Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14990

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
3,270,755	-				-2.1
3,270,774	-				-1.7
3,270,794	-				-0.6
3,270,804	-				-1.4
3,270,841	-				-1.8
3,270,841	-				+0.3
3,270,873	+				-1.7
3,270,874	-				+0.7
3,270,874	-				+0.1
3,270,886	-				-2.5
3,270,939	+				-1.7
3,270,950	+				-1.5
3,270,950	+				-1.7
3,270,951	-				-0.2
3,270,951	-				+1.7
3,270,951	-				-1.2
3,270,951	-				-0.3
3,270,955	-				-0.1
3,270,955	-				-0.3
3,270,955	-				-2.2
3,270,955	-				-2.2
3,270,994	+				+0.8
3,270,998	-				-1.2
3,271,035	+				-0.7
3,271,035	+				+1.1
3,271,035	+				-0.3
3,271,035	+				+1.8
3,271,036	-				-2.3
3,271,036	-				-0.4
3,271,041	-				+0.2
3,271,184	+				-0.2
3,271,184	+				-1.7
3,271,184	+				-0.5
3,271,184	+				-0.3
3,271,185	-				+1.6
3,271,212	+				-1.8
3,271,212	+				-0.3
3,271,212	+				+1.4
3,271,212	+				-1.2
3,271,212	+				-0.2
3,271,213	-				-2.4
3,271,213	-				-0.2
3,271,213	-				+0.1
3,271,213	-				-0.9
3,271,213	-				+0.4
3,271,272	+				-0.9
3,271,273	-				+0.1
3,271,273	-				-1.4
3,271,289	-				-1.5
3,271,289	-				-2.1
3,271,289	-				-2.5
3,271,291	+				-1.9
3,271,291	+				+1.1
3,271,292	-				-1.7
3,271,292	-				-1.5
3,271,292	-				-1.2
3,271,298	+				-1.9
3,271,306	+				+0.1
3,271,306	+				-1.2
3,271,396	+		DZA65_RS14990	0.12	+0.7
3,271,397	-		DZA65_RS14990	0.12	-0.2
3,271,440	+		DZA65_RS14990	0.17	-1.2
3,271,440	+		DZA65_RS14990	0.17	-1.5
3,271,440	+		DZA65_RS14990	0.17	+0.9
3,271,440	+		DZA65_RS14990	0.17	-0.9
3,271,440	+		DZA65_RS14990	0.17	-1.7
3,271,440	+		DZA65_RS14990	0.17	-1.7
3,271,440	+		DZA65_RS14990	0.17	-0.8
3,271,440	+		DZA65_RS14990	0.17	-1.5
3,271,441	-		DZA65_RS14990	0.17	-0.2
3,271,441	-		DZA65_RS14990	0.17	-1.2
3,271,441	-		DZA65_RS14990	0.17	+1.5
3,271,441	-		DZA65_RS14990	0.17	-1.9
3,271,441	-		DZA65_RS14990	0.17	-0.6
3,271,441	-		DZA65_RS14990	0.17	-1.5
3,271,441	-		DZA65_RS14990	0.17	-1.2
3,271,443	+		DZA65_RS14990	0.17	-1.5
3,271,548	-		DZA65_RS14990	0.28	+0.8
3,271,584	+		DZA65_RS14990	0.32	-0.5
3,271,584	+		DZA65_RS14990	0.32	-1.4
3,271,585	-		DZA65_RS14990	0.32	-0.3
3,271,585	-		DZA65_RS14990	0.32	-0.5
3,271,585	-		DZA65_RS14990	0.32	-0.5
3,271,616	-		DZA65_RS14990	0.35	-1.2
3,271,616	-		DZA65_RS14990	0.35	-1.7
3,271,774	+		DZA65_RS14990	0.52	-0.3
3,271,781	+		DZA65_RS14990	0.52	-2.3
3,271,782	-		DZA65_RS14990	0.52	-1.7
3,271,782	-		DZA65_RS14990	0.52	-1.6
3,271,807	+		DZA65_RS14990	0.55	-1.2
3,271,807	+		DZA65_RS14990	0.55	-1.7
3,271,807	+		DZA65_RS14990	0.55	+0.1
3,271,807	+		DZA65_RS14990	0.55	-2.1
3,271,808	-		DZA65_RS14990	0.55	-1.7
3,271,855	+		DZA65_RS14990	0.60	-2.5
3,271,855	+		DZA65_RS14990	0.60	-2.3
3,271,855	+		DZA65_RS14990	0.60	+0.8
3,271,909	+		DZA65_RS14990	0.66	-0.2
3,271,945	+		DZA65_RS14990	0.70	-0.5
3,271,951	+		DZA65_RS14990	0.70	-0.2
3,271,951	+		DZA65_RS14990	0.70	-0.1
3,271,953	+		DZA65_RS14990	0.70	+0.7
3,271,953	+		DZA65_RS14990	0.70	+0.4
3,271,953	+		DZA65_RS14990	0.70	+0.4
3,271,953	+		DZA65_RS14990	0.70	-0.5
3,271,953	+		DZA65_RS14990	0.70	+0.5
3,271,954	-		DZA65_RS14990	0.71	-0.5
3,271,954	-		DZA65_RS14990	0.71	+0.7
3,271,954	-		DZA65_RS14990	0.71	+0.1
3,271,954	-		DZA65_RS14990	0.71	-1.2
3,271,954	-		DZA65_RS14990	0.71	+0.7
3,271,954	-		DZA65_RS14990	0.71	-1.2
3,271,954	-		DZA65_RS14990	0.71	-0.1
3,271,954	-		DZA65_RS14990	0.71	+2.1
3,272,224	+				-1.5
3,272,224	+				-0.5
3,272,224	+				-0.3
3,272,225	-				-1.5
3,272,247	+				-1.6
3,272,247	+				-1.3
3,272,247	+				+0.5
3,272,248	-				+0.3
3,272,252	-				+0.6
3,272,252	-				+0.7
3,272,252	-				-1.3
3,272,252	-				-2.6
3,272,272	+				+1.1
3,272,272	+				-1.9
3,272,273	-				-1.4
3,272,273	-				-1.9
3,272,273	-				+1.0
3,272,273	-				+0.4
3,272,273	-				-0.5
3,272,273	-				-1.0
3,272,273	-				-2.3
3,272,317	+				-0.9
3,272,318	-				+1.4
3,272,318	-				+1.5
3,272,318	-				+1.1
3,272,366	-				+0.1
3,272,410	-				+0.4
3,272,418	+				-2.1
3,272,422	-				-0.0
3,272,426	-				-2.1
3,272,452	+				-1.2
3,272,462	-				-1.9
3,272,465	+				+0.1
3,272,466	-				-1.3
3,272,550	-				-1.7
3,272,555	-				-1.5
3,272,575	+				-0.1
3,272,576	-				+2.7
3,272,578	-				+1.2
3,272,590	-				+2.5
3,272,610	-				+0.4
3,272,610	-				-0.4
3,272,652	+				+0.1
3,272,653	-				+0.4
3,272,653	-				+0.1
3,272,678	-				-0.9
3,272,684	+				-0.2
3,272,685	-				+1.1
3,272,744	+				-0.3
3,272,744	+				+1.3
3,272,745	-				+0.3
3,272,745	-				+0.3
3,272,822	-				+0.3
3,272,834	+				-1.7
3,272,838	-				+0.3
3,272,843	+				-0.5
3,272,843	+				-0.4
3,272,844	-				-0.4
3,272,844	-				+0.8
3,272,918	+				-1.2
3,272,919	-				-1.5
3,272,975	+				+2.4
3,272,975	+				+0.6
3,272,981	+				-0.5
3,272,985	+				+1.5
3,272,985	+				-0.2
3,272,986	-				-1.5
3,272,986	-				-1.0
3,272,986	-				+1.5
3,272,986	-				+0.4
3,272,986	-				-0.5
3,272,986	-				+0.3
3,272,990	+				+1.1
3,272,991	-				+0.4
3,272,992	+				+1.6
3,272,992	+				-0.6
3,272,993	-				+0.5
3,273,036	+				-1.4
3,273,037	-				+0.4
3,273,041	-				-2.5
3,273,055	-				-0.7
3,273,153	+				+0.6
3,273,184	-				+1.8
3,273,184	-				+0.2
3,273,186	+				+1.1
3,273,231	-				-2.6