Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18330

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
3,952,818	-		DZA65_RS18320	0.38	-0.6
3,952,905	+		DZA65_RS18320	0.50	-0.9
3,952,905	+		DZA65_RS18320	0.50	+0.8
3,952,929	+		DZA65_RS18320	0.53	-0.2
3,952,929	+		DZA65_RS18320	0.53	-0.7
3,952,929	+		DZA65_RS18320	0.53	-1.8
3,952,929	+		DZA65_RS18320	0.53	-1.6
3,952,929	+		DZA65_RS18320	0.53	+0.3
3,952,930	-		DZA65_RS18320	0.53	-0.9
3,952,930	-		DZA65_RS18320	0.53	-2.7
3,952,930	-		DZA65_RS18320	0.53	-1.2
3,952,930	-		DZA65_RS18320	0.53	-0.9
3,952,932	-		DZA65_RS18320	0.54	-1.0
3,952,932	-		DZA65_RS18320	0.54	-1.2
3,953,192	+		DZA65_RS18320	0.89	-0.2
3,953,215	+				-2.0
3,953,217	+				+0.4
3,953,218	-				-2.9
3,953,270	+				+1.8
3,953,270	+				-0.2
3,953,271	-				+0.9
3,953,271	-				-0.2
3,953,289	+				-0.7
3,953,289	+				+1.1
3,953,290	-				+0.4
3,953,290	-				-1.2
3,953,290	-				-1.6
3,953,290	-				-1.2
3,953,290	-				-1.1
3,953,291	+				-1.4
3,953,291	+				+0.5
3,953,291	+				+2.4
3,953,291	+				+1.4
3,953,291	+				-0.9
3,953,291	+				-0.2
3,953,291	+				+0.1
3,953,291	+				-1.2
3,953,291	+				-0.2
3,953,291	+				-0.2
3,953,291	+				+1.5
3,953,291	+				-0.5
3,953,291	+				+1.4
3,953,291	+				+2.2
3,953,291	+				-0.3
3,953,291	+				+0.0
3,953,292	-				+0.3
3,953,292	-				-0.9
3,953,292	-				+1.4
3,953,292	-				+1.0
3,953,292	-				+0.4
3,953,292	-				-1.9
3,953,292	-				-0.1
3,953,292	-				-3.2
3,953,292	-				-0.6
3,953,292	-				+0.4
3,953,292	-				+0.0
3,953,292	-				-0.7
3,953,292	-				-1.1
3,953,292	-				-2.0
3,953,292	-				+1.4
3,953,292	-				-0.9
3,953,292	-				-0.9
3,953,292	-				-0.7
3,953,292	-				+1.4
3,953,292	-				+2.6
3,953,295	+				-2.0
3,953,295	+				-0.0
3,953,295	+				-0.9
3,953,295	+				-1.0
3,953,295	+				-0.6
3,953,295	+				-0.6
3,953,296	-				+0.2
3,953,296	-				-1.6
3,953,364	-				-0.1
3,953,364	-				+0.5
3,953,364	-				+0.3
3,953,364	-				-1.1
3,953,364	-				+2.7
3,953,364	-				-1.4
3,953,450	+				-1.3
3,953,450	+				-0.9
3,953,451	-				-1.2
3,953,451	-				-1.9
3,953,461	+				-0.6
3,953,461	+				-0.6
3,953,462	-				-0.9
3,953,494	-				+1.4
3,953,494	-				+0.3
3,953,494	-				-1.6
3,953,494	-				+1.1
3,953,585	+				+1.0
3,953,586	-				-1.2
3,953,594	+				-0.2
3,953,597	+				-1.1
3,953,598	-				+0.3
3,953,598	-				-1.4
3,953,624	+				-0.9
3,953,625	-				-0.6
3,953,625	-				-1.0
3,953,625	-				-0.4
3,953,633	+				-0.6
3,953,633	+				-0.2
3,953,633	+				-0.2
3,953,633	+				-0.4
3,953,633	+				-1.1
3,953,633	+				-1.7
3,953,633	+				-0.4
3,953,634	-				-0.9
3,953,634	-				-0.2
3,953,634	-				-0.5
3,953,634	-				-2.5
3,953,635	+				+0.1
3,953,635	+				+0.2
3,953,635	+				-0.2
3,953,635	+				+1.5
3,953,635	+				-0.9
3,953,635	+				-1.2
3,953,635	+				-0.4
3,953,635	+				-2.5
3,953,636	-				-0.9
3,953,636	-				+0.8
3,953,636	-				+0.4
3,953,636	-				+1.2
3,953,636	-				-0.6
3,953,636	-				+0.1
3,953,636	-				-0.9
3,953,636	-				-0.4
3,953,636	-				-2.3
3,953,662	+				+0.4
3,953,662	+				-1.2
3,953,666	+				+3.0
3,953,716	+				+0.4
3,953,716	+				-2.3
3,953,717	-				+0.4
3,953,717	-				+0.9
3,953,717	-				+0.8
3,953,717	-				-1.2
3,953,717	-				-0.6
3,953,717	-				+1.8
3,953,717	-				-0.6
3,953,717	-				-1.6
3,953,717	-				-0.2
3,953,718	+				+1.1
3,953,718	+				+1.6
3,953,718	+				-1.4
3,953,719	-				+2.2
3,953,719	-				-0.4
3,953,719	-				-1.2
3,953,719	-				+1.8
3,953,759	+				+1.1
3,953,759	+				-2.6
3,953,759	+				-0.6
3,953,759	+				-3.0
3,953,760	-				-1.6
3,953,760	-				-0.8
3,953,760	-				+1.4
3,953,783	-				-0.2
3,953,791	+				-1.4
3,953,791	+				-1.7
3,953,791	+				-2.3
3,953,791	+				+0.4
3,953,791	+				-1.3
3,953,791	+				+0.4
3,953,791	+				+2.4
3,953,791	+				-0.9
3,953,792	-				+0.3
3,953,792	-				-1.2
3,953,792	-				+0.8
3,953,792	-				+0.4
3,953,857	-				-0.6
3,953,857	-				-0.7
3,953,890	+				-0.4
3,953,890	+				+0.4
3,953,890	+				-0.6
3,953,890	+				-1.2
3,953,890	+				-0.2
3,953,890	+				+0.1
3,953,890	+				-1.4
3,953,890	+				+0.4
3,953,890	+				-1.3
3,953,890	+				-3.6
3,953,891	-				+1.4
3,953,891	-				+1.4
3,953,891	-				+1.4
3,953,891	-				+0.5
3,953,891	-				+1.0
3,953,891	-				-0.9
3,953,900	+				+0.4
3,953,900	+				+0.7
3,953,900	+				-0.6
3,953,900	+				+1.8
3,953,900	+				-0.9
3,953,900	+				+0.6
3,953,900	+				+1.0
3,953,901	-				-0.4
3,953,901	-				-0.8
3,953,901	-				+1.8
3,953,901	-				+0.2
3,953,906	+				-2.0
3,953,906	+				-0.2
3,953,906	+				+0.7
3,953,907	-				-0.1
3,953,907	-				+0.0
3,953,909	+				-1.6
3,953,909	+				-0.6
3,953,909	+				+1.4
3,953,909	+				+0.2
3,953,910	-				-1.2
3,953,910	-				+0.4
3,953,910	-				+0.1
3,953,910	-				-1.9
3,953,910	-				+1.0
3,953,910	-				-0.4
3,953,910	-				+2.0
3,953,910	-				+2.4
3,953,910	-				-0.6
3,953,910	-				+0.4
3,953,910	-				+1.9
3,953,911	+				+0.7
3,953,911	+				-1.2
3,953,912	-				+0.8
3,953,912	-				+0.1
3,953,912	-				+1.8
3,953,912	-				-0.9
3,953,929	+				-0.0
3,953,994	+		DZA65_RS18330	0.11	-1.6
3,953,995	-		DZA65_RS18330	0.11	-2.7
3,954,016	+		DZA65_RS18330	0.12	+0.4
3,954,016	+		DZA65_RS18330	0.12	+0.4
3,954,041	+		DZA65_RS18330	0.13	+1.4
3,954,041	+		DZA65_RS18330	0.13	-0.6
3,954,041	+		DZA65_RS18330	0.13	+0.8
3,954,041	+		DZA65_RS18330	0.13	-1.4
3,954,041	+		DZA65_RS18330	0.13	-3.0
3,954,042	-		DZA65_RS18330	0.13	-1.2
3,954,042	-		DZA65_RS18330	0.13	+0.4
3,954,042	-		DZA65_RS18330	0.13	-0.4
3,954,042	-		DZA65_RS18330	0.13	-0.2
3,954,042	-		DZA65_RS18330	0.13	-0.6
3,954,075	+		DZA65_RS18330	0.15	-0.2
3,954,075	+		DZA65_RS18330	0.15	+2.2
3,954,075	+		DZA65_RS18330	0.15	-2.2
3,954,076	-		DZA65_RS18330	0.15	+0.4
3,954,076	-		DZA65_RS18330	0.15	-0.4
3,954,076	-		DZA65_RS18330	0.15	-0.6
3,954,076	-		DZA65_RS18330	0.15	+0.7
3,954,076	-		DZA65_RS18330	0.15	+0.3
3,954,086	+		DZA65_RS18330	0.16	-2.2
3,954,086	+		DZA65_RS18330	0.16	+1.2
3,954,110	+		DZA65_RS18330	0.17	+0.8
3,954,111	-		DZA65_RS18330	0.17	-0.6
3,954,146	+		DZA65_RS18330	0.19	+1.1
3,954,158	+		DZA65_RS18330	0.19	-0.9
3,954,158	+		DZA65_RS18330	0.19	-0.3
3,954,158	+		DZA65_RS18330	0.19	-1.6
3,954,158	+		DZA65_RS18330	0.19	-1.2
3,954,158	+		DZA65_RS18330	0.19	-1.7
3,954,158	+		DZA65_RS18330	0.19	+2.1
3,954,194	+		DZA65_RS18330	0.21	-0.7
3,954,194	+		DZA65_RS18330	0.21	-1.9
3,954,196	+		DZA65_RS18330	0.21	-1.4
3,954,196	+		DZA65_RS18330	0.21	-1.9
3,954,196	+		DZA65_RS18330	0.21	-1.0
3,954,196	+		DZA65_RS18330	0.21	+0.6
3,954,196	+		DZA65_RS18330	0.21	-1.3
3,954,197	-		DZA65_RS18330	0.21	+0.8
3,954,197	-		DZA65_RS18330	0.21	+0.7
3,954,241	+		DZA65_RS18330	0.24	-0.3
3,954,248	+		DZA65_RS18330	0.24	-0.1
3,954,249	-				+0.4
3,954,249	-		DZA65_RS18330	0.24	+0.0
3,954,249	-		DZA65_RS18330	0.24	-1.4
3,954,249	-		DZA65_RS18330	0.24	-2.6
3,954,311	+		DZA65_RS18330	0.27	-0.8
3,954,311	+		DZA65_RS18330	0.27	+0.4
3,954,312	-		DZA65_RS18330	0.27	+0.3
3,954,312	-		DZA65_RS18330	0.27	-0.6
3,954,312	-		DZA65_RS18330	0.27	-0.9
3,954,448	-		DZA65_RS18330	0.34	-1.3
3,954,448	-		DZA65_RS18330	0.34	-2.3
3,954,482	+		DZA65_RS18330	0.36	+0.3
3,954,482	+		DZA65_RS18330	0.36	-0.3
3,954,509	+		DZA65_RS18330	0.37	+1.9
3,954,509	+		DZA65_RS18330	0.37	-0.3
3,954,510	-		DZA65_RS18330	0.37	+1.4
3,954,510	-		DZA65_RS18330	0.37	+0.4
3,954,510	-		DZA65_RS18330	0.37	+0.6
3,954,512	+		DZA65_RS18330	0.37	+0.5
3,954,512	+		DZA65_RS18330	0.37	+0.4
3,954,512	+		DZA65_RS18330	0.37	-2.4
3,954,512	+		DZA65_RS18330	0.37	-1.4
3,954,512	+		DZA65_RS18330	0.37	-1.6
3,954,512	+		DZA65_RS18330	0.37	+1.8
3,954,512	+		DZA65_RS18330	0.37	+0.7
3,954,513	-		DZA65_RS18330	0.37	-0.3
3,954,513	-		DZA65_RS18330	0.37	-0.3
3,954,513	-		DZA65_RS18330	0.37	+0.8
3,954,513	-		DZA65_RS18330	0.37	-1.3
3,954,516	+		DZA65_RS18330	0.38	-2.3
3,954,516	+		DZA65_RS18330	0.38	+0.7
3,954,517	-		DZA65_RS18330	0.38	-1.2
3,954,517	-		DZA65_RS18330	0.38	-1.4
3,954,517	-		DZA65_RS18330	0.38	-1.2
3,954,533	-		DZA65_RS18330	0.39	-0.8
3,954,544	+		DZA65_RS18330	0.39	-0.6
3,954,544	+		DZA65_RS18330	0.39	-1.0
3,954,544	+		DZA65_RS18330	0.39	-1.1
3,954,544	+		DZA65_RS18330	0.39	-1.4
3,954,544	+		DZA65_RS18330	0.39	+0.2
3,954,544	+		DZA65_RS18330	0.39	-0.1
3,954,544	+		DZA65_RS18330	0.39	+0.1
3,954,545	-		DZA65_RS18330	0.39	-0.9
3,954,545	-		DZA65_RS18330	0.39	-1.5
3,954,545	-		DZA65_RS18330	0.39	-1.7
3,954,545	-		DZA65_RS18330	0.39	+2.2
3,954,545	-		DZA65_RS18330	0.39	-0.6
3,954,545	-		DZA65_RS18330	0.39	+0.4
3,954,568	-		DZA65_RS18330	0.40	-2.5
3,954,749	+		DZA65_RS18330	0.50	+1.7
3,954,750	-		DZA65_RS18330	0.50	+0.6
3,954,750	-		DZA65_RS18330	0.50	-1.6
3,954,845	-		DZA65_RS18330	0.55	-1.9
3,954,875	+		DZA65_RS18330	0.56	+0.7
3,954,875	+		DZA65_RS18330	0.56	-2.2
3,954,875	+		DZA65_RS18330	0.56	-0.6
3,954,875	+		DZA65_RS18330	0.56	-0.9
3,954,875	+		DZA65_RS18330	0.56	+0.1
3,954,875	+		DZA65_RS18330	0.56	+0.9
3,954,875	+		DZA65_RS18330	0.56	-1.6
3,954,875	+		DZA65_RS18330	0.56	-1.7
3,954,875	+		DZA65_RS18330	0.56	-2.7
3,954,875	+		DZA65_RS18330	0.56	-0.2
3,954,875	+		DZA65_RS18330	0.56	-1.2
3,954,875	+		DZA65_RS18330	0.56	+0.4
3,954,875	+		DZA65_RS18330	0.56	+0.3
3,954,875	+		DZA65_RS18330	0.56	-1.3
3,954,875	+		DZA65_RS18330	0.56	+2.0
3,954,875	+		DZA65_RS18330	0.56	-0.2
3,954,875	+		DZA65_RS18330	0.56	+1.0
3,954,875	+		DZA65_RS18330	0.56	-0.3
3,954,875	+		DZA65_RS18330	0.56	+0.6
3,954,875	+		DZA65_RS18330	0.56	+0.4
3,954,875	+		DZA65_RS18330	0.56	-0.6
3,954,875	+		DZA65_RS18330	0.56	-0.4
3,954,875	+		DZA65_RS18330	0.56	+0.4
3,954,875	+		DZA65_RS18330	0.56	-0.9
3,954,876	-		DZA65_RS18330	0.56	-0.8
3,954,876	-		DZA65_RS18330	0.56	-2.0
3,954,876	-		DZA65_RS18330	0.56	+1.4
3,954,876	-		DZA65_RS18330	0.56	-1.7
3,954,876	-		DZA65_RS18330	0.56	-1.2
3,954,876	-		DZA65_RS18330	0.56	-0.6
3,954,876	-		DZA65_RS18330	0.56	-0.6
3,954,876	-		DZA65_RS18330	0.56	-1.4
3,954,876	-		DZA65_RS18330	0.56	-0.6
3,954,876	-		DZA65_RS18330	0.56	-1.2
3,954,876	-		DZA65_RS18330	0.56	+0.1
3,954,876	-		DZA65_RS18330	0.56	-0.4
3,954,876	-		DZA65_RS18330	0.56	-0.2
3,954,876	-		DZA65_RS18330	0.56	-0.3
3,954,876	-		DZA65_RS18330	0.56	+0.2
3,954,876	-		DZA65_RS18330	0.56	-1.2
3,954,876	-		DZA65_RS18330	0.56	-1.4
3,954,876	-		DZA65_RS18330	0.56	-0.2
3,954,881	+		DZA65_RS18330	0.56	+0.4
3,954,881	+		DZA65_RS18330	0.56	-1.4
3,954,882	-		DZA65_RS18330	0.56	-1.9
3,954,882	-		DZA65_RS18330	0.56	+0.8
3,954,918	+		DZA65_RS18330	0.58	+1.9
3,954,919	-		DZA65_RS18330	0.58	-1.6
3,954,919	-		DZA65_RS18330	0.58	+0.2
3,954,941	+		DZA65_RS18330	0.59	-1.6
3,954,941	+		DZA65_RS18330	0.59	+0.8
3,954,941	+		DZA65_RS18330	0.59	-1.2
3,954,941	+		DZA65_RS18330	0.59	-1.8
3,954,941	+		DZA65_RS18330	0.59	-0.5
3,954,941	+		DZA65_RS18330	0.59	-0.9
3,954,942	-		DZA65_RS18330	0.60	+1.8
3,954,942	-		DZA65_RS18330	0.60	-1.2
3,954,942	-		DZA65_RS18330	0.60	+0.2
3,954,942	-		DZA65_RS18330	0.60	+1.4
3,954,942	-		DZA65_RS18330	0.60	-2.7
3,954,942	-		DZA65_RS18330	0.60	-0.9
3,954,942	-		DZA65_RS18330	0.60	+0.6
3,954,942	-		DZA65_RS18330	0.60	+1.4
3,954,942	-		DZA65_RS18330	0.60	-0.6
3,954,942	-		DZA65_RS18330	0.60	+1.4
3,955,046	+		DZA65_RS18330	0.65	-0.3
3,955,046	+		DZA65_RS18330	0.65	-0.2
3,955,046	+		DZA65_RS18330	0.65	-1.7
3,955,047	-		DZA65_RS18330	0.65	-0.4
3,955,047	-		DZA65_RS18330	0.65	-1.2
3,955,047	-		DZA65_RS18330	0.65	+1.4
3,955,097	+		DZA65_RS18330	0.67	-0.8
3,955,097	+		DZA65_RS18330	0.67	+0.8
3,955,097	+		DZA65_RS18330	0.67	-1.3
3,955,097	+		DZA65_RS18330	0.67	-0.9
3,955,097	+		DZA65_RS18330	0.67	-1.2
3,955,097	+		DZA65_RS18330	0.67	-0.4
3,955,098	-		DZA65_RS18330	0.68	+0.0
3,955,098	-		DZA65_RS18330	0.68	-1.6
3,955,098	-		DZA65_RS18330	0.68	-0.7
3,955,098	-		DZA65_RS18330	0.68	-0.4
3,955,098	-		DZA65_RS18330	0.68	+0.0
3,955,132	+		DZA65_RS18330	0.69	-1.9
3,955,132	+		DZA65_RS18330	0.69	-1.4
3,955,133	-		DZA65_RS18330	0.69	-1.2
3,955,198	+		DZA65_RS18330	0.73	-0.2
3,955,198	+		DZA65_RS18330	0.73	+1.1
3,955,244	+		DZA65_RS18330	0.75	-0.3
3,955,244	+		DZA65_RS18330	0.75	-2.7
3,955,245	-		DZA65_RS18330	0.75	+2.1
3,955,245	-		DZA65_RS18330	0.75	+1.8
3,955,245	-		DZA65_RS18330	0.75	-1.7
3,955,245	-		DZA65_RS18330	0.75	+0.2
3,955,245	-		DZA65_RS18330	0.75	-0.9
3,955,246	+		DZA65_RS18330	0.75	-1.9
3,955,246	+		DZA65_RS18330	0.75	-1.2
3,955,246	+		DZA65_RS18330	0.75	+0.8
3,955,247	-		DZA65_RS18330	0.75	-0.2
3,955,274	+		DZA65_RS18330	0.77	-1.5
3,955,274	+		DZA65_RS18330	0.77	+1.1
3,955,282	-		DZA65_RS18330	0.77	-0.3
3,955,282	-		DZA65_RS18330	0.77	-1.2
3,955,282	-		DZA65_RS18330	0.77	+1.2
3,955,376	-		DZA65_RS18330	0.82	-1.4
3,955,376	-		DZA65_RS18330	0.82	-0.7
3,955,416	-		DZA65_RS18330	0.84	-2.4
3,955,505	+		DZA65_RS18330	0.88	-0.9
3,955,505	+		DZA65_RS18330	0.88	+0.5
3,955,505	+		DZA65_RS18330	0.88	+1.8
3,955,506	-		DZA65_RS18330	0.88	+2.1
3,955,506	-		DZA65_RS18330	0.88	-1.6
3,955,506	-		DZA65_RS18330	0.88	-1.2
3,955,706	+				-0.3
3,955,706	+				-0.4
3,955,706	+				-1.6
3,955,727	+				+1.4
3,955,727	+				-0.6
3,955,728	-				-0.9
3,955,728	-				-1.0
3,955,784	+				-0.2
3,955,801	-				-1.3
3,955,804	+				-1.0
3,955,805	-				-0.9
3,955,805	-				-1.6
3,955,805	-				-0.1
3,955,805	-				-0.2
3,955,805	-				+2.4
3,955,805	-				-0.6
3,956,093	+		DZA65_RS18335	0.34	+0.8
3,956,094	-		DZA65_RS18335	0.34	-1.0
3,956,179	+		DZA65_RS18335	0.47	-0.2
3,956,179	+		DZA65_RS18335	0.47	-0.7
3,956,179	+		DZA65_RS18335	0.47	+1.9
3,956,179	-		DZA65_RS18335	0.47	-1.7
3,956,180	-		DZA65_RS18335	0.47	-2.3
3,956,180	-		DZA65_RS18335	0.47	+3.2
3,956,180	-		DZA65_RS18335	0.47	-1.2
3,956,180	-		DZA65_RS18335	0.47	-0.4
3,956,400	-		DZA65_RS18335	0.80	-1.6
3,956,439	+		DZA65_RS18335	0.86	-2.1
3,956,439	+		DZA65_RS18335	0.86	+0.8
3,956,439	+		DZA65_RS18335	0.86	-2.2
3,956,439	+		DZA65_RS18335	0.86	+1.4
3,956,439	+		DZA65_RS18335	0.86	-0.4
3,956,440	-		DZA65_RS18335	0.86	+1.6
3,956,440	-		DZA65_RS18335	0.86	-0.6
3,956,440	-		DZA65_RS18335	0.86	+0.4
3,956,440	-		DZA65_RS18335	0.86	-2.3
3,956,503	+				+0.8
3,956,504	-				+1.4
3,956,529	+				+0.2
3,956,551	-				-0.4
3,956,551	-				+0.0
3,956,569	-				-1.0
3,956,582	+				+1.4
3,956,601	+				+0.2
3,956,620	-				-0.6
3,956,620	-				-0.1
3,956,630	-				-0.6
3,956,646	-				+1.4
3,956,646	-				-1.9
3,956,729	+		DZA65_RS18340	0.23	+0.1