Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09860

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
2,077,819	+		DZA65_RS09855	0.56	+0.7
2,077,820	-		DZA65_RS09855	0.56	-0.4
2,077,820	-		DZA65_RS09855	0.56	+1.7
2,077,820	-		DZA65_RS09855	0.56	-0.6
2,077,820	-		DZA65_RS09855	0.56	-0.9
2,077,828	+		DZA65_RS09855	0.56	-2.0
2,077,828	+		DZA65_RS09855	0.56	+0.8
2,077,829	-		DZA65_RS09855	0.56	+0.4
2,077,874	-		DZA65_RS09855	0.59	-1.0
2,077,894	+		DZA65_RS09855	0.61	-2.5
2,077,894	+		DZA65_RS09855	0.61	+1.1
2,077,895	-		DZA65_RS09855	0.61	+1.0
2,077,979	+		DZA65_RS09855	0.67	+0.5
2,078,051	+		DZA65_RS09855	0.72	-0.6
2,078,064	+		DZA65_RS09855	0.72	+1.0
2,078,064	+		DZA65_RS09855	0.72	+0.1
2,078,065	-		DZA65_RS09855	0.72	+0.8
2,078,065	-		DZA65_RS09855	0.72	+1.3
2,078,124	+		DZA65_RS09855	0.76	-1.4
2,078,137	+		DZA65_RS09855	0.77	-1.4
2,078,137	+		DZA65_RS09855	0.77	-0.3
2,078,137	+		DZA65_RS09855	0.77	+0.1
2,078,138	-		DZA65_RS09855	0.77	-2.5
2,078,138	-		DZA65_RS09855	0.77	+2.0
2,078,138	-		DZA65_RS09855	0.77	-0.5
2,078,138	-		DZA65_RS09855	0.77	+0.3
2,078,138	-		DZA65_RS09855	0.77	+1.3
2,078,138	-		DZA65_RS09855	0.77	+1.9
2,078,138	-		DZA65_RS09855	0.77	-1.4
2,078,142	+		DZA65_RS09855	0.78	+1.3
2,078,142	+		DZA65_RS09855	0.78	+0.6
2,078,142	+		DZA65_RS09855	0.78	+0.4
2,078,143	-		DZA65_RS09855	0.78	+1.0
2,078,143	-		DZA65_RS09855	0.78	-1.9
2,078,163	-		DZA65_RS09855	0.79	-1.6
2,078,163	-		DZA65_RS09855	0.79	+2.5
2,078,197	+		DZA65_RS09855	0.81	+1.5
2,078,245	+		DZA65_RS09855	0.85	-0.0
2,078,245	+		DZA65_RS09855	0.85	-0.2
2,078,245	+		DZA65_RS09855	0.85	-1.0
2,078,245	+		DZA65_RS09855	0.85	+1.0
2,078,245	+		DZA65_RS09855	0.85	-1.0
2,078,245	+		DZA65_RS09855	0.85	-1.0
2,078,246	-		DZA65_RS09855	0.85	+0.4
2,078,246	-		DZA65_RS09855	0.85	-1.4
2,078,246	-		DZA65_RS09855	0.85	-0.9
2,078,248	+		DZA65_RS09855	0.85	+1.5
2,078,255	+		DZA65_RS09855	0.85	-1.4
2,078,255	+		DZA65_RS09855	0.85	-4.0
2,078,256	-		DZA65_RS09855	0.85	+1.0
2,078,256	-		DZA65_RS09855	0.85	+0.3
2,078,256	-		DZA65_RS09855	0.85	-0.1
2,078,256	-		DZA65_RS09855	0.85	+0.7
2,078,268	+		DZA65_RS09855	0.86	-0.3
2,078,288	-		DZA65_RS09855	0.88	-0.0
2,078,288	-		DZA65_RS09855	0.88	-3.1
2,078,288	-		DZA65_RS09855	0.88	+2.0
2,078,308	+		DZA65_RS09855	0.89	-1.6
2,078,308	+		DZA65_RS09855	0.89	+0.4
2,078,308	+		DZA65_RS09855	0.89	+0.5
2,078,308	+		DZA65_RS09855	0.89	+1.2
2,078,309	-		DZA65_RS09855	0.89	-1.3
2,078,309	-		DZA65_RS09855	0.89	-0.5
2,078,309	-		DZA65_RS09855	0.89	+1.0
2,078,319	+		DZA65_RS09855	0.90	-2.6
2,078,319	+		DZA65_RS09855	0.90	-1.2
2,078,319	+		DZA65_RS09855	0.90	-1.4
2,078,319	+		DZA65_RS09855	0.90	-0.9
2,078,320	-		DZA65_RS09855	0.90	-0.3
2,078,354	+				+0.2
2,078,422	+				-2.0
2,078,422	+				+0.8
2,078,422	+				+1.0
2,078,423	-				+1.3
2,078,541	+				+2.3
2,078,541	+				+0.2
2,078,542	-				-0.6
2,078,542	-				+0.4
2,078,542	-				-1.6
2,078,543	+				+0.2
2,078,543	+				+0.9
2,078,544	-				-1.6
2,078,544	-				-0.6
2,078,544	-				+0.2
2,078,544	-				-1.9
2,078,544	-				-1.6
2,078,544	-				-1.4
2,078,551	+				-0.3
2,078,552	-				-0.7
2,078,552	-				-0.3
2,078,552	-				+1.8
2,078,552	-				-0.6
2,078,552	-				-1.2
2,078,552	-				-0.1
2,078,552	-				+0.2
2,078,552	-				+0.2
2,078,552	-				+0.1
2,078,552	-				-1.2
2,078,612	-				-0.1
2,078,620	+				-0.6
2,078,620	+				+1.5
2,078,620	+				+0.1
2,078,620	+				+1.4
2,078,621	-				-2.1
2,078,621	-				+0.8
2,078,621	-				-0.9
2,078,621	-				-0.1
2,078,621	-				-0.2
2,078,621	-				-0.5
2,078,621	-				+0.1
2,078,625	+				+0.5
2,078,625	+				+2.0
2,078,625	+				+1.4
2,078,625	+				-2.1
2,078,625	+				+0.9
2,078,625	+				+0.1
2,078,625	+				+0.9
2,078,625	+				+0.8
2,078,625	+				+0.4
2,078,626	-				-1.4
2,078,626	-				-0.4
2,078,626	-				+1.3
2,078,626	-				-0.1
2,078,626	-				-0.4
2,078,626	-				-0.1
2,078,626	-				-1.9
2,078,628	+				+0.4
2,078,628	+				-2.1
2,078,628	+				-0.1
2,078,628	+				-1.2
2,078,629	-				+0.1
2,078,629	-				-1.6
2,078,629	-				-0.4
2,078,631	-				-0.4
2,078,708	+				-1.1
2,078,708	+				-2.1
2,078,708	+				-3.6
2,078,708	+				-2.4
2,078,708	+				-0.5
2,078,708	+				+2.9
2,078,708	+				-1.1
2,078,708	+				-0.5
2,078,708	+				-1.6
2,078,708	+				-0.6
2,078,708	+				+2.4
2,078,708	+				-0.5
2,078,708	+				+2.1
2,078,708	+				-1.5
2,078,709	-				-0.9
2,078,709	-				+0.8
2,078,709	-				-0.1
2,078,709	-				+1.3
2,078,709	-				-0.3
2,078,709	-				-0.2
2,078,709	-				-1.7
2,078,790	+				-1.5
2,078,791	-				-2.1
2,078,791	-				+0.9
2,078,791	-				+1.5
2,078,791	-				+0.9
2,078,865	-				+1.4
2,078,866	+				-1.5
2,078,866	+				+1.5
2,078,866	+				+0.4
2,078,866	+				+1.4
2,078,866	+				-1.6
2,078,866	+				+1.5
2,078,866	+				+1.5
2,078,866	+				-2.5
2,078,866	+				-1.0
2,078,867	-		DZA65_RS09860	0.10	+1.5
2,078,867	-		DZA65_RS09860	0.10	-0.9
2,078,867	-		DZA65_RS09860	0.10	-1.9
2,078,867	-		DZA65_RS09860	0.10	-0.6
2,078,867	-		DZA65_RS09860	0.10	-2.1
2,078,867	-				-1.6
2,078,883	-		DZA65_RS09860	0.12	+0.2
2,078,891	+		DZA65_RS09860	0.12	+1.4
2,078,892	-				+0.4
2,078,892	-		DZA65_RS09860	0.12	+0.9
2,079,077	+		DZA65_RS09860	0.31	-0.3
2,079,077	+		DZA65_RS09860	0.31	-0.1
2,079,077	+		DZA65_RS09860	0.31	-0.3
2,079,118	-		DZA65_RS09860	0.35	-1.8
2,079,118	-		DZA65_RS09860	0.35	-0.1
2,079,118	-		DZA65_RS09860	0.35	-2.1
2,079,128	+		DZA65_RS09860	0.36	-0.1
2,079,128	+		DZA65_RS09860	0.36	-1.2
2,079,128	+		DZA65_RS09860	0.36	+0.9
2,079,128	+		DZA65_RS09860	0.36	+1.3
2,079,128	+		DZA65_RS09860	0.36	+1.2
2,079,128	+		DZA65_RS09860	0.36	-0.2
2,079,128	+		DZA65_RS09860	0.36	+0.8
2,079,128	+		DZA65_RS09860	0.36	-1.1
2,079,128	+		DZA65_RS09860	0.36	+0.2
2,079,129	-				+2.5
2,079,129	-		DZA65_RS09860	0.36	+0.5
2,079,129	-		DZA65_RS09860	0.36	-1.1
2,079,129	-		DZA65_RS09860	0.36	+0.6
2,079,129	-		DZA65_RS09860	0.36	-1.9
2,079,129	-		DZA65_RS09860	0.36	+1.8
2,079,130	+		DZA65_RS09860	0.36	+0.1
2,079,130	+		DZA65_RS09860	0.36	-0.6
2,079,130	+		DZA65_RS09860	0.36	+0.1
2,079,130	+		DZA65_RS09860	0.36	-1.4
2,079,130	+		DZA65_RS09860	0.36	-0.1
2,079,130	+		DZA65_RS09860	0.36	+1.8
2,079,130	+		DZA65_RS09860	0.36	-1.6
2,079,130	+		DZA65_RS09860	0.36	-0.6
2,079,130	+		DZA65_RS09860	0.36	+2.3
2,079,130	+		DZA65_RS09860	0.36	-1.8
2,079,130	+		DZA65_RS09860	0.36	-1.9
2,079,130	+		DZA65_RS09860	0.36	+0.5
2,079,130	+		DZA65_RS09860	0.36	-1.4
2,079,130	+		DZA65_RS09860	0.36	-1.6
2,079,131	-		DZA65_RS09860	0.36	+0.2
2,079,131	-		DZA65_RS09860	0.36	-1.6
2,079,131	-		DZA65_RS09860	0.36	+1.9
2,079,131	-		DZA65_RS09860	0.36	-0.6
2,079,131	-		DZA65_RS09860	0.36	-2.1
2,079,131	-		DZA65_RS09860	0.36	-2.6
2,079,131	-		DZA65_RS09860	0.36	+0.4
2,079,131	-		DZA65_RS09860	0.36	-2.8
2,079,131	-		DZA65_RS09860	0.36	-0.1
2,079,131	-		DZA65_RS09860	0.36	-0.6
2,079,131	-		DZA65_RS09860	0.36	+0.1
2,079,131	-		DZA65_RS09860	0.36	-0.8
2,079,131	-		DZA65_RS09860	0.36	-0.5
2,079,131	-		DZA65_RS09860	0.36	-1.0
2,079,131	-		DZA65_RS09860	0.36	-0.9
2,079,405	-		DZA65_RS09860	0.63	+0.4
2,079,434	-		DZA65_RS09860	0.66	-0.1
2,079,494	-		DZA65_RS09860	0.72	-2.2
2,079,494	-		DZA65_RS09860	0.72	-1.0
2,079,494	-		DZA65_RS09860	0.72	-0.6
2,079,555	+		DZA65_RS09860	0.78	-0.1
2,079,556	-		DZA65_RS09860	0.78	+0.4
2,079,556	-		DZA65_RS09860	0.78	+0.9
2,079,602	+		DZA65_RS09860	0.83	-0.3
2,079,603	-		DZA65_RS09860	0.83	-2.5
2,079,603	-		DZA65_RS09860	0.83	-2.2
2,079,603	-		DZA65_RS09860	0.83	+0.2
2,079,604	+		DZA65_RS09860	0.83	+0.0
2,079,604	+		DZA65_RS09860	0.83	-2.9
2,079,604	+		DZA65_RS09860	0.83	-2.2
2,079,605	-		DZA65_RS09860	0.83	-1.9
2,079,605	-		DZA65_RS09860	0.83	-1.6
2,079,605	-		DZA65_RS09860	0.83	-2.4
2,079,605	-		DZA65_RS09860	0.83	-1.1
2,079,650	-		DZA65_RS09860	0.88	-1.6
2,079,732	+				+0.1
2,079,732	+				+0.9
2,079,732	+				+2.2
2,079,732	+				+0.4
2,079,732	+				+0.5
2,079,733	-				+2.1
2,079,733	-				-0.1
2,079,733	-				-0.2
2,079,733	-				-1.0
2,079,787	-				-0.1
2,079,787	-				-1.4
2,079,955	+				+0.5
2,079,955	+				-0.2
2,079,959	+				-0.4
2,079,959	+				-1.1
2,080,102	+		DZA65_RS09865	0.16	+0.4
2,080,169	+		DZA65_RS09865	0.20	+0.2
2,080,181	-		DZA65_RS09865	0.21	-2.8
2,080,185	-		DZA65_RS09865	0.21	+0.7
2,080,243	+		DZA65_RS09865	0.25	+0.9
2,080,243	+		DZA65_RS09865	0.25	-1.6
2,080,243	+		DZA65_RS09865	0.25	+0.5
2,080,244	-		DZA65_RS09865	0.25	-1.6
2,080,244	-		DZA65_RS09865	0.25	+1.4
2,080,244	-		DZA65_RS09865	0.25	+0.7
2,080,246	+		DZA65_RS09865	0.25	+2.8
2,080,246	+		DZA65_RS09865	0.25	-0.3
2,080,246	+		DZA65_RS09865	0.25	+1.3
2,080,246	+		DZA65_RS09865	0.25	-0.6
2,080,246	+		DZA65_RS09865	0.25	-1.2
2,080,246	+		DZA65_RS09865	0.25	-1.4
2,080,246	+		DZA65_RS09865	0.25	-0.1
2,080,247	-		DZA65_RS09865	0.25	-0.3
2,080,247	-		DZA65_RS09865	0.25	-0.6
2,080,247	-		DZA65_RS09865	0.25	+1.4
2,080,247	-		DZA65_RS09865	0.25	-0.1
2,080,247	-		DZA65_RS09865	0.25	+0.5
2,080,247	-		DZA65_RS09865	0.25	-1.4
2,080,396	+		DZA65_RS09865	0.34	-0.3
2,080,397	-		DZA65_RS09865	0.34	+0.9
2,080,397	-		DZA65_RS09865	0.34	-0.5
2,080,499	+		DZA65_RS09865	0.40	-0.4
2,080,500	-		DZA65_RS09865	0.40	+1.9
2,080,500	-		DZA65_RS09865	0.40	-0.6
2,080,500	-		DZA65_RS09865	0.40	+1.5
2,080,508	+		DZA65_RS09865	0.41	-1.9
2,080,509	-		DZA65_RS09865	0.41	-1.1
2,080,509	-		DZA65_RS09865	0.41	-0.6
2,080,510	+		DZA65_RS09865	0.41	+1.6
2,080,510	+		DZA65_RS09865	0.41	-0.6
2,080,510	+		DZA65_RS09865	0.41	+0.3
2,080,511	-		DZA65_RS09865	0.41	-1.6
2,080,511	-		DZA65_RS09865	0.41	+2.1
2,080,511	-		DZA65_RS09865	0.41	-0.2
2,080,511	-		DZA65_RS09865	0.41	-0.1
2,080,609	+		DZA65_RS09865	0.47	+0.6
2,080,609	+		DZA65_RS09865	0.47	+1.1
2,080,610	-		DZA65_RS09865	0.47	-1.1
2,080,610	-		DZA65_RS09865	0.47	-1.6
2,080,614	-		DZA65_RS09865	0.47	-0.4
2,080,614	-		DZA65_RS09865	0.47	+0.7
2,080,681	+		DZA65_RS09865	0.51	+0.2
2,080,681	+		DZA65_RS09865	0.51	-0.1
2,080,681	+		DZA65_RS09865	0.51	-0.1
2,080,681	+		DZA65_RS09865	0.51	-0.9
2,080,681	+		DZA65_RS09865	0.51	-1.1
2,080,681	+				-0.1
2,080,681	+		DZA65_RS09865	0.51	-1.3
2,080,681	+				-0.9
2,080,681	+		DZA65_RS09865	0.51	-0.3
2,080,681	+		DZA65_RS09865	0.51	-0.6
2,080,681	+		DZA65_RS09865	0.51	-0.6
2,080,681	+		DZA65_RS09865	0.51	-0.6
2,080,681	+		DZA65_RS09865	0.51	-1.1
2,080,681	+		DZA65_RS09865	0.51	-1.4
2,080,681	+		DZA65_RS09865	0.51	-3.1
2,080,682	-		DZA65_RS09865	0.51	-0.1
2,080,682	-		DZA65_RS09865	0.51	-0.3
2,080,682	-		DZA65_RS09865	0.51	-1.6
2,080,682	-		DZA65_RS09865	0.51	+0.4
2,080,682	-		DZA65_RS09865	0.51	+1.9
2,080,682	-		DZA65_RS09865	0.51	-2.8
2,080,682	-		DZA65_RS09865	0.51	-0.6
2,080,682	-		DZA65_RS09865	0.51	+2.5
2,080,682	-		DZA65_RS09865	0.51	+1.5
2,080,682	-		DZA65_RS09865	0.51	-0.9
2,080,682	-		DZA65_RS09865	0.51	-1.1
2,080,682	-		DZA65_RS09865	0.51	+0.2
2,080,682	-		DZA65_RS09865	0.51	-0.6
2,080,682	-		DZA65_RS09865	0.51	-0.8
2,080,682	-		DZA65_RS09865	0.51	+1.7
2,080,682	-		DZA65_RS09865	0.51	-0.4
2,080,685	+		DZA65_RS09865	0.51	+0.5
2,080,685	+		DZA65_RS09865	0.51	-1.4
2,080,685	+		DZA65_RS09865	0.51	-0.6
2,080,685	+		DZA65_RS09865	0.51	+1.3
2,080,686	-		DZA65_RS09865	0.52	+0.9
2,080,686	-		DZA65_RS09865	0.52	+0.4
2,080,686	-		DZA65_RS09865	0.52	+1.4
2,080,721	+		DZA65_RS09865	0.54	+0.8
2,080,721	+		DZA65_RS09865	0.54	-1.6
2,080,722	-		DZA65_RS09865	0.54	+0.9
2,080,722	-		DZA65_RS09865	0.54	-1.9
2,080,722	-		DZA65_RS09865	0.54	+1.3
2,080,722	-		DZA65_RS09865	0.54	-0.6
2,080,722	-		DZA65_RS09865	0.54	-1.4