Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09280

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
1,955,782	+				-2.8
1,955,782	+				-0.4
1,955,783	-				-0.4
1,955,783	-				-0.5
1,955,783	-				+0.4
1,955,914	+				+0.6
1,955,974	+				+0.1
1,955,979	+				-0.0
1,955,979	+				+1.7
1,955,979	+				-1.8
1,955,980	-				-0.0
1,955,980	-				-1.4
1,955,984	-				-2.2
1,955,984	-				-1.6
1,955,989	+				+1.8
1,956,069	+				-0.5
1,956,069	+				-0.8
1,956,069	+				-2.8
1,956,069	+				+2.3
1,956,070	-				-1.7
1,956,070	-				-2.4
1,956,070	-				-0.0
1,956,140	+				-0.4
1,956,141	-				+0.3
1,956,169	-		DZA65_RS09275	0.14	-2.2
1,956,198	+		DZA65_RS09275	0.19	-1.4
1,956,212	+		DZA65_RS09275	0.21	-2.4
1,956,213	-		DZA65_RS09275	0.21	+1.5
1,956,213	-		DZA65_RS09275	0.21	-0.4
1,956,234	-		DZA65_RS09275	0.24	+0.5
1,956,247	+		DZA65_RS09275	0.26	+3.0
1,956,247	+		DZA65_RS09275	0.26	+0.3
1,956,247	+		DZA65_RS09275	0.26	-0.8
1,956,247	+		DZA65_RS09275	0.26	-0.6
1,956,248	-		DZA65_RS09275	0.26	+1.9
1,956,248	-		DZA65_RS09275	0.26	+0.6
1,956,306	+		DZA65_RS09275	0.35	-0.3
1,956,357	+		DZA65_RS09275	0.43	-2.4
1,956,357	+		DZA65_RS09275	0.43	-1.0
1,956,358	-		DZA65_RS09275	0.43	-1.4
1,956,358	-		DZA65_RS09275	0.43	+0.4
1,956,391	+		DZA65_RS09275	0.48	+1.0
1,956,410	+		DZA65_RS09275	0.51	-1.6
1,956,410	+		DZA65_RS09275	0.51	-0.6
1,956,410	+		DZA65_RS09275	0.51	-0.4
1,956,411	-		DZA65_RS09275	0.51	-1.5
1,956,411	-		DZA65_RS09275	0.51	+1.1
1,956,457	+		DZA65_RS09275	0.58	-1.0
1,956,457	+		DZA65_RS09275	0.58	+0.3
1,956,457	+		DZA65_RS09275	0.58	-1.0
1,956,457	+		DZA65_RS09275	0.58	+0.8
1,956,457	+		DZA65_RS09275	0.58	-0.6
1,956,457	+		DZA65_RS09275	0.58	-0.4
1,956,457	+		DZA65_RS09275	0.58	+1.4
1,956,457	+		DZA65_RS09275	0.58	-1.8
1,956,457	+		DZA65_RS09275	0.58	+0.5
1,956,457	+		DZA65_RS09275	0.58	-0.6
1,956,457	+		DZA65_RS09275	0.58	-0.6
1,956,457	+		DZA65_RS09275	0.58	-2.3
1,956,457	+		DZA65_RS09275	0.58	-2.4
1,956,457	+		DZA65_RS09275	0.58	+0.3
1,956,457	+		DZA65_RS09275	0.58	-0.6
1,956,457	+		DZA65_RS09275	0.58	-1.0
1,956,458	-		DZA65_RS09275	0.58	-0.6
1,956,458	-		DZA65_RS09275	0.58	-0.5
1,956,458	-				-0.0
1,956,458	-		DZA65_RS09275	0.58	+0.3
1,956,458	-		DZA65_RS09275	0.58	+1.6
1,956,458	-		DZA65_RS09275	0.58	+0.4
1,956,458	-		DZA65_RS09275	0.58	-1.6
1,956,458	-		DZA65_RS09275	0.58	-2.2
1,956,458	-		DZA65_RS09275	0.58	-1.4
1,956,458	-		DZA65_RS09275	0.58	-1.2
1,956,458	-		DZA65_RS09275	0.58	-0.0
1,956,458	-		DZA65_RS09275	0.58	-0.4
1,956,458	-		DZA65_RS09275	0.58	+0.1
1,956,458	-		DZA65_RS09275	0.58	-2.2
1,956,458	-		DZA65_RS09275	0.58	-1.8
1,956,458	-		DZA65_RS09275	0.58	-2.8
1,956,458	-		DZA65_RS09275	0.58	+1.7
1,956,458	-		DZA65_RS09275	0.58	+0.7
1,956,615	-		DZA65_RS09275	0.82	+1.0
1,956,615	-		DZA65_RS09275	0.82	-0.7
1,956,730	+				+1.4
1,956,731	-				-0.4
1,956,731	-				-0.0
1,956,731	-				+1.0
1,956,856	-				+0.1
1,957,051	+		DZA65_RS09280	0.26	-1.2
1,957,052	-		DZA65_RS09280	0.26	-0.0
1,957,052	-		DZA65_RS09280	0.26	-0.6
1,957,052	-		DZA65_RS09280	0.26	-0.0
1,957,052	-		DZA65_RS09280	0.26	+0.2
1,957,052	-		DZA65_RS09280	0.26	+0.2
1,957,052	-		DZA65_RS09280	0.26	-0.4
1,957,108	+		DZA65_RS09280	0.31	-2.8
1,957,108	+		DZA65_RS09280	0.31	-0.4
1,957,108	+		DZA65_RS09280	0.31	-0.0
1,957,108	+		DZA65_RS09280	0.31	-0.6
1,957,109	-		DZA65_RS09280	0.31	-1.0
1,957,109	-		DZA65_RS09280	0.31	-1.4
1,957,109	-		DZA65_RS09280	0.31	-2.4
1,957,109	-		DZA65_RS09280	0.31	-2.4
1,957,109	-		DZA65_RS09280	0.31	-2.2
1,957,109	-		DZA65_RS09280	0.31	-1.6
1,957,109	-		DZA65_RS09280	0.31	-1.8
1,957,187	+		DZA65_RS09280	0.38	-0.6
1,957,187	+		DZA65_RS09280	0.38	-0.4
1,957,187	+		DZA65_RS09280	0.38	-1.5
1,957,187	+		DZA65_RS09280	0.38	+0.4
1,957,187	+		DZA65_RS09280	0.38	-0.7
1,957,187	+		DZA65_RS09280	0.38	-0.8
1,957,187	+		DZA65_RS09280	0.38	+0.5
1,957,187	+		DZA65_RS09280	0.38	-1.4
1,957,187	+		DZA65_RS09280	0.38	-0.6
1,957,187	+		DZA65_RS09280	0.38	-1.6
1,957,188	-		DZA65_RS09280	0.38	-1.4
1,957,188	-		DZA65_RS09280	0.38	-1.0
1,957,188	-		DZA65_RS09280	0.38	+1.8
1,957,188	-				-1.8
1,957,188	-		DZA65_RS09280	0.38	+1.7
1,957,262	+		DZA65_RS09280	0.44	+1.4
1,957,262	+		DZA65_RS09280	0.44	-0.1
1,957,276	+		DZA65_RS09280	0.45	-0.0
1,957,276	+		DZA65_RS09280	0.45	-0.0
1,957,276	+		DZA65_RS09280	0.45	-1.0
1,957,303	-		DZA65_RS09280	0.48	-0.6
1,957,348	-		DZA65_RS09280	0.51	-0.3
1,957,394	+		DZA65_RS09280	0.55	-0.4
1,957,394	+		DZA65_RS09280	0.55	+0.6
1,957,394	+		DZA65_RS09280	0.55	-0.5
1,957,394	+		DZA65_RS09280	0.55	-0.0
1,957,395	-		DZA65_RS09280	0.55	-1.2
1,957,395	-		DZA65_RS09280	0.55	+0.2
1,957,395	-		DZA65_RS09280	0.55	-1.7
1,957,395	-		DZA65_RS09280	0.55	-0.0
1,957,395	-		DZA65_RS09280	0.55	-1.4
1,957,395	-		DZA65_RS09280	0.55	-1.6
1,957,395	-		DZA65_RS09280	0.55	-1.8
1,957,441	+		DZA65_RS09280	0.59	+1.0
1,957,441	+		DZA65_RS09280	0.59	+1.2
1,957,441	+		DZA65_RS09280	0.59	-1.0
1,957,441	+		DZA65_RS09280	0.59	-0.0
1,957,442	-		DZA65_RS09280	0.59	-0.2
1,957,442	-		DZA65_RS09280	0.59	-0.0
1,957,442	-		DZA65_RS09280	0.59	+0.3
1,957,517	-		DZA65_RS09280	0.66	-1.0
1,957,517	-		DZA65_RS09280	0.66	-1.6
1,957,769	+		DZA65_RS09280	0.87	-1.8
1,957,770	-		DZA65_RS09280	0.87	+1.4
1,957,770	-		DZA65_RS09280	0.87	+0.3
1,957,770	-		DZA65_RS09280	0.87	-0.5
1,957,770	-		DZA65_RS09280	0.87	-1.4
1,957,771	+		DZA65_RS09280	0.87	-0.1
1,957,772	-		DZA65_RS09280	0.87	-0.1
1,957,919	+				-1.0
1,957,919	+				-0.6
1,957,919	+				-1.0
1,957,919	+				-1.6
1,957,919	+				-0.8
1,957,919	+				-2.0
1,957,920	-				-1.0
1,957,920	-				-1.8
1,957,920	-				-2.7
1,957,920	-				+0.1
1,957,930	-				-1.0
1,957,946	-				-2.0
1,957,978	+				+0.1
1,957,978	+				-1.0
1,957,979	-				+1.4
1,958,057	-		DZA65_RS09285	0.10	-0.3
1,958,069	+		DZA65_RS09285	0.11	+1.2
1,958,069	+		DZA65_RS09285	0.11	-0.6
1,958,069	+		DZA65_RS09285	0.11	+0.4
1,958,070	-		DZA65_RS09285	0.11	-1.1
1,958,070	-		DZA65_RS09285	0.11	-1.2
1,958,070	-		DZA65_RS09285	0.11	-0.8
1,958,074	+				-0.6
1,958,105	+		DZA65_RS09285	0.13	-0.3
1,958,105	+		DZA65_RS09285	0.13	-0.0
1,958,106	-		DZA65_RS09285	0.13	+1.2
1,958,106	-		DZA65_RS09285	0.13	-0.3
1,958,277	+		DZA65_RS09285	0.25	+0.6
1,958,278	-		DZA65_RS09285	0.25	-1.6
1,958,278	-		DZA65_RS09285	0.25	-0.2
1,958,347	+		DZA65_RS09285	0.30	+0.2
1,958,347	+		DZA65_RS09285	0.30	+1.0
1,958,347	+		DZA65_RS09285	0.30	-1.9
1,958,347	+		DZA65_RS09285	0.30	-2.0
1,958,348	-		DZA65_RS09285	0.30	-0.7
1,958,348	-		DZA65_RS09285	0.30	+1.0
1,958,451	-		DZA65_RS09285	0.37	-0.3
1,958,451	-		DZA65_RS09285	0.37	+0.2
1,958,451	-		DZA65_RS09285	0.37	-1.8
1,958,451	-		DZA65_RS09285	0.37	+0.4
1,958,451	-		DZA65_RS09285	0.37	-0.7
1,958,459	+		DZA65_RS09285	0.38	-0.9
1,958,460	-		DZA65_RS09285	0.38	-0.4
1,958,460	-		DZA65_RS09285	0.38	-2.4
1,958,469	+		DZA65_RS09285	0.39	+0.3
1,958,469	+		DZA65_RS09285	0.39	+2.0
1,958,470	-		DZA65_RS09285	0.39	+2.4
1,958,470	-		DZA65_RS09285	0.39	+1.5
1,958,470	-		DZA65_RS09285	0.39	+0.3
1,958,470	-		DZA65_RS09285	0.39	-0.1
1,958,470	-		DZA65_RS09285	0.39	+0.8
1,958,470	-		DZA65_RS09285	0.39	-1.7
1,958,472	+		DZA65_RS09285	0.39	-0.0
1,958,473	-		DZA65_RS09285	0.39	-1.2
1,958,473	-		DZA65_RS09285	0.39	+0.4
1,958,480	-		DZA65_RS09285	0.39	+1.2
1,958,612	+		DZA65_RS09285	0.48	-0.9
1,958,612	+		DZA65_RS09285	0.48	+0.2
1,958,613	-		DZA65_RS09285	0.49	-2.2
1,958,613	-		DZA65_RS09285	0.49	-1.4
1,958,629	+		DZA65_RS09285	0.50	-0.0
1,958,629	+		DZA65_RS09285	0.50	+0.7
1,958,629	+		DZA65_RS09285	0.50	-0.8
1,958,630	-		DZA65_RS09285	0.50	-0.0
1,958,630	-		DZA65_RS09285	0.50	-1.0
1,958,630	-		DZA65_RS09285	0.50	-1.7
1,958,737	+		DZA65_RS09285	0.57	-1.4
1,958,738	-		DZA65_RS09285	0.57	+1.0
1,958,738	-		DZA65_RS09285	0.57	-1.8
1,958,800	-		DZA65_RS09285	0.61	+0.2
1,958,839	-		DZA65_RS09285	0.64	-1.0