Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13905

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
2,987,023	+				-1.9
2,987,024	-				-3.4
2,987,031	+				-3.2
2,987,031	+				-1.5
2,987,031	+				-2.6
2,987,031	+				-2.2
2,987,031	+				-2.1
2,987,031	+				-1.2
2,987,032	-				-1.8
2,987,032	-				-1.2
2,987,032	-				-2.1
2,987,032	-				-0.5
2,987,032	-				-0.5
2,987,046	+				-3.4
2,987,047	-				-3.0
2,987,047	-				-1.7
2,987,066	+				-1.2
2,987,067	-				-2.1
2,987,067	-				-2.8
2,987,076	+				-2.7
2,987,107	-				-2.1
2,987,142	+		DZA65_RS13900	0.11	-2.5
2,987,224	+		DZA65_RS13900	0.19	-2.4
2,987,224	+		DZA65_RS13900	0.19	-4.2
2,987,224	+		DZA65_RS13900	0.19	-2.7
2,987,224	+		DZA65_RS13900	0.19	-1.7
2,987,225	-		DZA65_RS13900	0.19	-0.4
2,987,255	-		DZA65_RS13900	0.22	-1.7
2,987,255	-		DZA65_RS13900	0.22	-0.5
2,987,316	+		DZA65_RS13900	0.29	-0.5
2,987,316	+		DZA65_RS13900	0.29	-0.9
2,987,316	+		DZA65_RS13900	0.29	-1.6
2,987,317	-		DZA65_RS13900	0.29	-0.5
2,987,317	-		DZA65_RS13900	0.29	-0.5
2,987,415	+		DZA65_RS13900	0.39	-3.2
2,987,416	-		DZA65_RS13900	0.39	-2.1
2,987,460	+		DZA65_RS13900	0.43	-1.5
2,987,490	+		DZA65_RS13900	0.46	-1.8
2,987,619	+		DZA65_RS13900	0.59	-3.3
2,987,620	-		DZA65_RS13900	0.59	-1.9
2,987,620	-		DZA65_RS13900	0.59	-0.5
2,987,902	-		DZA65_RS13900	0.88	-2.5
2,987,915	+		DZA65_RS13900	0.89	-1.2
2,987,916	-		DZA65_RS13900	0.89	-0.2
2,987,919	+		DZA65_RS13900	0.89	-3.0
2,987,919	+		DZA65_RS13900	0.89	-1.2
2,987,919	+		DZA65_RS13900	0.89	-3.1
2,987,919	+		DZA65_RS13900	0.89	-1.5
2,987,919	+		DZA65_RS13900	0.89	-0.5
2,987,919	+		DZA65_RS13900	0.89	-0.1
2,987,919	+		DZA65_RS13900	0.89	-2.9
2,987,919	+		DZA65_RS13900	0.89	-1.5
2,987,919	+		DZA65_RS13900	0.89	-3.8
2,987,919	+		DZA65_RS13900	0.89	-1.9
2,987,919	+		DZA65_RS13900	0.89	-0.9
2,987,919	+		DZA65_RS13900	0.89	-1.7
2,987,919	+		DZA65_RS13900	0.89	-2.5
2,987,919	+		DZA65_RS13900	0.89	-1.7
2,987,919	+		DZA65_RS13900	0.89	-3.1
2,987,920	-		DZA65_RS13900	0.89	-1.5
2,987,920	-		DZA65_RS13900	0.89	-3.0
2,987,920	-		DZA65_RS13900	0.89	-2.9
2,987,920	-		DZA65_RS13900	0.89	-1.7
2,987,920	-		DZA65_RS13900	0.89	-2.8
2,987,920	-		DZA65_RS13900	0.89	-2.6
2,987,920	-		DZA65_RS13900	0.89	-1.6
2,987,920	-		DZA65_RS13900	0.89	-1.5
2,987,920	-		DZA65_RS13900	0.89	-1.2
2,987,920	-		DZA65_RS13900	0.89	-0.9
2,987,920	-		DZA65_RS13900	0.89	-1.4
2,987,920	-		DZA65_RS13900	0.89	-3.3
2,987,920	-		DZA65_RS13900	0.89	-3.7
2,987,920	-		DZA65_RS13900	0.89	-2.1
2,987,920	-		DZA65_RS13900	0.89	-2.2
2,987,920	-		DZA65_RS13900	0.89	-2.8
2,987,920	-		DZA65_RS13900	0.89	-1.6
2,987,920	-		DZA65_RS13900	0.89	-2.7
2,987,920	-		DZA65_RS13900	0.89	-3.5
2,987,920	-		DZA65_RS13900	0.89	-3.2
2,987,920	-		DZA65_RS13900	0.89	-2.9
2,987,920	-		DZA65_RS13900	0.89	-1.2
2,987,920	-		DZA65_RS13900	0.89	-1.7
2,987,920	-		DZA65_RS13900	0.89	-2.1
2,987,920	-		DZA65_RS13900	0.89	-3.4
2,987,920	-		DZA65_RS13900	0.89	-2.1
2,987,920	-		DZA65_RS13900	0.89	-2.9
2,987,920	-		DZA65_RS13900	0.89	-2.5
2,987,920	-		DZA65_RS13900	0.89	-2.4
2,987,920	-		DZA65_RS13900	0.89	-2.8
2,987,920	-		DZA65_RS13900	0.89	-2.1
2,987,920	-		DZA65_RS13900	0.89	-3.7
2,987,920	-		DZA65_RS13900	0.89	-2.8
2,987,963	+				-1.9
2,987,963	+				-3.2
2,987,963	+				-1.6
2,987,963	+				-2.8
2,987,963	+				-1.6
2,987,963	+				+0.1
2,987,963	+				-1.2
2,987,963	+				-2.1
2,987,963	+				-0.3
2,987,963	+				-2.2
2,987,964	-				-3.9
2,987,964	-				-1.9
2,987,964	-				-2.1
2,987,964	-				-0.5
2,987,964	-				+1.2
2,987,964	-				-0.5
2,987,964	-				-2.4
2,987,964	-				-0.5
2,987,964	-				-1.5
2,987,964	-				-1.9
2,987,964	-				-0.9
2,987,964	-				-1.5
2,987,994	+				-1.8
2,987,994	+				-0.2
2,987,995	-				-1.5
2,988,023	-				-4.0
2,988,023	-				-3.5
2,988,219	+		DZA65_RS13905	0.27	-0.5
2,988,219	+		DZA65_RS13905	0.27	-1.2
2,988,219	+		DZA65_RS13905	0.27	-3.3
2,988,220	-		DZA65_RS13905	0.28	-2.5
2,988,220	-		DZA65_RS13905	0.28	-3.7
2,988,269	+		DZA65_RS13905	0.34	-3.4
2,988,318	+		DZA65_RS13905	0.41	-3.5
2,988,318	+		DZA65_RS13905	0.41	-1.8
2,988,318	+		DZA65_RS13905	0.41	-1.9
2,988,319	-		DZA65_RS13905	0.41	-2.3
2,988,413	-		DZA65_RS13905	0.54	-3.8
2,988,496	-		DZA65_RS13905	0.65	-3.4
2,988,496	-		DZA65_RS13905	0.65	-1.5
2,988,507	+		DZA65_RS13905	0.66	-4.0
2,988,507	+		DZA65_RS13905	0.66	-3.0
2,988,507	+		DZA65_RS13905	0.66	-0.9
2,988,507	+		DZA65_RS13905	0.66	-0.9
2,988,508	-		DZA65_RS13905	0.67	-1.7
2,988,508	-		DZA65_RS13905	0.67	-2.8
2,988,508	-				-1.7
2,988,508	-		DZA65_RS13905	0.67	-2.4
2,988,508	-		DZA65_RS13905	0.67	-2.9
2,988,508	-		DZA65_RS13905	0.67	-4.1
2,988,508	-		DZA65_RS13905	0.67	-1.4
2,988,508	-		DZA65_RS13905	0.67	-3.7
2,988,508	-		DZA65_RS13905	0.67	-0.2
2,988,561	+		DZA65_RS13905	0.74	-1.9
2,988,561	+		DZA65_RS13905	0.74	-3.3
2,988,561	+		DZA65_RS13905	0.74	-1.7
2,988,561	+		DZA65_RS13905	0.74	-1.7
2,988,561	+		DZA65_RS13905	0.74	-4.9
2,988,562	-		DZA65_RS13905	0.74	-1.9
2,988,562	-		DZA65_RS13905	0.74	-4.4
2,988,562	-		DZA65_RS13905	0.74	-2.1
2,988,562	-		DZA65_RS13905	0.74	-2.4
2,988,562	-		DZA65_RS13905	0.74	-1.5
2,988,562	-		DZA65_RS13905	0.74	-2.0
2,988,562	-		DZA65_RS13905	0.74	-0.9
2,988,562	-		DZA65_RS13905	0.74	-2.7
2,988,605	-		DZA65_RS13905	0.80	-1.9
2,988,611	-		DZA65_RS13905	0.80	-2.2
2,988,786	+				-1.7
2,988,786	+				-1.7
2,988,786	+				-3.7
2,988,786	+				-1.7
2,988,786	+				-1.8
2,988,786	+				-2.6
2,988,786	+				-0.7
2,988,786	+				-2.8
2,988,786	+				-2.1
2,988,787	-				+1.1
2,988,787	-				-1.5
2,988,787	-				-2.0
2,988,787	-				-1.5
2,988,787	-				-2.6
2,988,787	-				-2.2
2,988,787	-				-0.5
2,988,816	+				-1.7
2,988,827	+				-4.2
2,988,828	-				-2.8
2,988,835	+				-3.5
2,988,888	+				-2.8
2,988,888	+				-1.2
2,988,888	+				-3.9
2,988,888	+				-1.5
2,988,889	-				-1.7
2,988,947	+		DZA65_RS13910	0.14	-2.7
2,988,947	+		DZA65_RS13910	0.14	-2.2
2,988,947	+		DZA65_RS13910	0.14	-1.2
2,988,948	-		DZA65_RS13910	0.14	-3.5
2,988,948	-		DZA65_RS13910	0.14	+1.4
2,988,948	-		DZA65_RS13910	0.14	+0.1
2,988,948	-		DZA65_RS13910	0.14	-0.5
2,988,948	-		DZA65_RS13910	0.14	-4.1
2,988,991	-		DZA65_RS13910	0.17	-2.1
2,988,991	-		DZA65_RS13910	0.17	-1.9
2,989,036	+		DZA65_RS13910	0.21	-3.2
2,989,037	-		DZA65_RS13910	0.21	-2.8
2,989,079	+		DZA65_RS13910	0.24	-1.2
2,989,080	-		DZA65_RS13910	0.24	-2.4
2,989,133	+		DZA65_RS13910	0.28	-3.4
2,989,133	+		DZA65_RS13910	0.28	+0.1
2,989,134	-		DZA65_RS13910	0.28	+1.1
2,989,134	-		DZA65_RS13910	0.28	-1.2
2,989,206	+		DZA65_RS13910	0.33	-0.9
2,989,207	-		DZA65_RS13910	0.33	-1.7
2,989,207	-		DZA65_RS13910	0.33	+0.1
2,989,207	-		DZA65_RS13910	0.33	-3.0
2,989,281	+		DZA65_RS13910	0.38	-1.9
2,989,281	+		DZA65_RS13910	0.38	-1.2
2,989,281	+		DZA65_RS13910	0.38	-2.6
2,989,281	+		DZA65_RS13910	0.38	-2.1
2,989,282	-		DZA65_RS13910	0.39	-1.9
2,989,282	-		DZA65_RS13910	0.39	-2.2
2,989,282	-		DZA65_RS13910	0.39	-1.9
2,989,311	+		DZA65_RS13910	0.41	-0.9
2,989,312	-		DZA65_RS13910	0.41	-0.5
2,989,312	-		DZA65_RS13910	0.41	-0.5
2,989,312	-		DZA65_RS13910	0.41	-2.2
2,989,343	-		DZA65_RS13910	0.43	+0.5
2,989,344	+		DZA65_RS13910	0.43	-2.0
2,989,344	+		DZA65_RS13910	0.43	-2.9
2,989,344	+		DZA65_RS13910	0.43	-2.1
2,989,345	-		DZA65_RS13910	0.43	-3.1
2,989,345	-		DZA65_RS13910	0.43	-1.2
2,989,358	+		DZA65_RS13910	0.44	-0.2
2,989,358	+		DZA65_RS13910	0.44	-1.5
2,989,358	+		DZA65_RS13910	0.44	-3.8
2,989,358	+		DZA65_RS13910	0.44	-2.9
2,989,358	+		DZA65_RS13910	0.44	-1.7
2,989,358	+		DZA65_RS13910	0.44	-2.9
2,989,358	+		DZA65_RS13910	0.44	-2.6
2,989,358	+		DZA65_RS13910	0.44	-2.8
2,989,358	+		DZA65_RS13910	0.44	+1.1
2,989,358	+		DZA65_RS13910	0.44	-0.8
2,989,358	+		DZA65_RS13910	0.44	+0.9
2,989,358	+		DZA65_RS13910	0.44	-2.6
2,989,359	-		DZA65_RS13910	0.44	-2.7
2,989,359	-		DZA65_RS13910	0.44	-4.4
2,989,359	-		DZA65_RS13910	0.44	-2.7
2,989,359	-		DZA65_RS13910	0.44	-3.5
2,989,359	-		DZA65_RS13910	0.44	-0.1
2,989,364	+		DZA65_RS13910	0.44	-3.0
2,989,364	+		DZA65_RS13910	0.44	-3.2
2,989,364	+		DZA65_RS13910	0.44	-3.0
2,989,364	+		DZA65_RS13910	0.44	+0.5
2,989,364	+		DZA65_RS13910	0.44	-3.5
2,989,365	-		DZA65_RS13910	0.45	-4.6
2,989,365	-		DZA65_RS13910	0.45	-2.2
2,989,365	-		DZA65_RS13910	0.45	-2.2
2,989,365	-		DZA65_RS13910	0.45	-0.5
2,989,488	+		DZA65_RS13910	0.54	-2.1
2,989,489	-		DZA65_RS13910	0.54	-3.7
2,989,504	+		DZA65_RS13910	0.55	-1.2
2,989,504	+		DZA65_RS13910	0.55	-2.1
2,989,504	+		DZA65_RS13910	0.55	-3.1
2,989,505	-		DZA65_RS13910	0.55	-3.0
2,989,505	-		DZA65_RS13910	0.55	-2.9
2,989,509	+		DZA65_RS13910	0.55	-3.4
2,989,509	+		DZA65_RS13910	0.55	-0.9
2,989,550	+		DZA65_RS13910	0.58	-1.5
2,989,550	+		DZA65_RS13910	0.58	-1.7
2,989,550	+		DZA65_RS13910	0.58	-1.7
2,989,550	+		DZA65_RS13910	0.58	-0.5
2,989,550	+		DZA65_RS13910	0.58	-2.3
2,989,550	+		DZA65_RS13910	0.58	-1.5
2,989,550	+		DZA65_RS13910	0.58	-2.7
2,989,550	+		DZA65_RS13910	0.58	-2.9
2,989,550	+		DZA65_RS13910	0.58	-1.7
2,989,550	+		DZA65_RS13910	0.58	-2.7
2,989,550	+		DZA65_RS13910	0.58	-0.5
2,989,550	+		DZA65_RS13910	0.58	-0.5
2,989,550	+		DZA65_RS13910	0.58	-2.6
2,989,550	+		DZA65_RS13910	0.58	-1.5
2,989,550	+		DZA65_RS13910	0.58	-1.9
2,989,550	+		DZA65_RS13910	0.58	-0.9
2,989,550	+		DZA65_RS13910	0.58	-0.5
2,989,550	+		DZA65_RS13910	0.58	-2.7
2,989,551	-		DZA65_RS13910	0.58	-2.1
2,989,551	-		DZA65_RS13910	0.58	-2.1
2,989,551	-		DZA65_RS13910	0.58	-2.6
2,989,551	-		DZA65_RS13910	0.58	-2.4
2,989,551	-		DZA65_RS13910	0.58	-0.9
2,989,551	-		DZA65_RS13910	0.58	-2.8
2,989,551	-		DZA65_RS13910	0.58	-1.6
2,989,551	-		DZA65_RS13910	0.58	-1.2
2,989,551	-		DZA65_RS13910	0.58	-2.9
2,989,551	-		DZA65_RS13910	0.58	-1.7
2,989,551	-		DZA65_RS13910	0.58	-1.2
2,989,551	-		DZA65_RS13910	0.58	-1.7
2,989,551	-		DZA65_RS13910	0.58	-3.4
2,989,551	-		DZA65_RS13910	0.58	-2.5
2,989,551	-		DZA65_RS13910	0.58	-3.7
2,989,561	-		DZA65_RS13910	0.59	-1.5
2,989,561	-		DZA65_RS13910	0.59	-1.7
2,989,561	-		DZA65_RS13910	0.59	-0.9
2,989,579	+		DZA65_RS13910	0.60	-1.5
2,989,579	+		DZA65_RS13910	0.60	-0.9
2,989,580	-		DZA65_RS13910	0.60	-1.9
2,989,580	-		DZA65_RS13910	0.60	-3.4
2,989,580	-		DZA65_RS13910	0.60	-3.7
2,989,580	-		DZA65_RS13910	0.60	-3.2
2,989,580	-		DZA65_RS13910	0.60	-1.9
2,989,676	+		DZA65_RS13910	0.67	-0.7
2,989,676	+		DZA65_RS13910	0.67	-1.5
2,989,695	+		DZA65_RS13910	0.69	-1.7
2,989,695	+		DZA65_RS13910	0.69	-2.9
2,989,695	+		DZA65_RS13910	0.69	-1.2
2,989,696	-		DZA65_RS13910	0.69	-0.9
2,989,696	-		DZA65_RS13910	0.69	-1.2
2,989,696	-		DZA65_RS13910	0.69	-2.2
2,989,726	+		DZA65_RS13910	0.71	-3.0
2,989,726	+		DZA65_RS13910	0.71	-1.0
2,989,726	+		DZA65_RS13910	0.71	+0.1
2,989,726	+		DZA65_RS13910	0.71	-3.7
2,989,728	+		DZA65_RS13910	0.71	-2.8
2,989,729	-		DZA65_RS13910	0.71	-2.6
2,989,729	-		DZA65_RS13910	0.71	-4.2
2,989,729	-		DZA65_RS13910	0.71	-2.1
2,989,729	-		DZA65_RS13910	0.71	-2.1
2,989,729	-		DZA65_RS13910	0.71	-2.2