Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11280

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
2,395,958	-				+0.9
2,395,958	-				-3.7
2,395,981	+				-0.1
2,395,982	-				-1.9
2,396,033	+				+0.5
2,396,063	+				-1.9
2,396,069	+				+0.2
2,396,082	+				-1.1
2,396,082	+				+0.5
2,396,083	-				-1.7
2,396,083	-				-1.9
2,396,099	+				+0.2
2,396,100	-				-0.7
2,396,114	+				+0.0
2,396,115	-				-0.9
2,396,115	-				-0.4
2,396,115	-				-2.4
2,396,155	+				-1.7
2,396,155	+				-1.1
2,396,156	-				-1.7
2,396,156	-				-1.7
2,396,174	+				-0.7
2,396,187	-				-1.0
2,396,187	-				+0.3
2,396,192	+				-1.1
2,396,193	-				-1.1
2,396,193	-				+0.6
2,396,193	-				-0.3
2,396,263	+				-0.3
2,396,263	+				-1.1
2,396,263	+				+1.8
2,396,318	+				+0.5
2,396,318	+				-1.4
2,396,318	+				+0.6
2,396,319	-				+0.5
2,396,322	+				-1.1
2,396,322	+				+1.9
2,396,322	+				+0.5
2,396,322	+				+0.3
2,396,323	-				-1.0
2,396,323	-				+0.9
2,396,323	-				+1.2
2,396,323	-				+1.5
2,396,346	+				+0.5
2,396,347	-				+1.3
2,396,355	+				-1.3
2,396,417	+				+0.3
2,396,417	+				+0.6
2,396,492	+				-2.3
2,396,492	+				-1.1
2,396,506	+				-1.4
2,396,506	+				+0.9
2,396,506	+				-0.4
2,396,507	-				+0.2
2,396,507	-				+1.1
2,396,512	+				+0.1
2,396,513	-				-1.1
2,396,513	-				-0.9
2,396,563	+		DZA65_RS11275	0.14	-1.2
2,396,612	+		DZA65_RS11275	0.24	-0.8
2,396,613	-		DZA65_RS11275	0.25	-1.0
2,397,075	-				-0.5
2,397,075	-				-1.3
2,397,107	-				-0.7
2,397,167	+		DZA65_RS11280	0.12	+1.2
2,397,167	+		DZA65_RS11280	0.12	-0.7
2,397,238	+		DZA65_RS11280	0.15	-1.4
2,397,253	+		DZA65_RS11280	0.16	-0.1
2,397,288	+		DZA65_RS11280	0.18	-1.1
2,397,288	+		DZA65_RS11280	0.18	-2.0
2,397,288	+		DZA65_RS11280	0.18	-1.4
2,397,289	-		DZA65_RS11280	0.18	+1.1
2,397,292	+		DZA65_RS11280	0.18	+0.9
2,397,292	+		DZA65_RS11280	0.18	+1.4
2,397,292	+		DZA65_RS11280	0.18	-1.4
2,397,292	+		DZA65_RS11280	0.18	+0.3
2,397,293	-		DZA65_RS11280	0.18	-0.7
2,397,293	-				+1.1
2,397,320	+		DZA65_RS11280	0.20	-1.9
2,397,321	-		DZA65_RS11280	0.20	-0.1
2,397,409	+		DZA65_RS11280	0.25	-1.1
2,397,409	+		DZA65_RS11280	0.25	-0.1
2,397,410	-		DZA65_RS11280	0.25	+0.1
2,397,411	+		DZA65_RS11280	0.25	+1.5
2,397,412	-		DZA65_RS11280	0.25	+2.7
2,397,412	-		DZA65_RS11280	0.25	-1.9
2,397,446	-		DZA65_RS11280	0.27	-1.3
2,397,484	+		DZA65_RS11280	0.29	+0.3
2,397,485	-		DZA65_RS11280	0.29	-0.7
2,397,485	-		DZA65_RS11280	0.29	+0.4
2,397,485	-		DZA65_RS11280	0.29	-0.7
2,397,511	+		DZA65_RS11280	0.30	+0.0
2,397,511	+		DZA65_RS11280	0.30	-1.4
2,397,511	+		DZA65_RS11280	0.30	-0.1
2,397,512	-		DZA65_RS11280	0.30	-0.4
2,397,512	-		DZA65_RS11280	0.30	-1.4
2,397,512	-		DZA65_RS11280	0.30	+1.3
2,397,607	-		DZA65_RS11280	0.36	-0.3
2,397,776	-		DZA65_RS11280	0.45	+0.7
2,397,901	+		DZA65_RS11280	0.52	-1.7
2,397,901	+		DZA65_RS11280	0.52	-0.9
2,397,901	+		DZA65_RS11280	0.52	-1.6
2,397,902	-		DZA65_RS11280	0.52	-1.9
2,397,955	+		DZA65_RS11280	0.54	+1.5
2,397,955	+		DZA65_RS11280	0.54	-0.1
2,397,955	+		DZA65_RS11280	0.54	-1.4
2,397,955	+		DZA65_RS11280	0.54	-0.6
2,397,955	+		DZA65_RS11280	0.54	-0.7
2,397,955	+		DZA65_RS11280	0.54	-0.4
2,397,956	-		DZA65_RS11280	0.55	-1.1
2,397,956	-		DZA65_RS11280	0.55	+1.2
2,397,956	-		DZA65_RS11280	0.55	+0.0
2,398,220	+		DZA65_RS11280	0.69	+1.2
2,398,220	+		DZA65_RS11280	0.69	-0.1
2,398,220	+		DZA65_RS11280	0.69	+1.6
2,398,220	+		DZA65_RS11280	0.69	-0.1
2,398,220	+		DZA65_RS11280	0.69	-0.1
2,398,220	+		DZA65_RS11280	0.69	+0.2
2,398,220	+		DZA65_RS11280	0.69	-0.1
2,398,220	+		DZA65_RS11280	0.69	+0.4
2,398,220	+		DZA65_RS11280	0.69	-0.9
2,398,220	+		DZA65_RS11280	0.69	+1.2
2,398,220	+		DZA65_RS11280	0.69	-1.2
2,398,220	+		DZA65_RS11280	0.69	-0.8
2,398,221	-		DZA65_RS11280	0.69	-0.8
2,398,221	-		DZA65_RS11280	0.69	-0.7
2,398,221	-		DZA65_RS11280	0.69	-1.9
2,398,221	-		DZA65_RS11280	0.69	+0.4
2,398,221	-		DZA65_RS11280	0.69	-2.1
2,398,221	-		DZA65_RS11280	0.69	-1.1
2,398,221	-		DZA65_RS11280	0.69	+1.7
2,398,221	-		DZA65_RS11280	0.69	+1.3
2,398,221	-		DZA65_RS11280	0.69	-0.7
2,398,221	-		DZA65_RS11280	0.69	-1.1
2,398,221	-		DZA65_RS11280	0.69	-2.4
2,398,222	+		DZA65_RS11280	0.69	-1.7
2,398,222	+		DZA65_RS11280	0.69	-1.1
2,398,222	+		DZA65_RS11280	0.69	+1.3
2,398,223	-		DZA65_RS11280	0.69	+0.3
2,398,223	-		DZA65_RS11280	0.69	-2.9
2,398,223	-		DZA65_RS11280	0.69	-2.0
2,398,299	-		DZA65_RS11280	0.73	+0.1
2,398,342	+		DZA65_RS11280	0.76	-0.7
2,398,373	-		DZA65_RS11280	0.77	-0.4
2,398,393	+		DZA65_RS11280	0.78	-1.7
2,398,394	-		DZA65_RS11280	0.78	+0.9
2,398,411	+		DZA65_RS11280	0.79	-1.7
2,398,411	+		DZA65_RS11280	0.79	-2.4
2,398,411	+		DZA65_RS11280	0.79	-1.7
2,398,412	-		DZA65_RS11280	0.79	-0.8
2,398,426	+		DZA65_RS11280	0.80	-1.8
2,398,427	-		DZA65_RS11280	0.80	-1.3
2,398,427	-		DZA65_RS11280	0.80	-0.3
2,398,507	+		DZA65_RS11280	0.85	+2.9
2,398,507	+		DZA65_RS11280	0.85	+0.0
2,398,508	-		DZA65_RS11280	0.85	-2.7
2,398,529	-		DZA65_RS11280	0.86	+0.6
2,398,529	-		DZA65_RS11280	0.86	-0.4
2,398,533	+		DZA65_RS11280	0.86	-1.1
2,398,533	+		DZA65_RS11280	0.86	+0.5
2,398,534	-		DZA65_RS11280	0.86	+0.5
2,398,534	-		DZA65_RS11280	0.86	+0.3
2,398,534	-		DZA65_RS11280	0.86	-1.7
2,398,650	+				-1.7
2,398,651	-				-0.6
2,398,651	-				-0.8
2,398,651	-				+0.4
2,398,651	-				+0.2
2,398,651	-				+0.0
2,398,660	+				-1.3
2,398,661	-				-0.4
2,398,680	+				+0.4
2,398,681	-				+0.9
2,398,681	-				-2.4
2,398,681	-				-2.1
2,398,733	+				+0.9
2,398,790	-				+0.4
2,398,808	-				-1.1
2,398,822	+				-0.9
2,398,822	+				+0.4
2,398,822	+				+2.3
2,398,822	+				-0.1
2,398,823	-				-1.1
2,398,844	+				+0.1
2,398,845	-				-0.9
2,398,848	+				-0.7
2,398,848	+				-0.4
2,398,849	-				-0.7
2,398,849	-				-1.9
2,398,849	-				-1.0
2,398,849	-				-1.1
2,398,852	+				+2.1
2,398,853	-				-0.4
2,398,853	-				+0.9
2,398,853	-				-0.7
2,398,858	+				+0.2
2,398,858	+				-1.6
2,398,858	+				-1.3
2,398,858	+				+2.5
2,398,858	+				-1.9
2,398,862	+				+1.6
2,398,863	-				-0.7
2,398,900	+				-2.4
2,398,900	+				-1.4
2,398,915	-				-0.4
2,398,967	+				+1.7
2,398,968	-				+1.2
2,398,972	+				-2.8
2,398,978	-				-0.7
2,399,026	-				-0.1
2,399,059	-				-2.1
2,399,069	+		DZA65_RS11285	0.10	+1.1
2,399,070	-		DZA65_RS11285	0.10	+0.9
2,399,084	+		DZA65_RS11285	0.11	-1.1
2,399,084	+		DZA65_RS11285	0.11	-2.4
2,399,084	+				-0.7
2,399,085	-		DZA65_RS11285	0.11	+0.0
2,399,085	-		DZA65_RS11285	0.11	+0.7
2,399,086	+		DZA65_RS11285	0.11	-0.1
2,399,086	+		DZA65_RS11285	0.11	-1.1
2,399,086	+		DZA65_RS11285	0.11	+0.1
2,399,086	+		DZA65_RS11285	0.11	+1.5
2,399,086	+		DZA65_RS11285	0.11	-1.1
2,399,086	+		DZA65_RS11285	0.11	-0.5
2,399,087	-		DZA65_RS11285	0.12	-1.2
2,399,124	+		DZA65_RS11285	0.14	-0.7
2,399,124	+		DZA65_RS11285	0.14	+0.9
2,399,124	+		DZA65_RS11285	0.14	-1.1
2,399,125	-		DZA65_RS11285	0.14	-0.1
2,399,280	+		DZA65_RS11285	0.24	-1.1
2,399,280	+		DZA65_RS11285	0.24	-1.4
2,399,281	-		DZA65_RS11285	0.24	-2.6
2,399,281	-		DZA65_RS11285	0.24	-0.1
2,399,281	-		DZA65_RS11285	0.24	-0.7
2,399,304	+		DZA65_RS11285	0.25	-0.7
2,399,304	+		DZA65_RS11285	0.25	+0.2
2,399,304	+		DZA65_RS11285	0.25	-0.1
2,399,304	+		DZA65_RS11285	0.25	-1.7
2,399,305	-		DZA65_RS11285	0.26	+0.9
2,399,305	-		DZA65_RS11285	0.26	-0.8
2,399,305	-		DZA65_RS11285	0.26	-0.4
2,399,305	-		DZA65_RS11285	0.26	-3.7
2,399,305	-		DZA65_RS11285	0.26	+1.2
2,399,305	-		DZA65_RS11285	0.26	-1.9
2,399,305	-		DZA65_RS11285	0.26	-2.4
2,399,336	+		DZA65_RS11285	0.28	-2.5
2,399,336	+				-1.7
2,399,336	+		DZA65_RS11285	0.28	-1.3
2,399,336	+		DZA65_RS11285	0.28	-0.8
2,399,336	+		DZA65_RS11285	0.28	-1.9
2,399,336	+		DZA65_RS11285	0.28	-1.5
2,399,336	+		DZA65_RS11285	0.28	-1.1
2,399,393	+				-1.8
2,399,393	+		DZA65_RS11285	0.31	-0.4
2,399,393	+		DZA65_RS11285	0.31	-0.7
2,399,394	-		DZA65_RS11285	0.31	+0.9
2,399,394	-		DZA65_RS11285	0.31	-2.0
2,399,394	-		DZA65_RS11285	0.31	-1.7
2,399,394	-		DZA65_RS11285	0.31	+2.3
2,399,396	+		DZA65_RS11285	0.31	+2.2
2,399,396	+		DZA65_RS11285	0.31	-0.5
2,399,396	+		DZA65_RS11285	0.31	-0.5
2,399,396	+		DZA65_RS11285	0.31	-0.1
2,399,396	+		DZA65_RS11285	0.31	+0.4
2,399,396	+		DZA65_RS11285	0.31	-2.4
2,399,396	+		DZA65_RS11285	0.31	-1.7
2,399,396	+		DZA65_RS11285	0.31	-0.1
2,399,396	+		DZA65_RS11285	0.31	-1.4
2,399,396	+		DZA65_RS11285	0.31	-0.7
2,399,396	+		DZA65_RS11285	0.31	+0.2
2,399,396	+		DZA65_RS11285	0.31	+0.6
2,399,397	-		DZA65_RS11285	0.31	-0.7
2,399,397	-		DZA65_RS11285	0.31	-1.0
2,399,397	-		DZA65_RS11285	0.31	-2.6
2,399,397	-		DZA65_RS11285	0.31	-0.1
2,399,397	-		DZA65_RS11285	0.31	-0.7
2,399,397	-		DZA65_RS11285	0.31	-0.3
2,399,402	+		DZA65_RS11285	0.32	-3.3
2,399,402	+		DZA65_RS11285	0.32	+0.9
2,399,402	+		DZA65_RS11285	0.32	-1.3
2,399,402	+		DZA65_RS11285	0.32	-0.3
2,399,402	+		DZA65_RS11285	0.32	-0.1
2,399,402	+		DZA65_RS11285	0.32	-1.4
2,399,403	-		DZA65_RS11285	0.32	-0.7
2,399,403	-		DZA65_RS11285	0.32	+0.1
2,399,403	-		DZA65_RS11285	0.32	-1.3
2,399,403	-		DZA65_RS11285	0.32	-1.1
2,399,403	-		DZA65_RS11285	0.32	-1.7
2,399,403	-		DZA65_RS11285	0.32	+1.3
2,399,403	-		DZA65_RS11285	0.32	-1.1
2,399,403	-		DZA65_RS11285	0.32	-0.1
2,399,403	-		DZA65_RS11285	0.32	+0.7
2,399,599	+		DZA65_RS11285	0.44	-0.1
2,399,599	+		DZA65_RS11285	0.44	-2.9
2,399,599	+		DZA65_RS11285	0.44	-0.1
2,399,599	+		DZA65_RS11285	0.44	+0.2
2,399,599	+		DZA65_RS11285	0.44	-1.1
2,399,600	-		DZA65_RS11285	0.45	+0.9
2,399,600	-		DZA65_RS11285	0.45	-0.9
2,399,600	-		DZA65_RS11285	0.45	-1.3
2,399,600	-		DZA65_RS11285	0.45	-2.5
2,399,620	+		DZA65_RS11285	0.46	+0.1
2,399,620	+		DZA65_RS11285	0.46	-2.1
2,399,620	+		DZA65_RS11285	0.46	-2.5
2,399,621	-		DZA65_RS11285	0.46	-0.4
2,399,621	-				-2.4
2,399,621	-		DZA65_RS11285	0.46	-0.6
2,399,621	-		DZA65_RS11285	0.46	-1.7
2,399,621	-		DZA65_RS11285	0.46	-1.1
2,399,621	-		DZA65_RS11285	0.46	+2.1
2,399,621	-		DZA65_RS11285	0.46	+1.2
2,399,633	+		DZA65_RS11285	0.47	-1.7
2,399,633	+		DZA65_RS11285	0.47	-2.0
2,399,637	-		DZA65_RS11285	0.47	-1.1
2,399,669	+				-1.1
2,399,669	+		DZA65_RS11285	0.49	-0.7
2,399,669	+		DZA65_RS11285	0.49	-1.4
2,399,669	+		DZA65_RS11285	0.49	+0.1
2,399,669	+		DZA65_RS11285	0.49	-0.3
2,399,669	+		DZA65_RS11285	0.49	-1.4
2,399,669	+		DZA65_RS11285	0.49	-0.6
2,399,669	+		DZA65_RS11285	0.49	-0.4
2,399,669	+				-1.2
2,399,669	+		DZA65_RS11285	0.49	+0.3
2,399,669	+		DZA65_RS11285	0.49	-0.1
2,399,669	+		DZA65_RS11285	0.49	+0.3
2,399,669	+		DZA65_RS11285	0.49	+0.1
2,399,669	+		DZA65_RS11285	0.49	-1.9
2,399,669	+		DZA65_RS11285	0.49	-0.1
2,399,669	+		DZA65_RS11285	0.49	-3.5
2,399,669	+		DZA65_RS11285	0.49	-0.6
2,399,670	-		DZA65_RS11285	0.49	-0.7
2,399,670	-		DZA65_RS11285	0.49	-0.7
2,399,670	-		DZA65_RS11285	0.49	-0.4
2,399,670	-		DZA65_RS11285	0.49	+0.9
2,399,670	-		DZA65_RS11285	0.49	-0.4
2,399,670	-		DZA65_RS11285	0.49	-1.7
2,399,670	-		DZA65_RS11285	0.49	-0.1
2,399,670	-		DZA65_RS11285	0.49	+0.1
2,399,670	-		DZA65_RS11285	0.49	-0.7
2,399,670	-		DZA65_RS11285	0.49	+0.9
2,399,670	-		DZA65_RS11285	0.49	-1.1
2,399,670	-		DZA65_RS11285	0.49	-0.1
2,399,670	-		DZA65_RS11285	0.49	-0.7
2,399,670	-		DZA65_RS11285	0.49	-1.7