984,539	+				-0.4
2,984,539	+				+0.9
2,984,539	+				+0.2
2,984,539	+				-0.6
2,984,540	-				+0.7
2,984,540	-				+0.8
2,984,540	-				+0.0
2,984,540	-				-0.1
2,984,540	-				+0.7
2,984,540	-				-0.8
2,984,541	+				-2.1
2,984,541	+				+2.3
2,984,541	+				-0.6
2,984,541	+				+1.7
2,984,541	+				-0.1
2,984,541	+				+0.8
2,984,541	+				-0.9
2,984,541	+				+0.1
2,984,542	-				-1.6
2,984,542	-				-0.7
2,984,542	-				-1.3
2,984,542	-				+0.1
2,984,542	-				-0.2
2,984,542	-				-0.9
2,984,542	-				-1.3
2,984,542	-				+0.4
2,984,542	-				-1.3
2,984,542	-				-2.5
2,984,542	-				+2.6
2,984,542	-				-0.9
2,984,542	-				+2.0
2,984,542	-				-1.1
2,984,542	-				-0.1
2,984,542	-				-0.5
2,984,542	-				-1.3
2,984,542	-				-1.2
2,984,542	-				+1.1
2,984,543	+				-0.1
2,984,543	+				-2.4
2,984,543	+				-0.5
2,984,543	+				-0.1
2,984,543	+				+0.3
2,984,543	+				-2.1
2,984,543	+				-0.3
2,984,543	+				+0.2
2,984,544	-				+0.3
2,984,544	-				-1.1
2,984,544	-				+1.7
2,984,544	-				-0.4
2,984,544	-				+1.0
2,984,544	-				+0.5
2,984,544	-				+0.9
2,984,544	-				+0.8
2,984,544	-				+0.2
2,984,544	-				+1.1
2,984,544	-				-1.1
2,984,544	-				+1.7
2,984,544	-				-1.6
2,984,544	-				-0.5
2,984,544	-				-0.5
2,984,544	-				-0.3
2,984,575	-				+2.3
2,984,605	+				+3.5
2,984,605	+				+0.5
2,984,606	-				+1.2
2,984,616	+				-1.0
2,984,616	+				-0.5
2,984,617	-				+0.5
2,984,617	-				+1.0
2,984,668	+				-1.3
2,984,668	+				-0.3
2,984,668	+				+0.9
2,984,668	+				-1.3
2,984,668	+				+1.0
2,984,668	+				-1.3
2,984,668	+				+1.1
2,984,669	-				+2.0
2,984,670	+				-2.3
2,984,670	+				+1.5
2,984,670	+				-2.0
2,984,670	+				-1.6
2,984,671	-				-1.6
2,984,671	-				-3.7
2,984,678	+				-3.5
2,984,678	+				-4.4
2,984,678	+				-1.6
2,984,678	+				-2.9
2,984,679	-				-2.1
2,984,679	-				-1.3
2,984,679	-				-1.9
2,984,679	-				-4.0
2,984,711	+		DZA65_RS13890	0.14	-2.8
2,984,711	+		DZA65_RS13890	0.14	+0.7
2,984,711	+		DZA65_RS13890	0.14	-3.7
2,984,711	+		DZA65_RS13890	0.14	-3.2
2,984,744	+		DZA65_RS13890	0.24	-3.6
2,984,744	+		DZA65_RS13890	0.24	-2.6
2,984,744	+		DZA65_RS13890	0.24	-1.0
2,984,744	+		DZA65_RS13890	0.24	-2.6
2,984,744	+		DZA65_RS13890	0.24	-2.1
2,984,744	+		DZA65_RS13890	0.24	-1.6
2,984,804	+		DZA65_RS13890	0.43	-3.0
2,984,804	+		DZA65_RS13890	0.43	-2.9
2,984,804	+		DZA65_RS13890	0.43	-3.1
2,984,804	+		DZA65_RS13890	0.43	-3.6
2,984,805	-		DZA65_RS13890	0.44	-1.3
2,984,805	-		DZA65_RS13890	0.44	-1.2
2,984,805	-		DZA65_RS13890	0.44	-2.9
2,984,805	-		DZA65_RS13890	0.44	-3.7
2,984,956	-				-2.3
2,984,975	+				-2.1
2,984,975	+				-1.6
2,984,976	-				-0.2
2,984,976	-				-2.8
2,984,976	-				-1.5
2,985,027	-				-0.8
2,985,034	-				-1.9
2,985,039	+				-3.5
2,985,039	+				-2.0
2,985,039	+				-2.3
2,985,039	+				-2.3
2,985,039	+				-0.9
2,985,039	+				-3.1
2,985,040	-				-1.6
2,985,043	+				-1.2
2,985,043	+				-0.6
2,985,043	+				-1.9
2,985,043	+				-2.7
2,985,043	+				-2.3
2,985,043	+				-2.9
2,985,044	-				+0.1
2,985,079	+				-1.6
2,985,088	+				-2.6
2,985,088	+				-1.3
2,985,088	+				-1.1
2,985,088	+				-2.3
2,985,088	+				-0.3
2,985,088	+				-1.9
2,985,088	+				-2.5
2,985,088	+				-1.9
2,985,088	+				-3.3
2,985,089	-				+0.1
2,985,089	-				-2.8
2,985,089	-				-0.3
2,985,089	-				-0.1
2,985,089	-				-1.2
2,985,089	-				+1.3
2,985,089	-				+1.2
2,985,089	-				+1.2
2,985,131	-				-0.9
2,985,133	+				-0.3
2,985,133	+				-1.6
2,985,133	+				-3.6
2,985,133	+				-2.8
2,985,133	+				-1.8
2,985,141	-				-3.1
2,985,143	-				-1.8
2,985,153	-				-2.5
2,985,153	-				-2.3
2,985,198	+				-0.3
2,985,199	-				-2.0
2,985,199	-				-2.8
2,985,212	+				-0.6
2,985,218	+				-1.3
2,985,266	-				-1.9
2,985,266	-				-1.2
2,985,266	-				-2.6
2,985,266	-				-2.9
2,985,270	+				-1.9
2,985,270	+				-2.1
2,985,270	+				-3.3
2,985,270	+				-3.8
2,985,270	+				-3.8
2,985,308	+				-4.3
2,985,308	+				-2.5
2,985,308	+				-3.0
2,985,309	-				-2.3
2,985,309	-				-0.9
2,985,309	-				-4.0
2,985,309	-				-2.3
2,985,309	-				-2.6
2,985,309	-				-1.6
2,985,309	-				-1.8
2,985,309	-				-2.1
2,985,313	+				-1.4
2,985,313	+				+0.3
2,985,313	+				-0.9
2,985,313	+				-4.2
2,985,313	+				-2.1
2,985,313	+				-2.1
2,985,313	+				-2.5
2,985,314	-				-0.9
2,985,314	-				-3.4
2,985,314	-				-2.8
2,985,324	+				-1.3
2,985,324	+				-1.4
2,985,324	+				-4.2
2,985,325	-				-1.8
2,985,325	-				-1.6
2,985,366	+				-1.6
2,985,367	-				-2.1
2,985,367	-				-4.1
2,985,367	-				-3.4
2,985,391	+				+0.5
2,985,391	+				-0.3
2,985,391	+				-3.0
2,985,392	-				+0.2
2,985,392	-				-0.9
2,985,403	-				-4.9
2,985,424	+				-3.7
2,985,424	+				-3.8
2,985,424	+				-3.6
2,985,425	-				-1.1
2,985,425	-				-1.1
2,985,425	-				-0.9
2,985,437	-				-3.9
2,985,482	+				-2.5
2,985,482	+				-0.3
2,985,482	+				+0.1
2,985,482	+				-4.1
2,985,482	+				-4.7
2,985,482	+				-4.1
2,985,482	+				-2.5
2,985,483	-				-0.3
2,985,483	-				-4.1
2,985,483	-				-3.4
2,985,483	-				-1.9
2,985,483	-				-3.4
2,985,483	-				-2.1
2,985,483	-				-2.4
2,985,483	-				-4.0
2,985,490	+		DZA65_RS13895	0.10	-3.0
2,985,490	+		DZA65_RS13895	0.10	-2.1
2,985,491	-		DZA65_RS13895	0.10	-1.1
2,985,491	-		DZA65_RS13895	0.10	-3.2
2,985,511	+		DZA65_RS13895	0.11	+0.7
2,985,512	-				-1.3
2,985,514	+		DZA65_RS13895	0.12	-2.4
2,985,514	+		DZA65_RS13895	0.12	-2.6
2,985,514	+		DZA65_RS13895	0.12	-4.3
2,985,514	+		DZA65_RS13895	0.12	-1.9
2,985,514	+		DZA65_RS13895	0.12	-3.8
2,985,514	+		DZA65_RS13895	0.12	-2.8
2,985,514	+		DZA65_RS13895	0.12	-3.7
2,985,514	+		DZA65_RS13895	0.12	+1.5
2,985,515	-		DZA65_RS13895	0.12	-3.9
2,985,515	-		DZA65_RS13895	0.12	-3.8
2,985,515	-		DZA65_RS13895	0.12	-2.6
2,985,515	-		DZA65_RS13895	0.12	-1.9
2,985,515	-		DZA65_RS13895	0.12	-3.2
2,985,515	-		DZA65_RS13895	0.12	-3.1
2,985,515	-		DZA65_RS13895	0.12	-2.9
2,985,515	-		DZA65_RS13895	0.12	-1.6
2,985,515	-		DZA65_RS13895	0.12	-2.3
2,985,515	-		DZA65_RS13895	0.12	-2.3
2,985,600	-		DZA65_RS13895	0.17	-1.9
2,985,600	-		DZA65_RS13895	0.17	-2.1
2,985,713	+		DZA65_RS13895	0.23	-1.9
2,985,713	+		DZA65_RS13895	0.23	-0.3
2,985,713	+		DZA65_RS13895	0.23	-1.9
2,985,713	+		DZA65_RS13895	0.23	-1.7
2,985,713	+		DZA65_RS13895	0.23	-4.3
2,985,713	+		DZA65_RS13895	0.23	-4.0
2,985,713	+		DZA65_RS13895	0.23	+0.7
2,985,713	+		DZA65_RS13895	0.23	-1.6
2,985,714	-		DZA65_RS13895	0.23	-3.9
2,985,714	-		DZA65_RS13895	0.23	-1.1
2,985,714	-		DZA65_RS13895	0.23	-1.3
2,985,714	-		DZA65_RS13895	0.23	-4.4
2,985,714	-		DZA65_RS13895	0.23	-0.6
2,985,738	+		DZA65_RS13895	0.25	-4.0
2,985,739	-		DZA65_RS13895	0.25	-2.3
2,985,772	+		DZA65_RS13895	0.27	-1.6
2,985,772	+		DZA65_RS13895	0.27	-2.8
2,985,773	-		DZA65_RS13895	0.27	-3.4
2,985,783	+		DZA65_RS13895	0.27	-0.1
2,985,783	+		DZA65_RS13895	0.27	-1.3
2,985,783	+		DZA65_RS13895	0.27	-1.6
2,985,783	+		DZA65_RS13895	0.27	-2.8
2,985,783	+		DZA65_RS13895	0.27	-4.3
2,985,784	-		DZA65_RS13895	0.27	-3.4
2,985,784	-		DZA65_RS13895	0.27	-1.3
2,985,784	-		DZA65_RS13895	0.27	-2.5
2,985,784	-		DZA65_RS13895	0.27	-2.5
2,985,784	-		DZA65_RS13895	0.27	-2.8
2,985,784	-		DZA65_RS13895	0.27	-3.6
2,985,789	+		DZA65_RS13895	0.28	-3.6
2,985,789	+		DZA65_RS13895	0.28	-2.9
2,985,789	+		DZA65_RS13895	0.28	-4.5
2,985,790	-		DZA65_RS13895	0.28	-1.3
2,985,790	-		DZA65_RS13895	0.28	-0.9
2,985,901	+		DZA65_RS13895	0.34	-3.4
2,985,901	+		DZA65_RS13895	0.34	-0.6
2,985,901	+		DZA65_RS13895	0.34	-1.9
2,985,901	+		DZA65_RS13895	0.34	-4.1
2,985,901	+		DZA65_RS13895	0.34	-2.5
2,985,901	+		DZA65_RS13895	0.34	-1.8
2,985,901	+		DZA65_RS13895	0.34	-3.1
2,985,902	-		DZA65_RS13895	0.34	-4.0
2,985,902	-		DZA65_RS13895	0.34	-3.4
2,985,905	+		DZA65_RS13895	0.34	-2.5
2,985,905	+		DZA65_RS13895	0.34	-1.6
2,985,905	+		DZA65_RS13895	0.34	-4.5
2,985,905	+		DZA65_RS13895	0.34	+0.7
2,985,905	+		DZA65_RS13895	0.34	-1.6
2,985,905	+		DZA65_RS13895	0.34	-3.6
2,985,906	-		DZA65_RS13895	0.34	-0.5
2,985,906	-		DZA65_RS13895	0.34	-1.3
2,985,949	+		DZA65_RS13895	0.37	-2.3
2,985,971	-		DZA65_RS13895	0.38	-2.5