Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS00625

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
144,193	-		DZA65_RS00620	0.63	-0.5
144,228	+		DZA65_RS00620	0.66	-1.1
144,261	+		DZA65_RS00620	0.69	+2.2
144,262	-		DZA65_RS00620	0.70	-0.1
144,463	-		DZA65_RS00620	0.89	-0.3
144,480	-				-1.7
144,525	+				+1.0
144,617	+				+0.5
144,623	-				-0.5
144,648	+				-1.1
144,649	-				-0.8
144,650	+				-0.9
144,654	+				-1.0
144,664	+				-0.4
144,665	-				-1.8
144,734	+				-0.5
144,734	+				-1.1
144,734	+				-0.8
144,734	+				-0.8
144,734	+				-2.1
144,735	-				-2.4
144,735	-				-0.3
144,738	+				-0.5
144,738	+				-3.0
144,739	-				-0.8
144,739	-				+1.2
144,739	-				-0.5
144,744	+				-0.2
144,760	-				-2.7
144,762	+				+0.6
144,763	-				+0.8
144,779	-				-0.9
144,779	-				+0.5
144,779	-				-0.0
144,779	-				-0.1
144,779	-				-0.1
144,779	-				-0.1
144,779	-				-0.3
144,779	-				-0.1
144,781	-				+1.2
144,781	-				-0.1
144,781	-				-0.2
144,781	-				+0.6
144,781	-				-0.1
144,781	-				+0.9
144,781	-				-0.5
144,781	-				-0.1
144,781	-				+0.1
144,781	-				-1.8
144,781	-				-1.7
144,781	-				+1.0
144,783	-				-3.5
144,807	+				-1.0
144,839	+				+0.2
144,839	+				-1.1
144,839	+				+0.0
144,839	+				-2.1
144,839	+				-0.1
144,847	+				+0.1
144,847	+				+0.2
144,847	+				-1.1
144,869	+				+0.2
144,870	-				-0.5
144,889	-				-1.9
144,941	+				+0.5
144,947	-				-0.3
144,947	-				+1.3
144,948	+				-0.5
144,948	+				+0.3
144,948	+				-0.7
144,948	+				-1.1
144,949	-				-1.5
144,952	+				-1.1
144,959	-				-1.4
145,067	+				+1.5
145,068	-				+1.0
145,167	-				+3.3
145,317	+		DZA65_RS00625	0.15	-0.7
145,327	-		DZA65_RS00625	0.16	+0.5
145,341	+		DZA65_RS00625	0.17	-0.6
145,348	-		DZA65_RS00625	0.18	-2.0
145,348	-		DZA65_RS00625	0.18	-0.2
145,387	-		DZA65_RS00625	0.22	+0.2
145,446	+		DZA65_RS00625	0.28	-1.2
145,567	-		DZA65_RS00625	0.40	+0.5
145,567	-		DZA65_RS00625	0.40	-0.4
145,705	+		DZA65_RS00625	0.54	-1.0
145,743	+		DZA65_RS00625	0.58	+0.0
145,750	-		DZA65_RS00625	0.58	-0.8
145,750	-		DZA65_RS00625	0.58	-0.6
145,753	-		DZA65_RS00625	0.59	-2.0
145,813	-		DZA65_RS00625	0.65	-2.3
145,813	-		DZA65_RS00625	0.65	-0.8
145,888	-		DZA65_RS00625	0.72	-0.5
145,920	-		DZA65_RS00625	0.75	-2.6
145,920	-		DZA65_RS00625	0.75	+0.5
145,920	-		DZA65_RS00625	0.75	-0.5
146,033	-		DZA65_RS00625	0.87	+0.7
146,126	+				-1.3
146,126	+				+0.3
146,127	-				-0.1
146,127	-				-1.1
146,127	-				-2.0
146,127	-				+0.9
146,128	+				-2.1
146,128	+				-0.5
146,128	+				-0.5
146,128	+				+1.0
146,128	+				-1.1
146,129	-				-2.7
146,155	-				-0.5
146,160	+				-1.1
146,161	-				-1.5
146,161	-				-2.3
146,164	+				-1.5
146,164	+				-0.1
146,165	-				+1.5
146,245	+				-1.4
146,246	-				+0.2
146,246	-				-1.8
146,255	+				-2.8
146,289	-				-1.5
146,307	+				+0.6
146,308	-				-0.8
146,308	-				+0.5
146,308	-				+0.5
146,308	-				+2.4
146,311	+				+0.2
146,312	-				-1.3
146,312	-				-0.1
146,340	+				+0.3
146,341	-				-1.3
146,341	-				+0.2
146,389	+				-2.0
146,417	+				-1.3
146,418	-				+0.2
146,421	+				-0.1
146,422	-				-1.1
146,422	-				-0.1
146,422	-				-0.8
146,442	+				-0.0
146,442	+				-1.6
146,442	+				+1.2
146,443	-				+0.2
146,443	-				+0.2
146,444	+				-0.2
146,444	+				+1.5
146,444	+				+0.3
146,444	+				+0.7
146,445	-				+0.8
146,446	+				-1.7
146,446	+				-1.3
146,446	+				+1.7
146,446	+				+0.0
146,447	-				-1.3
146,447	-				-0.8
146,447	-				+0.5
146,458	-				-2.3
146,458	-				+1.6
146,458	-				+0.2
146,509	-				-1.8
146,591	+				+0.3
146,591	+				-1.3
146,591	+				-0.8
146,591	+				-0.1
146,591	+				-0.1
146,591	+				+1.2
146,592	-				-1.2
146,592	-				-0.8
146,592	-				+0.5
146,592	-				-0.8
146,592	-				-1.5
146,592	-				-0.2
146,592	-				-0.3
146,592	-				-1.5
146,593	+				-0.8
146,593	+				-0.5
146,593	+				-0.7
146,593	+				+2.5
146,593	+				-2.1
146,593	+				-0.0
146,593	+				+0.5
146,593	+				-0.7
146,594	-				+0.2
146,594	-				-0.6
146,594	-				+0.3
146,594	-				-1.1
146,594	-				-2.3
146,594	-				-0.1
146,641	+				-0.5
146,641	+				-0.8
146,646	+				+0.5
146,646	+				-0.3
146,646	+				-0.3
146,646	+				-1.5
146,646	+				-0.9
146,647	-				+0.8
146,647	-				-0.8
146,648	+				-0.3
146,648	+				-0.2
146,648	+				+0.9
146,648	+				-0.0
146,648	+				-1.1
146,649	-				-1.6
146,649	-				-0.5
146,649	-				-0.2
146,693	+				-0.1
146,693	+				-0.4
146,693	+				-0.7
146,693	+				+2.5
146,693	+				+0.6
146,693	+				-3.2
146,694	-				+0.6
146,694	-				+1.2
146,694	-				-0.3
146,696	+				+1.0
146,696	+				-1.5
146,696	+				-1.1
146,696	+				+1.2
146,696	+				-0.5
146,696	+				-1.1
146,696	+				+1.7
146,696	+				-0.5
146,696	+				+1.0
146,696	+				-0.5
146,696	+				-0.8
146,696	+				+0.4
146,697	-				-1.4
146,697	-				-0.7
146,697	-				-0.1
146,697	-				-1.3
146,697	-				-1.1
146,697	-				-2.9
146,697	-				-1.6
146,697	-				-0.6
146,697	-				-0.2
146,697	-				+0.5
146,697	-				-1.5
146,697	-				-2.0
146,705	+				+2.5
146,706	-				-0.7
146,706	-				+0.3
146,706	-				+0.0
146,769	+				-0.3
146,769	+				+0.8
146,769	+				+1.3
146,769	+				+1.0
146,770	-				-0.8
146,770	-				-2.4
146,770	-				-1.7
146,770	-				-1.0
146,849	+		DZA65_RS00630	0.11	+0.8
146,849	+		DZA65_RS00630	0.11	-2.0
146,917	-		DZA65_RS00630	0.16	-2.0
146,917	-		DZA65_RS00630	0.16	+1.3
146,964	+		DZA65_RS00630	0.20	-0.1
146,964	+		DZA65_RS00630	0.20	+0.2
146,965	-		DZA65_RS00630	0.20	-1.8
146,965	-		DZA65_RS00630	0.20	-0.3
146,965	-		DZA65_RS00630	0.20	-0.5
146,977	+		DZA65_RS00630	0.21	-0.8
146,977	+		DZA65_RS00630	0.21	-0.6
146,978	-		DZA65_RS00630	0.21	+0.9
146,978	-		DZA65_RS00630	0.21	-0.1
147,024	+		DZA65_RS00630	0.24	+0.8
147,024	+		DZA65_RS00630	0.24	-2.0
147,024	+		DZA65_RS00630	0.24	+0.5
147,024	+		DZA65_RS00630	0.24	+4.1
147,024	+		DZA65_RS00630	0.24	-0.8
147,024	+		DZA65_RS00630	0.24	-0.3
147,024	+		DZA65_RS00630	0.24	-0.5
147,025	-		DZA65_RS00630	0.25	+0.9
147,025	-		DZA65_RS00630	0.25	+0.1
147,025	-		DZA65_RS00630	0.25	-0.7
147,025	-		DZA65_RS00630	0.25	+1.5
147,025	-		DZA65_RS00630	0.25	+1.8
147,025	-		DZA65_RS00630	0.25	-0.5
147,025	-		DZA65_RS00630	0.25	-1.3
147,025	-		DZA65_RS00630	0.25	-1.1
147,025	-		DZA65_RS00630	0.25	-2.0
147,025	-		DZA65_RS00630	0.25	+1.1
147,025	-		DZA65_RS00630	0.25	+0.6
147,066	-		DZA65_RS00630	0.28	+1.7
147,162	+		DZA65_RS00630	0.35	-0.1