Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22095

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
4,775,642	+		DZA65_RS22090	0.26	+2.8
4,775,690	+		DZA65_RS22090	0.32	-1.1
4,775,690	+		DZA65_RS22090	0.32	-1.9
4,775,805	-		DZA65_RS22090	0.45	+0.1
4,775,985	+		DZA65_RS22090	0.66	-0.8
4,775,986	-		DZA65_RS22090	0.66	+0.4
4,776,045	-		DZA65_RS22090	0.73	-1.2
4,776,129	+		DZA65_RS22090	0.83	-0.7
4,776,133	+		DZA65_RS22090	0.84	-0.5
4,776,134	-		DZA65_RS22090	0.84	+0.5
4,776,153	+				-1.6
4,776,154	-		DZA65_RS22090	0.86	-1.0
4,776,166	+		DZA65_RS22090	0.88	+0.2
4,776,166	+		DZA65_RS22090	0.88	+0.9
4,776,166	+		DZA65_RS22090	0.88	-0.1
4,776,166	+		DZA65_RS22090	0.88	+0.3
4,776,166	+		DZA65_RS22090	0.88	+0.6
4,776,167	-		DZA65_RS22090	0.88	-1.2
4,776,167	-		DZA65_RS22090	0.88	-1.7
4,776,167	-		DZA65_RS22090	0.88	-0.6
4,776,168	+		DZA65_RS22090	0.88	+1.3
4,776,169	-		DZA65_RS22090	0.88	-1.2
4,776,169	-		DZA65_RS22090	0.88	+0.8
4,776,169	-		DZA65_RS22090	0.88	+1.5
4,776,169	-		DZA65_RS22090	0.88	+0.5
4,776,190	+				-1.2
4,776,190	+				+0.1
4,776,190	+				-0.1
4,776,191	-				-0.0
4,776,192	+				+0.3
4,776,192	+				-1.2
4,776,192	+				-0.9
4,776,193	-				-1.1
4,776,193	-				-1.2
4,776,193	-				+1.4
4,776,193	-				+0.2
4,776,193	-				-0.5
4,776,193	-				+0.1
4,776,253	+				+1.1
4,776,254	-				-1.2
4,776,254	-				-1.2
4,776,299	-				-1.1
4,776,302	+				-1.2
4,776,302	+				-1.9
4,776,303	-				-0.9
4,776,311	+				+1.5
4,776,316	+				+1.4
4,776,316	+				-1.5
4,776,353	+				-0.5
4,776,353	+				-0.5
4,776,353	+				+0.5
4,776,353	+				-0.7
4,776,353	+				-0.9
4,776,354	-				+0.8
4,776,354	-				-0.6
4,776,354	-				-0.5
4,776,354	-				+0.3
4,776,357	-				-0.5
4,776,357	-				+0.6
4,776,371	-				-1.2
4,776,371	-				-1.1
4,776,414	+				-1.9
4,776,415	-				-2.2
4,776,497	+				-0.2
4,776,498	-				-0.7
4,776,517	+				-0.9
4,776,518	-				-0.9
4,776,521	+				+0.1
4,776,522	-				+0.2
4,776,522	-				+0.2
4,776,549	+				+0.1
4,776,550	-				-1.7
4,776,550	-				-0.7
4,776,550	-				-2.7
4,776,550	-				-1.2
4,776,550	-				+0.1
4,776,550	-				+1.1
4,776,554	-				-0.4
4,776,554	-				-1.7
4,776,554	-				+1.3
4,776,554	-				-0.5
4,776,563	-				+0.5
4,776,563	-				-0.9
4,776,613	+				-1.1
4,776,613	+				-1.4
4,776,613	+				-1.7
4,776,613	+				+0.1
4,776,613	+				-1.9
4,776,614	-				-1.2
4,776,614	-				-0.9
4,776,614	-				+0.3
4,776,614	-				-1.2
4,776,628	+				-0.7
4,776,628	+				-1.7
4,776,628	+				+1.1
4,776,628	+				-2.2
4,776,628	+				+0.5
4,776,628	+				+1.3
4,776,628	+				+0.4
4,776,628	+				+0.6
4,776,628	+				+0.6
4,776,628	+				-1.3
4,776,628	+				-0.4
4,776,628	+				-0.3
4,776,629	-				-1.9
4,776,629	-				+0.1
4,776,629	-				-1.4
4,776,629	-				-1.3
4,776,629	-				-0.9
4,776,629	-				+0.1
4,776,629	-				-0.6
4,776,629	-				-1.0
4,776,629	-				+0.3
4,776,629	-				-0.5
4,776,629	-				-0.2
4,776,629	-				-0.7
4,776,629	-				-0.7
4,776,629	-				-0.7
4,776,629	-				+0.4
4,776,629	-				+0.7
4,776,629	-				-0.0
4,776,629	-				+1.4
4,776,633	+				-0.4
4,776,633	+				+2.7
4,776,633	+				-0.7
4,776,634	-				-0.9
4,776,634	-				-0.5
4,776,634	-				-1.8
4,776,634	-				-1.7
4,776,741	+				-0.2
4,776,741	+				-1.9
4,776,742	-				-0.5
4,776,742	-				+0.2
4,776,742	-				-0.5
4,776,742	-				+0.4
4,776,857	+		DZA65_RS22095	0.18	+0.7
4,776,873	+		DZA65_RS22095	0.19	-0.2
4,776,874	-		DZA65_RS22095	0.19	-0.5
4,776,874	-		DZA65_RS22095	0.19	-0.7
4,776,884	+		DZA65_RS22095	0.20	+0.8
4,776,884	+		DZA65_RS22095	0.20	+1.1
4,776,885	-		DZA65_RS22095	0.20	+0.1
4,776,885	-		DZA65_RS22095	0.20	+0.1
4,776,885	-		DZA65_RS22095	0.20	+0.6
4,776,896	+		DZA65_RS22095	0.21	-0.9
4,777,011	+		DZA65_RS22095	0.30	-1.2
4,777,334	+		DZA65_RS22095	0.55	+0.5
4,777,335	-		DZA65_RS22095	0.55	+0.1
4,777,342	+		DZA65_RS22095	0.56	-3.1
4,777,342	+		DZA65_RS22095	0.56	+0.1
4,777,343	-		DZA65_RS22095	0.56	+0.2
4,777,427	+		DZA65_RS22095	0.62	-0.7
4,777,427	+		DZA65_RS22095	0.62	+0.6
4,777,427	+		DZA65_RS22095	0.62	-0.8
4,777,427	+		DZA65_RS22095	0.62	+0.5
4,777,427	+		DZA65_RS22095	0.62	+2.1
4,777,427	+		DZA65_RS22095	0.62	-1.5
4,777,428	-		DZA65_RS22095	0.62	-0.5
4,777,451	+		DZA65_RS22095	0.64	-1.5
4,777,451	+		DZA65_RS22095	0.64	+2.1
4,777,452	-		DZA65_RS22095	0.64	+0.5
4,777,452	-		DZA65_RS22095	0.64	+0.6
4,777,452	-		DZA65_RS22095	0.64	-0.1
4,777,476	+		DZA65_RS22095	0.66	-2.1
4,777,491	+		DZA65_RS22095	0.67	-1.1
4,777,491	+		DZA65_RS22095	0.67	+0.1
4,777,491	+		DZA65_RS22095	0.67	-0.3
4,777,492	-		DZA65_RS22095	0.67	-2.7
4,777,492	-		DZA65_RS22095	0.67	+1.1
4,777,492	-		DZA65_RS22095	0.67	-0.5
4,777,492	-		DZA65_RS22095	0.67	-0.5
4,777,492	-		DZA65_RS22095	0.67	-1.7
4,777,492	-		DZA65_RS22095	0.67	+0.7
4,777,553	+		DZA65_RS22095	0.72	+1.6
4,777,553	+		DZA65_RS22095	0.72	+0.1
4,777,553	+		DZA65_RS22095	0.72	-0.5
4,777,553	+		DZA65_RS22095	0.72	-1.6
4,777,553	+		DZA65_RS22095	0.72	+0.9
4,777,553	+		DZA65_RS22095	0.72	-1.1
4,777,553	+		DZA65_RS22095	0.72	-2.6
4,777,554	-		DZA65_RS22095	0.72	-3.4
4,777,554	-		DZA65_RS22095	0.72	+0.3
4,777,554	-		DZA65_RS22095	0.72	-0.9
4,777,554	-		DZA65_RS22095	0.72	-3.4
4,777,554	-		DZA65_RS22095	0.72	-1.4
4,777,554	-		DZA65_RS22095	0.72	-0.6
4,777,657	+		DZA65_RS22095	0.80	-0.5
4,777,657	+		DZA65_RS22095	0.80	-0.2
4,777,657	+		DZA65_RS22095	0.80	+1.8
4,777,657	+		DZA65_RS22095	0.80	-0.5
4,777,657	+		DZA65_RS22095	0.80	-1.5
4,777,657	+		DZA65_RS22095	0.80	-2.8
4,777,657	+		DZA65_RS22095	0.80	-0.9
4,777,658	-		DZA65_RS22095	0.80	-1.4
4,777,658	-		DZA65_RS22095	0.80	-0.5
4,777,658	-		DZA65_RS22095	0.80	-0.5
4,777,658	-		DZA65_RS22095	0.80	-0.6
4,777,658	-		DZA65_RS22095	0.80	-1.2
4,777,709	+		DZA65_RS22095	0.84	+0.0
4,777,709	+		DZA65_RS22095	0.84	-0.1
4,777,709	+		DZA65_RS22095	0.84	-0.9
4,777,709	+		DZA65_RS22095	0.84	+0.1
4,777,709	+		DZA65_RS22095	0.84	+0.1
4,777,709	+		DZA65_RS22095	0.84	-1.7
4,777,710	-		DZA65_RS22095	0.84	+0.1
4,777,710	-		DZA65_RS22095	0.84	-0.7
4,777,710	-		DZA65_RS22095	0.84	+1.5
4,777,710	-		DZA65_RS22095	0.84	-0.9
4,777,710	-		DZA65_RS22095	0.84	-0.9
4,777,750	+		DZA65_RS22095	0.88	-0.0
4,777,751	-		DZA65_RS22095	0.88	-1.9
4,777,907	+				+0.5
4,777,907	+				-1.2
4,777,907	+				+0.1
4,777,908	-				-0.0
4,777,908	-				-1.5
4,777,910	+				-0.1
4,777,910	+				-1.0
4,777,910	+				+2.1
4,777,910	+				+0.9
4,777,910	+				-0.8
4,777,910	+				-0.4
4,777,910	+				+0.5
4,777,910	+				-0.6
4,777,910	+				-2.6
4,777,911	-				+0.1
4,777,911	-				+0.5
4,777,911	-				+0.7
4,777,911	-				-2.1
4,777,911	-				-1.4
4,777,911	-				+1.8
4,777,911	-				-1.9
4,777,911	-				+1.3
4,777,911	-				-1.5
4,777,911	-				+0.5
4,777,911	-				+0.5
4,777,911	-				+1.5
4,777,911	-				+0.1
4,777,914	+				-0.7
4,777,914	+				+0.6
4,777,914	+				-0.9
4,777,914	+				+2.3
4,777,914	+				-1.5
4,777,915	-				-1.2
4,777,915	-				-1.2
4,777,915	-				+0.3
4,777,933	+				-2.0
4,777,933	+				-1.1
4,777,963	-				-1.7
4,778,089	+		DZA65_RS22100	0.11	+1.7
4,778,089	+		DZA65_RS22100	0.11	+0.5
4,778,090	-		DZA65_RS22100	0.11	-0.9
4,778,107	+		DZA65_RS22100	0.12	+1.5
4,778,108	-		DZA65_RS22100	0.13	-1.2
4,778,108	-		DZA65_RS22100	0.13	-2.6
4,778,108	-		DZA65_RS22100	0.13	+0.1
4,778,108	-		DZA65_RS22100	0.13	-0.9
4,778,143	-		DZA65_RS22100	0.16	-0.2
4,778,143	-		DZA65_RS22100	0.16	+0.7
4,778,143	-		DZA65_RS22100	0.16	+0.9
4,778,195	+		DZA65_RS22100	0.20	-0.4
4,778,195	+		DZA65_RS22100	0.20	-0.3
4,778,196	-		DZA65_RS22100	0.20	-1.2
4,778,196	-		DZA65_RS22100	0.20	-2.9
4,778,241	-		DZA65_RS22100	0.24	+0.7
4,778,241	-		DZA65_RS22100	0.24	-0.4
4,778,409	+		DZA65_RS22100	0.38	+1.5
4,778,409	+		DZA65_RS22100	0.38	+0.5
4,778,410	-		DZA65_RS22100	0.38	-1.2
4,778,410	-		DZA65_RS22100	0.38	-1.1
4,778,410	-		DZA65_RS22100	0.38	+1.4
4,778,410	-		DZA65_RS22100	0.38	+0.9
4,778,437	+		DZA65_RS22100	0.41	+0.3
4,778,453	+		DZA65_RS22100	0.42	-0.4
4,778,453	+		DZA65_RS22100	0.42	+1.9
4,778,453	+		DZA65_RS22100	0.42	-0.3
4,778,453	+		DZA65_RS22100	0.42	-1.1
4,778,453	+		DZA65_RS22100	0.42	-1.5
4,778,454	-		DZA65_RS22100	0.42	-0.8
4,778,454	-		DZA65_RS22100	0.42	-1.2
4,778,454	-		DZA65_RS22100	0.42	-0.9
4,778,454	-		DZA65_RS22100	0.42	+0.3
4,778,560	+		DZA65_RS22100	0.51	-0.3
4,778,560	+		DZA65_RS22100	0.51	-0.1
4,778,560	+		DZA65_RS22100	0.51	-0.5
4,778,561	-		DZA65_RS22100	0.51	-0.2
4,778,561	-		DZA65_RS22100	0.51	-0.2
4,778,561	-		DZA65_RS22100	0.51	+0.1