Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08210

Experiment: Stem-Upstate

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Upstate
1,717,978	+				-0.3
1,717,979	-				+2.4
1,717,984	+				-0.3
1,717,994	-				-1.0
1,717,994	-				-0.6
1,718,066	-		DZA65_RS08205	0.18	-0.6
1,718,102	+		DZA65_RS08205	0.23	+0.8
1,718,103	-		DZA65_RS08205	0.23	-0.6
1,718,164	+		DZA65_RS08205	0.30	-2.0
1,718,165	-		DZA65_RS08205	0.30	-0.2
1,718,214	+		DZA65_RS08205	0.36	-1.0
1,718,214	+		DZA65_RS08205	0.36	+2.0
1,718,214	+		DZA65_RS08205	0.36	-0.9
1,718,214	+		DZA65_RS08205	0.36	-1.4
1,718,214	+		DZA65_RS08205	0.36	-2.4
1,718,215	-		DZA65_RS08205	0.37	+0.1
1,718,215	-		DZA65_RS08205	0.37	-0.6
1,718,215	-		DZA65_RS08205	0.37	-0.2
1,718,215	-		DZA65_RS08205	0.37	+1.4
1,718,215	-		DZA65_RS08205	0.37	-1.0
1,718,215	-		DZA65_RS08205	0.37	+0.4
1,718,215	-		DZA65_RS08205	0.37	-1.9
1,718,236	-		DZA65_RS08205	0.39	+0.7
1,718,236	-		DZA65_RS08205	0.39	-2.7
1,718,236	-				-0.6
1,718,236	-		DZA65_RS08205	0.39	-1.4
1,718,245	+				+1.0
1,718,245	+		DZA65_RS08205	0.40	+0.4
1,718,245	+		DZA65_RS08205	0.40	+0.2
1,718,245	+		DZA65_RS08205	0.40	-0.4
1,718,246	-		DZA65_RS08205	0.40	-1.2
1,718,260	+		DZA65_RS08205	0.42	+0.4
1,718,260	+		DZA65_RS08205	0.42	-0.2
1,718,260	+		DZA65_RS08205	0.42	-1.8
1,718,261	-		DZA65_RS08205	0.42	-1.0
1,718,261	-		DZA65_RS08205	0.42	-0.6
1,718,261	-		DZA65_RS08205	0.42	-1.2
1,718,261	-		DZA65_RS08205	0.42	+0.7
1,718,261	-		DZA65_RS08205	0.42	+2.8
1,718,261	-		DZA65_RS08205	0.42	-2.5
1,718,278	+		DZA65_RS08205	0.44	-1.4
1,718,278	+		DZA65_RS08205	0.44	+0.8
1,718,278	+		DZA65_RS08205	0.44	+0.2
1,718,359	+		DZA65_RS08205	0.54	+1.3
1,718,442	-		DZA65_RS08205	0.65	-1.2
1,718,442	-		DZA65_RS08205	0.65	+1.1
1,718,442	-		DZA65_RS08205	0.65	+1.4
1,718,442	-		DZA65_RS08205	0.65	-1.2
1,718,470	+		DZA65_RS08205	0.68	+0.4
1,718,470	+		DZA65_RS08205	0.68	+0.4
1,718,470	+		DZA65_RS08205	0.68	+2.2
1,718,471	-		DZA65_RS08205	0.68	-2.0
1,718,473	+		DZA65_RS08205	0.69	-1.8
1,718,474	-		DZA65_RS08205	0.69	+3.4
1,718,474	-		DZA65_RS08205	0.69	+1.1
1,718,474	-		DZA65_RS08205	0.69	-1.0
1,718,474	-		DZA65_RS08205	0.69	+0.8
1,718,474	-		DZA65_RS08205	0.69	-0.4
1,718,474	-		DZA65_RS08205	0.69	+3.0
1,718,477	+		DZA65_RS08205	0.69	+0.1
1,718,477	+		DZA65_RS08205	0.69	-1.0
1,718,477	+		DZA65_RS08205	0.69	+1.4
1,718,477	+		DZA65_RS08205	0.69	-0.4
1,718,478	-		DZA65_RS08205	0.69	+0.7
1,718,478	-		DZA65_RS08205	0.69	+0.1
1,718,478	-		DZA65_RS08205	0.69	-0.2
1,718,495	+		DZA65_RS08205	0.71	+1.2
1,718,496	-		DZA65_RS08205	0.71	-1.4
1,718,561	+		DZA65_RS08205	0.79	-0.4
1,718,562	-		DZA65_RS08205	0.80	-1.2
1,718,562	-		DZA65_RS08205	0.80	+0.4
1,718,562	-		DZA65_RS08205	0.80	-0.6
1,718,574	-		DZA65_RS08205	0.81	-0.8
1,718,587	+		DZA65_RS08205	0.83	-1.6
1,718,587	+		DZA65_RS08205	0.83	+0.8
1,718,588	-		DZA65_RS08205	0.83	-1.2
1,718,588	-		DZA65_RS08205	0.83	+0.8
1,718,656	+				-1.6
1,718,656	+				-1.9
1,718,656	+				+0.4
1,718,681	+				-1.6
1,718,692	+				-1.0
1,718,692	+				-0.2
1,718,692	+				-1.8
1,718,708	+				+0.3
1,718,708	+				-0.6
1,718,708	+				-0.4
1,718,709	-				-1.1
1,718,709	-				+1.4
1,718,709	-				+1.2
1,718,730	+				-0.2
1,718,748	+				-0.6
1,718,749	-				+0.2
1,718,749	-				-1.2
1,718,749	-				-1.4
1,718,749	-				-0.2
1,718,749	-				-1.8
1,718,749	-				-0.4
1,718,749	-				-1.4
1,718,829	+				+0.4
1,718,829	+				-0.8
1,718,829	+				-0.6
1,718,829	+				+2.4
1,718,829	+				-0.6
1,718,829	+				-0.6
1,718,829	+				-0.6
1,718,829	+				+0.5
1,718,829	+				-0.1
1,718,829	+				-1.0
1,718,829	+				+0.5
1,718,829	+				-0.2
1,718,830	-				+0.7
1,718,830	-				+2.4
1,718,830	-				-0.3
1,718,830	-				-0.2
1,718,830	-				+2.0
1,718,830	-				-2.4
1,718,830	-				+0.8
1,718,830	-				-0.8
1,718,830	-				-0.4
1,718,830	-				-1.8
1,718,830	-				-0.2
1,718,830	-				-1.6
1,718,864	-				+1.4
1,718,901	-				+0.4
1,718,930	-				-1.4
1,718,930	-				-1.6
1,718,930	-				+0.3
1,718,930	-				-0.9
1,718,930	-				-1.9
1,718,962	+				+1.6
1,718,962	+				+2.0
1,718,962	+				-0.4
1,718,962	+				+1.6
1,718,963	-				-2.4
1,718,977	+				+1.2
1,718,977	+				-0.7
1,718,978	-				-0.2
1,718,978	-				-0.9
1,718,978	-				-0.7
1,719,063	-				-0.5
1,719,063	-				-1.2
1,719,063	-				+0.4
1,719,063	-				+0.8
1,719,096	-				-0.9
1,719,219	-				+1.2
1,719,242	+				+0.9
1,719,305	+				-0.3
1,719,305	+				+0.2
1,719,306	-				-2.6
1,719,306	-				+0.2
1,719,319	-				-0.2
1,719,319	-				-1.2
1,719,319	-				+0.4
1,719,320	+				+0.4
1,719,320	+				-0.2
1,719,320	+				+0.4
1,719,320	+				-0.8
1,719,444	+				-1.2
1,719,444	+				-2.3
1,719,444	+				-0.6
1,719,445	-				-0.2
1,719,445	-				-1.6
1,719,446	+				-0.6
1,719,446	+				+0.4
1,719,446	+				-1.6
1,719,447	-				-0.2
1,719,447	-				+0.2
1,719,447	-				-0.9
1,719,489	+				+0.6
1,719,490	-				+0.4
1,719,490	-				-0.9
1,719,490	-				-0.3
1,719,490	-				+1.1
1,719,490	-				-1.6
1,719,491	+				-0.6
1,719,491	+				+0.1
1,719,492	-				+1.0
1,719,492	-				+1.4
1,719,492	-				+0.4
1,719,492	-				+3.4
1,719,492	-				-0.2
1,719,538	+				+0.6
1,719,538	+				-0.9
1,719,538	+				+0.4
1,719,539	-				-2.2
1,719,539	-				+0.4
1,719,539	-				-0.2
1,719,704	+				-1.2
1,719,704	+				-1.4
1,719,705	-				+0.8
1,719,835	+		DZA65_RS08210	0.10	-1.3
1,719,835	+		DZA65_RS08210	0.10	-0.6
1,719,835	+		DZA65_RS08210	0.10	+1.4
1,719,846	-		DZA65_RS08210	0.10	-1.4
1,719,979	+		DZA65_RS08210	0.12	-0.2
1,719,980	-		DZA65_RS08210	0.12	-0.9
1,720,032	-		DZA65_RS08210	0.12	+0.2
1,720,032	-		DZA65_RS08210	0.12	+0.4
1,720,074	-		DZA65_RS08210	0.13	+1.4
1,720,121	+		DZA65_RS08210	0.13	-0.9
1,720,122	-		DZA65_RS08210	0.13	-1.9
1,720,151	+		DZA65_RS08210	0.14	+0.0
1,720,151	+		DZA65_RS08210	0.14	-1.4
1,720,151	+		DZA65_RS08210	0.14	-0.2
1,720,151	+		DZA65_RS08210	0.14	-0.6
1,720,152	-		DZA65_RS08210	0.14	+0.1
1,720,152	-		DZA65_RS08210	0.14	-0.6
1,720,303	+				+0.1
1,720,303	+		DZA65_RS08210	0.16	+0.4
1,720,304	-		DZA65_RS08210	0.16	+2.7
1,720,340	+		DZA65_RS08210	0.16	+1.4
1,720,340	+		DZA65_RS08210	0.16	+0.8
1,720,341	-		DZA65_RS08210	0.16	-1.0
1,720,341	-		DZA65_RS08210	0.16	-1.0
1,720,341	-		DZA65_RS08210	0.16	+1.4
1,720,341	-		DZA65_RS08210	0.16	-0.6
1,720,343	+		DZA65_RS08210	0.16	-0.6
1,720,382	+		DZA65_RS08210	0.16	-1.6
1,720,382	+		DZA65_RS08210	0.16	+0.4
1,720,382	+		DZA65_RS08210	0.16	-0.9
1,720,383	-		DZA65_RS08210	0.16	+1.4
1,720,405	+		DZA65_RS08210	0.17	-2.3
1,720,405	+		DZA65_RS08210	0.17	-2.0
1,720,405	+		DZA65_RS08210	0.17	-1.3
1,720,405	+		DZA65_RS08210	0.17	-1.4
1,720,406	-		DZA65_RS08210	0.17	-1.8
1,720,406	-		DZA65_RS08210	0.17	+0.0
1,720,406	-		DZA65_RS08210	0.17	-0.1
1,720,406	-		DZA65_RS08210	0.17	+1.2
1,720,406	-		DZA65_RS08210	0.17	+0.9
1,720,444	-		DZA65_RS08210	0.17	+2.7
1,720,463	+		DZA65_RS08210	0.17	+2.4
1,720,511	+		DZA65_RS08210	0.18	-1.9
1,720,511	+		DZA65_RS08210	0.18	-1.2
1,720,511	+		DZA65_RS08210	0.18	-1.8
1,720,512	-		DZA65_RS08210	0.18	-1.4
1,720,512	-		DZA65_RS08210	0.18	-0.6
1,720,647	+		DZA65_RS08210	0.20	-0.2
1,720,648	-		DZA65_RS08210	0.20	-2.6
1,720,797	+		DZA65_RS08210	0.21	+0.4
1,720,798	-		DZA65_RS08210	0.21	+0.1
1,720,798	-		DZA65_RS08210	0.21	-0.9
1,720,896	-		DZA65_RS08210	0.22	-0.6
1,720,920	+		DZA65_RS08210	0.23	+1.2
1,720,920	+		DZA65_RS08210	0.23	-0.8
1,720,921	-		DZA65_RS08210	0.23	+1.4
1,720,989	+		DZA65_RS08210	0.24	-0.2
1,720,990	-		DZA65_RS08210	0.24	-0.8
1,721,057	+		DZA65_RS08210	0.24	-0.2
1,721,057	+		DZA65_RS08210	0.24	+0.1
1,721,058	-		DZA65_RS08210	0.24	+0.2
1,721,058	-		DZA65_RS08210	0.24	-1.6
1,721,126	+		DZA65_RS08210	0.25	-0.2
1,721,201	+		DZA65_RS08210	0.26	+0.1
1,721,208	+		DZA65_RS08210	0.26	-0.2
1,721,208	+		DZA65_RS08210	0.26	+1.8
1,721,209	-		DZA65_RS08210	0.26	-0.7
1,721,209	-		DZA65_RS08210	0.26	-1.0
1,721,209	-		DZA65_RS08210	0.26	-0.8
1,721,209	-		DZA65_RS08210	0.26	-1.6
1,721,209	-		DZA65_RS08210	0.26	+0.8
1,721,209	-		DZA65_RS08210	0.26	-0.6
1,721,209	-		DZA65_RS08210	0.26	-1.4
1,721,209	-		DZA65_RS08210	0.26	-0.3
1,721,209	-		DZA65_RS08210	0.26	-1.0
1,721,209	-		DZA65_RS08210	0.26	-0.6
1,721,209	-		DZA65_RS08210	0.26	-0.5
1,721,209	-		DZA65_RS08210	0.26	-1.9
1,721,210	+		DZA65_RS08210	0.26	-1.9
1,721,210	+		DZA65_RS08210	0.26	+0.5
1,721,210	+		DZA65_RS08210	0.26	-1.4
1,721,210	+		DZA65_RS08210	0.26	+0.4
1,721,210	+		DZA65_RS08210	0.26	-0.2
1,721,210	+		DZA65_RS08210	0.26	-1.2
1,721,211	-		DZA65_RS08210	0.26	-0.5
1,721,211	-		DZA65_RS08210	0.26	-0.8
1,721,211	-		DZA65_RS08210	0.26	-1.2
1,721,211	-		DZA65_RS08210	0.26	-0.6
1,721,211	-		DZA65_RS08210	0.26	-0.6
1,721,304	+		DZA65_RS08210	0.27	+0.0
1,721,304	+		DZA65_RS08210	0.27	+2.3
1,721,305	-		DZA65_RS08210	0.27	-0.2
1,721,476	+		DZA65_RS08210	0.29	+1.0
1,721,476	+		DZA65_RS08210	0.29	-0.2
1,721,571	+		DZA65_RS08210	0.30	-0.2
1,721,625	+		DZA65_RS08210	0.31	-0.6
1,721,625	+		DZA65_RS08210	0.31	+0.1
1,721,904	+		DZA65_RS08210	0.34	+1.1
1,721,905	-		DZA65_RS08210	0.34	+0.4
1,721,981	-		DZA65_RS08210	0.35	+0.2
1,721,981	-		DZA65_RS08210	0.35	+0.2
1,722,056	+		DZA65_RS08210	0.36	-1.5
1,722,056	+		DZA65_RS08210	0.36	-1.9
1,722,056	+		DZA65_RS08210	0.36	+0.1
1,722,057	-		DZA65_RS08210	0.36	-0.8
1,722,057	-		DZA65_RS08210	0.36	+0.4
1,722,057	-		DZA65_RS08210	0.36	+0.3
1,722,061	+		DZA65_RS08210	0.36	+1.1
1,722,061	+		DZA65_RS08210	0.36	-0.2
1,722,061	+		DZA65_RS08210	0.36	+0.1
1,722,061	+		DZA65_RS08210	0.36	+0.6
1,722,061	+		DZA65_RS08210	0.36	-1.6
1,722,061	+		DZA65_RS08210	0.36	-0.2
1,722,061	+		DZA65_RS08210	0.36	-1.2
1,722,061	+		DZA65_RS08210	0.36	-0.6
1,722,061	+		DZA65_RS08210	0.36	-0.4
1,722,061	+		DZA65_RS08210	0.36	+1.0
1,722,061	+		DZA65_RS08210	0.36	+0.7
1,722,061	+		DZA65_RS08210	0.36	-2.6
1,722,061	+		DZA65_RS08210	0.36	+0.7
1,722,061	+		DZA65_RS08210	0.36	+0.9
1,722,061	+		DZA65_RS08210	0.36	-0.6
1,722,061	+		DZA65_RS08210	0.36	+1.1
1,722,062	-		DZA65_RS08210	0.36	-1.1
1,722,062	-		DZA65_RS08210	0.36	+1.4
1,722,062	-		DZA65_RS08210	0.36	+0.5
1,722,062	-		DZA65_RS08210	0.36	-1.0
1,722,062	-		DZA65_RS08210	0.36	-1.6
1,722,062	-		DZA65_RS08210	0.36	+0.7
1,722,062	-		DZA65_RS08210	0.36	+0.8
1,722,062	-		DZA65_RS08210	0.36	-0.6
1,722,062	-		DZA65_RS08210	0.36	-1.4
1,722,062	-		DZA65_RS08210	0.36	-0.9
1,722,062	-		DZA65_RS08210	0.36	+2.2
1,722,062	-				-2.0
1,722,062	-		DZA65_RS08210	0.36	+0.8
1,722,290	+		DZA65_RS08210	0.39	-0.4
1,722,361	+		DZA65_RS08210	0.40	-0.4
1,722,362	-		DZA65_RS08210	0.40	-0.6
1,722,362	-		DZA65_RS08210	0.40	-0.6
1,722,362	-		DZA65_RS08210	0.40	-0.2
1,722,375	+		DZA65_RS08210	0.40	+0.1
1,722,376	-		DZA65_RS08210	0.40	+0.1
1,722,376	-		DZA65_RS08210	0.40	+2.2
1,722,376	-		DZA65_RS08210	0.40	+1.4
1,722,376	-		DZA65_RS08210	0.40	-0.9
1,722,376	-		DZA65_RS08210	0.40	-1.8
1,722,428	+		DZA65_RS08210	0.40	-1.6
1,722,428	+		DZA65_RS08210	0.40	-1.2
1,722,493	+		DZA65_RS08210	0.41	-0.5
1,722,493	+		DZA65_RS08210	0.41	-1.9
1,722,493	+		DZA65_RS08210	0.41	-1.4
1,722,493	+		DZA65_RS08210	0.41	-1.9
1,722,493	+		DZA65_RS08210	0.41	+1.0
1,722,493	+		DZA65_RS08210	0.41	+1.1
1,722,493	+		DZA65_RS08210	0.41	+0.9
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