Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18645

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
4,015,022	-		DZA65_RS18640	0.20	+0.2
4,015,022	-		DZA65_RS18640	0.20	+0.1
4,015,022	-		DZA65_RS18640	0.20	-1.4
4,015,022	-		DZA65_RS18640	0.20	-0.1
4,015,022	-		DZA65_RS18640	0.20	-1.3
4,015,048	+		DZA65_RS18640	0.22	-1.4
4,015,048	+		DZA65_RS18640	0.22	-0.8
4,015,049	-		DZA65_RS18640	0.22	+0.5
4,015,148	+		DZA65_RS18640	0.32	+1.0
4,015,148	+		DZA65_RS18640	0.32	+0.2
4,015,166	+		DZA65_RS18640	0.34	+0.3
4,015,166	+		DZA65_RS18640	0.34	-0.7
4,015,167	-		DZA65_RS18640	0.34	-0.1
4,015,167	-		DZA65_RS18640	0.34	+1.0
4,015,167	-		DZA65_RS18640	0.34	+1.5
4,015,186	+		DZA65_RS18640	0.36	-0.1
4,015,186	+		DZA65_RS18640	0.36	+1.0
4,015,186	+		DZA65_RS18640	0.36	+0.3
4,015,186	+		DZA65_RS18640	0.36	-0.1
4,015,186	+		DZA65_RS18640	0.36	+1.0
4,015,186	+		DZA65_RS18640	0.36	+1.5
4,015,186	+		DZA65_RS18640	0.36	-0.7
4,015,186	+		DZA65_RS18640	0.36	-1.2
4,015,186	+		DZA65_RS18640	0.36	-1.0
4,015,186	+		DZA65_RS18640	0.36	+1.9
4,015,187	-		DZA65_RS18640	0.36	-0.8
4,015,187	-		DZA65_RS18640	0.36	-0.5
4,015,187	-		DZA65_RS18640	0.36	+2.6
4,015,187	-		DZA65_RS18640	0.36	-1.3
4,015,187	-		DZA65_RS18640	0.36	-1.7
4,015,187	-		DZA65_RS18640	0.36	-0.3
4,015,187	-		DZA65_RS18640	0.36	+1.5
4,015,187	-		DZA65_RS18640	0.36	-3.0
4,015,252	+		DZA65_RS18640	0.43	-0.7
4,015,252	+		DZA65_RS18640	0.43	-2.4
4,015,252	+		DZA65_RS18640	0.43	+0.2
4,015,256	+		DZA65_RS18640	0.43	+0.7
4,015,256	+		DZA65_RS18640	0.43	-1.9
4,015,256	+		DZA65_RS18640	0.43	-1.1
4,015,256	+		DZA65_RS18640	0.43	-0.4
4,015,257	-		DZA65_RS18640	0.43	-0.1
4,015,257	-		DZA65_RS18640	0.43	+0.1
4,015,320	+		DZA65_RS18640	0.49	-1.1
4,015,321	-		DZA65_RS18640	0.50	-2.1
4,015,420	+		DZA65_RS18640	0.59	-1.5
4,015,420	+		DZA65_RS18640	0.59	-1.1
4,015,420	+		DZA65_RS18640	0.59	-0.9
4,015,420	+		DZA65_RS18640	0.59	+0.0
4,015,420	+		DZA65_RS18640	0.59	-0.1
4,015,420	+		DZA65_RS18640	0.59	+1.0
4,015,420	+				-0.9
4,015,420	+		DZA65_RS18640	0.59	+0.0
4,015,421	-		DZA65_RS18640	0.59	+1.2
4,015,421	-		DZA65_RS18640	0.59	-1.2
4,015,421	-		DZA65_RS18640	0.59	-1.5
4,015,421	-		DZA65_RS18640	0.59	+1.1
4,015,438	+		DZA65_RS18640	0.61	-0.9
4,015,438	+		DZA65_RS18640	0.61	-0.5
4,015,439	-		DZA65_RS18640	0.61	-0.9
4,015,439	-		DZA65_RS18640	0.61	-0.1
4,015,439	-		DZA65_RS18640	0.61	-1.4
4,015,441	+		DZA65_RS18640	0.61	+1.3
4,015,441	+		DZA65_RS18640	0.61	+2.9
4,015,441	+		DZA65_RS18640	0.61	-2.6
4,015,441	+		DZA65_RS18640	0.61	-0.7
4,015,441	+		DZA65_RS18640	0.61	+0.7
4,015,441	+		DZA65_RS18640	0.61	-1.9
4,015,441	+		DZA65_RS18640	0.61	+0.3
4,015,442	-		DZA65_RS18640	0.62	+0.6
4,015,442	-		DZA65_RS18640	0.62	-2.1
4,015,442	-		DZA65_RS18640	0.62	+0.6
4,015,442	-		DZA65_RS18640	0.62	-0.9
4,015,529	+		DZA65_RS18640	0.70	+0.1
4,015,529	+		DZA65_RS18640	0.70	+0.1
4,015,529	+		DZA65_RS18640	0.70	+0.5
4,015,567	+		DZA65_RS18640	0.74	+0.5
4,015,599	+		DZA65_RS18640	0.77	+0.5
4,015,599	+		DZA65_RS18640	0.77	-1.3
4,015,599	+		DZA65_RS18640	0.77	-0.4
4,015,599	+		DZA65_RS18640	0.77	+0.3
4,015,600	-				+0.1
4,015,600	-		DZA65_RS18640	0.77	-0.7
4,015,600	-		DZA65_RS18640	0.77	+1.1
4,015,600	-		DZA65_RS18640	0.77	-0.5
4,015,600	-		DZA65_RS18640	0.77	+1.2
4,015,672	+				-1.3
4,015,690	+		DZA65_RS18640	0.86	-0.9
4,015,690	+		DZA65_RS18640	0.86	+1.5
4,015,690	+		DZA65_RS18640	0.86	-0.3
4,015,690	+		DZA65_RS18640	0.86	-0.3
4,015,690	+		DZA65_RS18640	0.86	-1.3
4,015,690	+		DZA65_RS18640	0.86	-0.5
4,015,691	-		DZA65_RS18640	0.86	-0.1
4,015,691	-		DZA65_RS18640	0.86	+0.7
4,015,691	-		DZA65_RS18640	0.86	-0.5
4,015,691	-		DZA65_RS18640	0.86	-1.5
4,015,691	-		DZA65_RS18640	0.86	-0.1
4,015,691	-		DZA65_RS18640	0.86	-1.5
4,015,743	-				-1.3
4,015,765	+				+0.5
4,015,765	+				-1.6
4,015,765	+				-1.3
4,015,766	-				+0.6
4,015,766	-				+0.2
4,015,766	-				-0.1
4,015,766	-				-1.0
4,015,774	+				-1.1
4,015,774	+				+0.9
4,015,775	-				+1.1
4,015,775	-				-0.5
4,015,814	+				+0.5
4,015,815	-				+0.5
4,015,815	-				+0.7
4,015,841	+				+1.5
4,015,842	-				-2.1
4,015,873	+				+0.1
4,015,873	+				-2.3
4,015,873	+				+0.5
4,015,873	+				+0.3
4,015,873	+				-2.1
4,015,873	+				-1.5
4,015,873	+				+0.6
4,015,873	+				-1.1
4,015,874	-				+0.2
4,015,874	-				-2.4
4,015,874	-				+0.0
4,015,874	-				-0.1
4,015,874	-				-0.9
4,015,874	-				-0.5
4,015,874	-				-1.7
4,015,874	-				-0.1
4,015,874	-				-0.2
4,015,874	-				-1.1
4,015,887	-				+1.9
4,015,887	-				-0.9
4,015,887	-				-0.5
4,015,887	-				-0.1
4,015,890	+				-0.3
4,015,890	+				-2.3
4,015,890	+				-1.2
4,015,890	+				+0.1
4,015,891	-				-0.4
4,015,891	-				-0.3
4,015,891	-				-2.3
4,015,891	-				+0.0
4,015,891	-				-1.5
4,015,891	-				+0.8
4,015,891	-				+0.8
4,015,891	-				+1.5
4,015,891	-				+1.0
4,015,891	-				-0.4
4,015,891	-				-2.9
4,015,891	-				+2.3
4,015,895	+				-1.9
4,015,897	+				-0.2
4,015,897	+				+3.2
4,015,897	+				+0.7
4,015,897	+				-1.9
4,015,897	+				-0.1
4,015,897	+				-0.5
4,015,897	+				+1.6
4,015,897	+				-0.7
4,015,897	+				-0.1
4,015,897	+				-1.2
4,015,897	+				-1.1
4,015,897	+				-1.1
4,015,897	+				-2.0
4,015,897	+				+1.2
4,015,897	+				-1.3
4,015,897	+				-0.5
4,015,897	+				+2.0
4,015,897	+				+1.5
4,015,897	+				-0.1
4,015,898	-				-0.3
4,015,898	-				+0.8
4,015,898	-				+1.5
4,015,898	-				-2.0
4,015,898	-				+0.7
4,015,898	-				+0.5
4,015,898	-				-0.0
4,015,898	-				-1.8
4,015,898	-				-0.1
4,015,898	-				-2.0
4,015,898	-				+2.2
4,015,898	-				-0.9
4,015,898	-				-1.7
4,015,898	-				-0.1
4,015,898	-				+0.8
4,015,898	-				-0.4
4,015,898	-				+1.0
4,015,898	-				-0.5
4,015,915	+				-0.8
4,015,920	+				+0.3
4,015,920	+				-0.9
4,015,920	+				-0.1
4,015,932	+				+0.5
4,017,321	+				-1.9
4,017,321	+				+0.5
4,017,321	+				-0.7
4,017,321	+				-0.3
4,017,321	+				-0.1
4,017,321	+				+1.6
4,017,321	+				+0.1
4,017,322	-				+0.1
4,017,322	-				+0.9
4,017,322	-				+1.1
4,017,322	-				-1.5
4,017,322	-				-1.7
4,017,322	-				+1.2
4,017,322	-				-0.5
4,017,322	-				-1.1
4,017,322	-				+0.2
4,017,322	-				-1.9
4,017,322	-				+2.1
4,017,322	-				+0.2
4,017,322	-				-1.9
4,017,322	-				+0.8
4,017,336	+				-1.4
4,017,336	+				+1.2
4,017,337	-				-0.2
4,017,337	-				-0.5
4,017,337	-				+1.2
4,017,348	+				-0.5
4,017,348	+				+0.1
4,017,349	-				+1.8
4,017,365	+				-1.5
4,017,365	+				-2.3
4,017,366	-				+1.1
4,017,382	+				+0.5
4,017,382	+				-1.3
4,017,382	+				-0.5
4,017,383	-				+0.5
4,017,395	+				-1.9
4,017,395	+				-1.2
4,017,395	+				-0.3
4,017,396	-				+0.5
4,017,399	+				+0.1
4,017,399	+				-0.5
4,017,399	+				-2.3
4,017,399	+				-0.5
4,017,399	+				-0.1
4,017,399	+				-0.1
4,017,399	+				+0.5
4,017,399	+				-0.5
4,017,399	+				+1.1
4,017,399	+				-0.5
4,017,399	+				-1.1
4,017,400	-				-2.3
4,017,400	-				+0.2
4,017,400	-				-0.3
4,017,400	-				+1.0
4,017,400	-				+0.7
4,017,400	-				-2.2
4,017,416	+				-0.9
4,017,416	+				-0.9
4,017,416	+				+1.0
4,017,416	+				+0.1
4,017,416	+				-0.6
4,017,417	-				-0.5
4,017,420	+				+1.7
4,017,420	+				+1.3
4,017,420	+				+0.9
4,017,420	+				-1.3
4,017,420	+				-0.9
4,017,421	-				-0.9
4,017,421	-				-0.4
4,017,421	-				+0.7
4,017,421	-				-1.3
4,017,421	-				-0.8
4,017,421	-				+1.7
4,017,429	+				-1.9
4,017,497	+				-1.1
4,017,497	+				-2.8
4,017,498	-				-2.2
4,017,535	+				-1.6
4,017,535	+				-4.0
4,017,536	-				-1.7
4,017,536	-				-0.5
4,017,736	+		DZA65_RS18650	0.27	-1.9
4,017,737	-		DZA65_RS18650	0.27	+0.5
4,017,737	-		DZA65_RS18650	0.27	+0.7
4,018,010	+		DZA65_RS18650	0.53	-1.1
4,018,010	+		DZA65_RS18650	0.53	-1.0
4,018,010	+		DZA65_RS18650	0.53	-1.2
4,018,011	-		DZA65_RS18650	0.53	+0.1
4,018,011	-		DZA65_RS18650	0.53	-1.1
4,018,074	-		DZA65_RS18650	0.59	-1.7
4,018,074	-		DZA65_RS18650	0.59	-2.3
4,018,083	+		DZA65_RS18650	0.60	-1.5