Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07275

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
1,512,196	+				-0.3
1,512,196	+				+0.4
1,512,196	+				+0.7
1,512,196	+				+1.0
1,512,197	-				+0.5
1,512,197	-				-3.1
1,512,197	-				+0.8
1,512,197	-				-0.9
1,512,197	-				+2.3
1,512,197	-				-0.6
1,512,197	-				-2.2
1,512,202	+				+1.7
1,512,202	+				+1.0
1,512,202	+				+1.4
1,512,202	+				-1.9
1,512,203	-				+0.7
1,512,203	-				+1.3
1,512,220	-				+0.9
1,512,408	+				-1.3
1,512,408	+				+0.3
1,512,408	+				-0.1
1,512,408	+				+1.5
1,512,409	-				+0.7
1,512,409	-				-0.6
1,512,409	-				+0.2
1,512,409	-				-0.3
1,512,409	-				-0.3
1,512,409	-				-1.3
1,512,420	+				-0.3
1,512,421	-				-0.6
1,512,457	-				-1.6
1,512,523	+		DZA65_RS07270	0.10	-1.6
1,512,686	-		DZA65_RS07270	0.34	+1.1
1,512,727	+		DZA65_RS07270	0.39	+0.7
1,512,728	-		DZA65_RS07270	0.40	-0.6
1,512,765	+		DZA65_RS07270	0.45	+1.4
1,512,933	+		DZA65_RS07270	0.69	-0.7
1,512,944	+		DZA65_RS07270	0.71	+0.3
1,512,945	-		DZA65_RS07270	0.71	-1.3
1,512,945	-		DZA65_RS07270	0.71	+1.4
1,513,000	+		DZA65_RS07270	0.79	-0.7
1,513,000	+		DZA65_RS07270	0.79	-0.1
1,513,000	+		DZA65_RS07270	0.79	-1.5
1,513,000	+		DZA65_RS07270	0.79	-0.5
1,513,000	+		DZA65_RS07270	0.79	-2.5
1,513,000	+		DZA65_RS07270	0.79	-0.2
1,513,000	+		DZA65_RS07270	0.79	-2.5
1,513,000	+		DZA65_RS07270	0.79	+0.0
1,513,000	+		DZA65_RS07270	0.79	+2.0
1,513,000	+		DZA65_RS07270	0.79	-0.3
1,513,000	+		DZA65_RS07270	0.79	+1.0
1,513,000	+		DZA65_RS07270	0.79	-1.6
1,513,000	+		DZA65_RS07270	0.79	-1.9
1,513,000	+		DZA65_RS07270	0.79	+0.4
1,513,001	-		DZA65_RS07270	0.79	-0.2
1,513,001	-		DZA65_RS07270	0.79	-0.9
1,513,001	-		DZA65_RS07270	0.79	-1.3
1,513,001	-		DZA65_RS07270	0.79	-0.9
1,513,001	-		DZA65_RS07270	0.79	+0.1
1,513,001	-		DZA65_RS07270	0.79	+0.7
1,513,001	-		DZA65_RS07270	0.79	-1.5
1,513,001	-		DZA65_RS07270	0.79	+1.7
1,513,001	-		DZA65_RS07270	0.79	+0.6
1,513,001	-		DZA65_RS07270	0.79	-1.0
1,513,001	-		DZA65_RS07270	0.79	+0.1
1,513,001	-		DZA65_RS07270	0.79	-1.0
1,513,001	-		DZA65_RS07270	0.79	-1.6
1,513,001	-		DZA65_RS07270	0.79	+1.1
1,513,001	-		DZA65_RS07270	0.79	+1.7
1,513,001	-		DZA65_RS07270	0.79	-2.1
1,513,002	+		DZA65_RS07270	0.79	+0.2
1,513,002	+		DZA65_RS07270	0.79	-0.3
1,513,003	-		DZA65_RS07270	0.79	-1.1
1,513,054	+		DZA65_RS07270	0.86	+0.7
1,513,054	+		DZA65_RS07270	0.86	+0.7
1,513,054	+		DZA65_RS07270	0.86	+1.2
1,513,055	-		DZA65_RS07270	0.86	+1.9
1,513,055	-		DZA65_RS07270	0.86	-0.6
1,513,077	+		DZA65_RS07270	0.90	+0.9
1,513,078	-		DZA65_RS07270	0.90	-0.1
1,513,133	+				+0.9
1,513,143	+				+1.1
1,513,143	+				+2.7
1,513,143	+				-0.0
1,513,143	+				+1.1
1,513,143	+				-0.1
1,513,143	+				-0.6
1,513,143	+				+1.9
1,513,143	+				+2.1
1,513,143	+				+0.8
1,513,144	-				+0.3
1,513,144	-				+0.4
1,513,144	-				-0.9
1,513,144	-				-0.5
1,513,144	-				-0.5
1,513,144	-				+2.7
1,513,144	-				-2.8
1,513,144	-				-0.3
1,513,144	-				+2.0
1,513,144	-				-2.1
1,513,158	+				-0.2
1,513,158	+				+0.4
1,513,158	+				+0.1
1,513,158	+				+1.1
1,513,159	-				-2.8
1,513,159	-				+0.7
1,513,159	-				-1.6
1,513,159	-				-0.9
1,513,159	-				+0.5
1,513,159	-				-1.3
1,513,159	-				-1.3
1,513,159	-				-0.0
1,513,159	-				+0.7
1,513,159	-				-0.6
1,513,159	-				-2.8
1,513,159	-				-1.8
1,513,377	+		DZA65_RS07275	0.26	-1.9
1,513,377	+		DZA65_RS07275	0.26	-1.1
1,513,378	-		DZA65_RS07275	0.26	-0.5
1,513,378	-		DZA65_RS07275	0.26	+0.7
1,513,378	-				-1.6
1,513,476	-		DZA65_RS07275	0.37	+1.7
1,513,476	-		DZA65_RS07275	0.37	-0.3
1,513,490	+		DZA65_RS07275	0.38	+0.2
1,513,536	+		DZA65_RS07275	0.43	+0.2
1,513,560	+		DZA65_RS07275	0.46	+0.2
1,513,560	+		DZA65_RS07275	0.46	+1.2
1,513,560	+		DZA65_RS07275	0.46	+0.9
1,513,561	-		DZA65_RS07275	0.46	+0.3
1,513,561	-		DZA65_RS07275	0.46	-1.1
1,513,672	+		DZA65_RS07275	0.59	+0.2
1,513,878	+		DZA65_RS07275	0.82	-0.3
1,513,878	+		DZA65_RS07275	0.82	+1.9
1,513,951	+		DZA65_RS07275	0.90	+0.3
1,513,951	+		DZA65_RS07275	0.90	+1.4
1,513,951	+		DZA65_RS07275	0.90	+0.7
1,513,951	+		DZA65_RS07275	0.90	+2.0
1,513,952	-		DZA65_RS07275	0.90	+1.4
1,513,952	-		DZA65_RS07275	0.90	+0.5
1,513,952	-		DZA65_RS07275	0.90	+0.7
1,513,981	+				+1.4
1,513,981	+				+1.1
1,513,981	+				+2.3
1,513,981	+				-0.6
1,513,981	+				+0.3
1,513,981	+				+1.7
1,513,982	-				+3.9
1,513,982	-				-0.9
1,513,982	-				+0.1
1,513,982	-				-2.2
1,513,982	-				+0.4
1,513,982	-				-1.1
1,513,982	-				+0.7
1,514,011	+				+0.7
1,514,012	-				+0.8
1,514,012	-				-1.3
1,514,037	+				-0.3
1,514,038	-				+1.8
1,514,038	-				-1.3
1,514,040	+				-0.9
1,514,040	+				+0.7
1,514,040	+				+1.7
1,514,040	+				+0.8
1,514,040	+				+2.3
1,514,041	-				+0.0
1,514,041	-				+0.3
1,514,041	-				-0.6
1,514,041	-				-3.0
1,514,041	-				-1.3
1,514,041	-				+3.0
1,514,041	-				+1.4
1,514,169	+		DZA65_RS07280	0.23	+0.7
1,514,169	+		DZA65_RS07280	0.23	-0.7
1,514,221	-		DZA65_RS07280	0.32	+0.4
1,514,228	+		DZA65_RS07280	0.33	-0.9
1,514,229	-		DZA65_RS07280	0.33	-2.3
1,514,239	+		DZA65_RS07280	0.34	-0.5
1,514,239	+		DZA65_RS07280	0.34	+1.3
1,514,253	-		DZA65_RS07280	0.37	+1.5
1,514,253	-		DZA65_RS07280	0.37	+0.3
1,514,274	-		DZA65_RS07280	0.40	-1.6
1,514,274	-		DZA65_RS07280	0.40	+1.7
1,514,434	+		DZA65_RS07280	0.66	+0.5
1,514,435	-		DZA65_RS07280	0.66	-0.5
1,514,435	-		DZA65_RS07280	0.66	-0.3
1,514,435	-		DZA65_RS07280	0.66	+1.3
1,514,435	-		DZA65_RS07280	0.66	-2.5
1,514,456	+		DZA65_RS07280	0.70	+0.2
1,514,518	+		DZA65_RS07280	0.80	-0.3
1,514,518	+		DZA65_RS07280	0.80	+0.3
1,514,519	-		DZA65_RS07280	0.80	+1.1
1,514,519	-		DZA65_RS07280	0.80	+0.5
1,514,519	-		DZA65_RS07280	0.80	-2.6
1,514,563	+		DZA65_RS07280	0.87	+1.7
1,514,623	+				+0.7
1,514,624	-				+1.7
1,514,624	-				-1.1
1,514,624	-				+0.1
1,514,624	-				-0.1
1,514,625	+				-1.9
1,514,664	+				-1.3
1,514,664	+				-0.8
1,514,790	+		DZA65_RS07285	0.13	+0.7
1,514,825	+		DZA65_RS07285	0.16	+1.7
1,514,826	-		DZA65_RS07285	0.16	-0.2
1,514,842	-		DZA65_RS07285	0.18	-0.1
1,514,947	-		DZA65_RS07285	0.27	-1.3
1,514,953	+		DZA65_RS07285	0.27	+1.5
1,514,954	-		DZA65_RS07285	0.27	+1.9
1,514,954	-		DZA65_RS07285	0.27	+1.0
1,514,975	+		DZA65_RS07285	0.29	+1.4
1,514,988	+		DZA65_RS07285	0.30	-1.5
1,514,988	+		DZA65_RS07285	0.30	+0.2
1,514,989	-		DZA65_RS07285	0.30	+1.1
1,514,989	-		DZA65_RS07285	0.30	+0.1