Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14995

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
3,272,555	-				-1.5
3,272,575	+				-0.1
3,272,576	-				+2.7
3,272,578	-				+1.2
3,272,590	-				+2.5
3,272,610	-				+0.4
3,272,610	-				-0.4
3,272,652	+				+0.1
3,272,653	-				+0.4
3,272,653	-				+0.1
3,272,678	-				-0.9
3,272,684	+				-0.2
3,272,685	-				+1.1
3,272,744	+				-0.3
3,272,744	+				+1.3
3,272,745	-				+0.3
3,272,745	-				+0.3
3,272,822	-				+0.3
3,272,834	+				-1.7
3,272,838	-				+0.3
3,272,843	+				-0.5
3,272,843	+				-0.4
3,272,844	-				-0.4
3,272,844	-				+0.8
3,272,918	+				-1.2
3,272,919	-				-1.5
3,272,975	+				+2.4
3,272,975	+				+0.6
3,272,981	+				-0.5
3,272,985	+				+1.5
3,272,985	+				-0.2
3,272,986	-				-1.5
3,272,986	-				-1.0
3,272,986	-				+1.5
3,272,986	-				+0.4
3,272,986	-				-0.5
3,272,986	-				+0.3
3,272,990	+				+1.1
3,272,991	-				+0.4
3,272,992	+				+1.6
3,272,992	+				-0.6
3,272,993	-				+0.5
3,273,036	+				-1.4
3,273,037	-				+0.4
3,273,041	-				-2.5
3,273,055	-				-0.7
3,273,153	+				+0.6
3,273,184	-				+1.8
3,273,184	-				+0.2
3,273,186	+				+1.1
3,273,231	-				-2.6
3,273,237	+				+0.2
3,273,258	+				-0.5
3,273,259	-				+2.7
3,273,288	+				+1.3
3,273,288	+				-0.7
3,273,288	+				+0.7
3,273,288	+				-0.2
3,273,289	-				+0.1
3,273,316	+				+0.4
3,273,338	-				-0.2
3,273,343	-				-0.1
3,273,350	+				-1.2
3,273,350	+				+1.6
3,273,351	-				-0.3
3,273,351	-				-2.3
3,273,351	-				+0.4
3,273,351	-				-0.5
3,273,351	-				+1.9
3,273,351	-				+0.1
3,273,456	+				-1.9
3,273,456	+				-2.2
3,273,456	+				-0.1
3,273,456	+				+0.1
3,273,457	-				+0.1
3,273,457	-				+1.7
3,273,457	-				-1.7
3,273,457	-				+2.5
3,273,457	-				-1.6
3,273,461	+				-1.2
3,273,461	+				-0.7
3,273,462	-				-0.2
3,273,493	+				-0.0
3,273,493	+				+1.1
3,273,493	+				+1.1
3,273,493	+				-1.7
3,273,494	-				-0.6
3,273,494	-				+1.0
3,273,494	-				+0.2
3,273,494	-				+0.5
3,273,494	-				-1.5
3,273,498	+				-0.5
3,273,498	+				+0.7
3,273,498	+				-2.4
3,273,499	-				+0.5
3,273,499	-				-0.8
3,273,499	-				+0.1
3,273,499	-				-0.5
3,273,499	-				+0.5
3,273,499	-				+0.8
3,273,499	-				-1.2
3,273,499	-				+0.9
3,273,499	-				+0.9
3,273,499	-				-1.9
3,273,499	-				+0.3
3,273,499	-				-0.5
3,273,499	-				+0.3
3,273,508	-				-0.7
3,273,516	-				-0.4
3,273,516	-				-1.1
3,273,529	-				+0.7
3,273,538	+				-0.6
3,273,551	-				-1.2
3,273,563	+				-0.2
3,273,564	-				-0.5
3,273,595	+				+0.1
3,273,617	+				+0.5
3,273,617	+				-2.5
3,273,618	-				+0.6
3,273,618	-				-0.9
3,273,618	-				+0.1
3,273,651	+				+0.7
3,273,652	-				+0.0
3,273,652	-				+0.4
3,273,652	-				-1.9
3,273,652	-				+0.7
3,273,656	+				+1.4
3,273,656	+				-1.1
3,273,657	-				+1.1
3,273,657	-				+0.1
3,273,754	+		DZA65_RS14995	0.17	-1.5
3,273,776	-		DZA65_RS14995	0.18	+0.4
3,273,847	+		DZA65_RS14995	0.24	+1.1
3,273,847	+		DZA65_RS14995	0.24	+0.5
3,273,847	+		DZA65_RS14995	0.24	-0.5
3,273,847	+		DZA65_RS14995	0.24	-0.3
3,273,847	+		DZA65_RS14995	0.24	-1.1
3,273,847	+		DZA65_RS14995	0.24	-0.5
3,273,847	+		DZA65_RS14995	0.24	+1.3
3,273,847	+		DZA65_RS14995	0.24	-2.2
3,273,847	+		DZA65_RS14995	0.24	-0.5
3,273,847	+		DZA65_RS14995	0.24	+0.1
3,273,847	+		DZA65_RS14995	0.24	+1.0
3,273,847	+		DZA65_RS14995	0.24	+0.5
3,273,847	+		DZA65_RS14995	0.24	+0.3
3,273,848	-		DZA65_RS14995	0.24	-2.1
3,273,848	-		DZA65_RS14995	0.24	+1.5
3,273,848	-		DZA65_RS14995	0.24	+1.3
3,273,848	-		DZA65_RS14995	0.24	+0.3
3,273,848	-		DZA65_RS14995	0.24	+1.3
3,273,848	-		DZA65_RS14995	0.24	+1.1
3,273,848	-		DZA65_RS14995	0.24	+2.9
3,273,848	-		DZA65_RS14995	0.24	+1.1
3,273,848	-		DZA65_RS14995	0.24	+0.2
3,273,848	-		DZA65_RS14995	0.24	-0.9
3,274,042	-		DZA65_RS14995	0.40	-0.4
3,274,073	+		DZA65_RS14995	0.43	-3.0
3,274,074	-		DZA65_RS14995	0.43	-0.4
3,274,074	-		DZA65_RS14995	0.43	+0.7
3,274,086	+		DZA65_RS14995	0.44	-0.6
3,274,105	+		DZA65_RS14995	0.45	-1.5
3,274,105	+		DZA65_RS14995	0.45	-2.1
3,274,105	+		DZA65_RS14995	0.45	-2.6
3,274,106	-		DZA65_RS14995	0.46	-0.5
3,274,106	-		DZA65_RS14995	0.46	-2.8
3,274,111	-				+2.4
3,274,111	-		DZA65_RS14995	0.46	-0.9
3,274,161	+		DZA65_RS14995	0.50	+1.4
3,274,161	+		DZA65_RS14995	0.50	-1.5
3,274,162	-		DZA65_RS14995	0.50	+0.4
3,274,181	-		DZA65_RS14995	0.52	-1.5
3,274,181	-		DZA65_RS14995	0.52	+0.1
3,274,195	+		DZA65_RS14995	0.53	+0.3
3,274,195	+		DZA65_RS14995	0.53	+2.7
3,274,195	+		DZA65_RS14995	0.53	+1.7
3,274,196	-		DZA65_RS14995	0.53	+1.0
3,274,218	+		DZA65_RS14995	0.55	-1.2
3,274,218	+		DZA65_RS14995	0.55	-0.1
3,274,219	-		DZA65_RS14995	0.55	-1.7
3,274,241	+		DZA65_RS14995	0.57	+0.4
3,274,241	+		DZA65_RS14995	0.57	-0.2
3,274,241	+		DZA65_RS14995	0.57	+0.8
3,274,241	+		DZA65_RS14995	0.57	-1.7
3,274,241	+		DZA65_RS14995	0.57	-0.1
3,274,242	-		DZA65_RS14995	0.57	-0.9
3,274,242	-		DZA65_RS14995	0.57	+0.5
3,274,242	-		DZA65_RS14995	0.57	-0.4
3,274,242	-		DZA65_RS14995	0.57	+0.1
3,274,242	-		DZA65_RS14995	0.57	-1.3
3,274,242	-		DZA65_RS14995	0.57	-1.3
3,274,242	-		DZA65_RS14995	0.57	-0.1
3,274,242	-		DZA65_RS14995	0.57	+0.7
3,274,244	+		DZA65_RS14995	0.57	+0.7
3,274,342	+		DZA65_RS14995	0.65	-0.5
3,274,343	-		DZA65_RS14995	0.65	-1.6
3,274,471	+		DZA65_RS14995	0.76	-1.1
3,274,471	+		DZA65_RS14995	0.76	+0.7
3,274,471	+		DZA65_RS14995	0.76	-0.5
3,274,472	-		DZA65_RS14995	0.76	-2.9
3,274,472	-		DZA65_RS14995	0.76	-2.2
3,274,472	-		DZA65_RS14995	0.76	-0.1
3,274,472	-		DZA65_RS14995	0.76	-0.5
3,274,472	-		DZA65_RS14995	0.76	-1.7
3,274,472	-		DZA65_RS14995	0.76	-0.1
3,274,472	-		DZA65_RS14995	0.76	-2.1
3,274,483	-		DZA65_RS14995	0.77	+0.3
3,274,549	+		DZA65_RS14995	0.82	+0.1
3,274,549	+		DZA65_RS14995	0.82	+0.1
3,274,549	+		DZA65_RS14995	0.82	+0.8
3,274,549	+		DZA65_RS14995	0.82	-1.1
3,274,549	+		DZA65_RS14995	0.82	-1.5
3,274,550	-		DZA65_RS14995	0.82	-0.5
3,274,550	-		DZA65_RS14995	0.82	-0.9
3,274,550	-		DZA65_RS14995	0.82	+0.5
3,274,550	-		DZA65_RS14995	0.82	-0.5
3,274,550	-		DZA65_RS14995	0.82	-2.5
3,274,550	-		DZA65_RS14995	0.82	-0.5
3,274,550	-		DZA65_RS14995	0.82	-1.0
3,274,550	-		DZA65_RS14995	0.82	-1.3
3,274,585	-		DZA65_RS14995	0.85	-0.5
3,274,608	-		DZA65_RS14995	0.87	-0.9
3,274,634	+		DZA65_RS14995	0.89	-2.3
3,274,634	+		DZA65_RS14995	0.89	-1.7
3,274,635	-		DZA65_RS14995	0.89	+0.1
3,274,635	-		DZA65_RS14995	0.89	-0.3
3,274,687	-				-1.0
3,274,765	+				-3.1
3,274,866	-				+0.7
3,274,882	+				+0.1
3,274,882	+				-1.0
3,274,882	+				+1.0
3,274,883	-				+1.1
3,274,883	-				-1.7
3,274,898	+				+0.5
3,274,898	+				-2.2
3,274,898	+				+0.4
3,274,899	-				+1.1
3,274,899	-				-0.9
3,274,899	-				+0.3
3,274,899	-				-0.2
3,274,899	-				-1.7
3,274,914	+				-2.1
3,274,914	+				+0.6
3,274,914	+				+0.1
3,274,914	+				-1.6
3,274,914	+				+1.1
3,274,914	+				-1.1
3,274,914	+				-2.0
3,274,914	+				-1.2
3,274,915	-				-0.9
3,274,915	-				-4.2
3,274,915	-				+0.1
3,274,915	-				-1.2
3,274,915	-				-0.4
3,274,915	-				+0.5
3,274,915	-				+1.3
3,274,915	-				+2.1
3,274,915	-				+0.3
3,274,915	-				-2.3
3,274,963	-				-2.2
3,275,113	+		DZA65_RS15000	0.33	-2.5
3,275,113	+		DZA65_RS15000	0.33	-0.9
3,275,113	+		DZA65_RS15000	0.33	-3.4
3,275,113	+		DZA65_RS15000	0.33	-0.2
3,275,113	+		DZA65_RS15000	0.33	-1.2
3,275,113	+		DZA65_RS15000	0.33	-0.7
3,275,113	+		DZA65_RS15000	0.33	+1.8
3,275,113	+		DZA65_RS15000	0.33	+0.5
3,275,113	+		DZA65_RS15000	0.33	-0.7
3,275,113	+		DZA65_RS15000	0.33	+0.1
3,275,113	+		DZA65_RS15000	0.33	-2.6
3,275,114	-		DZA65_RS15000	0.33	+0.3
3,275,114	-		DZA65_RS15000	0.33	-3.0
3,275,114	-		DZA65_RS15000	0.33	-1.2
3,275,114	-		DZA65_RS15000	0.33	+1.1
3,275,114	-		DZA65_RS15000	0.33	+0.2
3,275,114	-		DZA65_RS15000	0.33	-1.7
3,275,114	-		DZA65_RS15000	0.33	-0.1
3,275,114	-		DZA65_RS15000	0.33	-1.2
3,275,114	-		DZA65_RS15000	0.33	-0.2
3,275,165	-		DZA65_RS15000	0.42	+1.1
3,275,165	-		DZA65_RS15000	0.42	-1.5
3,275,167	+		DZA65_RS15000	0.42	-1.1
3,275,167	+		DZA65_RS15000	0.42	-1.5
3,275,167	+		DZA65_RS15000	0.42	+1.8
3,275,167	+		DZA65_RS15000	0.42	+0.8
3,275,191	+		DZA65_RS15000	0.46	-1.6
3,275,191	+		DZA65_RS15000	0.46	-1.0
3,275,192	-		DZA65_RS15000	0.46	-2.6
3,275,249	+		DZA65_RS15000	0.56	-0.5
3,275,249	+				-1.5
3,275,249	+		DZA65_RS15000	0.56	+0.2
3,275,249	+		DZA65_RS15000	0.56	-0.5
3,275,286	+		DZA65_RS15000	0.62	+1.3
3,275,371	-		DZA65_RS15000	0.76	-0.5
3,275,443	+		DZA65_RS15000	0.88	+0.3
3,275,444	-		DZA65_RS15000	0.88	-1.6
3,275,460	+				-0.7
3,275,460	+				+0.1
3,275,461	-				-0.2
3,275,538	+				+1.1
3,275,538	+				-0.5
3,275,538	+				-2.5
3,275,538	+				+0.5
3,275,539	-				-0.3
3,275,539	-				+0.7
3,275,572	+				-2.2
3,275,572	+				+1.1
3,275,572	+				+0.2
3,275,572	+				-1.9
3,275,572	+				-1.0
3,275,572	+				-0.5
3,275,573	-				+0.1
3,275,573	-				+0.2
3,275,573	-				-1.2
3,275,573	-				-3.1
3,275,628	+				+2.2
3,275,691	+				-1.5
3,275,696	+				-0.7
3,275,696	+				+0.1
3,275,696	+				+1.6
3,275,696	+				+0.5
3,275,696	+				+1.2
3,275,697	-				-1.5
3,275,697	-				-1.1
3,275,724	-				+0.4