Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07785

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
1,623,711	-				-2.0
1,623,755	+				-0.2
1,623,811	-		DZA65_RS07785	0.10	-0.4
1,623,812	+		DZA65_RS07785	0.10	+1.0
1,623,812	+		DZA65_RS07785	0.10	+0.9
1,623,813	-		DZA65_RS07785	0.10	-0.2
1,623,813	-		DZA65_RS07785	0.10	+0.7
1,623,828	+		DZA65_RS07785	0.11	-0.9
1,623,829	-		DZA65_RS07785	0.11	-2.4
1,623,829	-		DZA65_RS07785	0.11	-0.2
1,623,832	-		DZA65_RS07785	0.12	-1.0
1,623,832	-		DZA65_RS07785	0.12	-0.4
1,623,843	-		DZA65_RS07785	0.13	-2.5
1,623,843	-		DZA65_RS07785	0.13	+1.2
1,623,846	-		DZA65_RS07785	0.13	+0.8
1,623,846	-		DZA65_RS07785	0.13	+0.7
1,623,846	-		DZA65_RS07785	0.13	-0.2
1,623,846	-		DZA65_RS07785	0.13	+1.0
1,623,846	-		DZA65_RS07785	0.13	-0.8
1,623,856	+		DZA65_RS07785	0.14	+0.4
1,623,950	-		DZA65_RS07785	0.22	-0.3
1,623,950	-		DZA65_RS07785	0.22	+0.1
1,623,959	+		DZA65_RS07785	0.22	+1.1
1,623,960	-				-1.2
1,623,960	-		DZA65_RS07785	0.22	+2.1
1,623,960	-		DZA65_RS07785	0.22	+0.8
1,623,979	+		DZA65_RS07785	0.24	-3.1
1,623,979	+		DZA65_RS07785	0.24	-1.5
1,623,979	+		DZA65_RS07785	0.24	-0.5
1,623,979	+		DZA65_RS07785	0.24	-0.8
1,623,980	-		DZA65_RS07785	0.24	-0.5
1,623,980	-		DZA65_RS07785	0.24	-0.2
1,623,980	-		DZA65_RS07785	0.24	-0.6
1,623,980	-		DZA65_RS07785	0.24	+0.4
1,623,980	-		DZA65_RS07785	0.24	-0.0
1,623,986	+		DZA65_RS07785	0.24	+1.3
1,623,987	-		DZA65_RS07785	0.25	+1.1
1,624,003	+		DZA65_RS07785	0.26	-0.2
1,624,003	+		DZA65_RS07785	0.26	+0.5
1,624,003	+		DZA65_RS07785	0.26	-0.6
1,624,003	+		DZA65_RS07785	0.26	-2.2
1,624,004	-		DZA65_RS07785	0.26	-3.3
1,624,033	+		DZA65_RS07785	0.28	-1.2
1,624,161	-		DZA65_RS07785	0.39	-1.2
1,624,182	-		DZA65_RS07785	0.41	-0.1
1,624,206	-		DZA65_RS07785	0.43	+0.3
1,624,207	+		DZA65_RS07785	0.43	-1.8
1,624,207	+		DZA65_RS07785	0.43	-1.2
1,624,207	+		DZA65_RS07785	0.43	+0.8
1,624,207	+		DZA65_RS07785	0.43	+0.2
1,624,208	-		DZA65_RS07785	0.43	-0.1
1,624,208	-		DZA65_RS07785	0.43	-1.8
1,624,208	-		DZA65_RS07785	0.43	+1.7
1,624,208	-		DZA65_RS07785	0.43	-1.0
1,624,208	-		DZA65_RS07785	0.43	-1.8
1,624,208	-		DZA65_RS07785	0.43	-2.0
1,624,208	-		DZA65_RS07785	0.43	-0.4
1,624,274	+		DZA65_RS07785	0.48	-1.1
1,624,275	-		DZA65_RS07785	0.48	+0.5
1,624,275	-		DZA65_RS07785	0.48	-0.2
1,624,275	-		DZA65_RS07785	0.48	+0.2
1,624,275	-		DZA65_RS07785	0.48	-1.2
1,624,372	+		DZA65_RS07785	0.56	-0.7
1,624,372	+		DZA65_RS07785	0.56	-0.0
1,624,399	-		DZA65_RS07785	0.59	-1.8
1,624,399	-		DZA65_RS07785	0.59	+1.2
1,624,408	-		DZA65_RS07785	0.59	-0.5
1,624,408	-		DZA65_RS07785	0.59	-0.0
1,624,433	+		DZA65_RS07785	0.61	-2.5
1,624,452	-		DZA65_RS07785	0.63	+0.1
1,624,470	-		DZA65_RS07785	0.65	-0.0
1,624,474	-		DZA65_RS07785	0.65	+0.8
1,624,474	-				-1.2
1,624,540	+		DZA65_RS07785	0.70	+0.7
1,624,540	+		DZA65_RS07785	0.70	-0.4
1,624,540	+		DZA65_RS07785	0.70	-1.5
1,624,541	-		DZA65_RS07785	0.70	-0.5
1,624,541	-		DZA65_RS07785	0.70	+0.0
1,624,541	-		DZA65_RS07785	0.70	-0.6
1,624,541	-		DZA65_RS07785	0.70	-0.5
1,624,541	-		DZA65_RS07785	0.70	-0.3
1,624,541	-		DZA65_RS07785	0.70	-2.5
1,624,541	-		DZA65_RS07785	0.70	+1.2
1,624,545	+		DZA65_RS07785	0.71	-1.0
1,624,569	+		DZA65_RS07785	0.73	+1.2
1,624,569	+		DZA65_RS07785	0.73	-1.2
1,624,570	-		DZA65_RS07785	0.73	+0.8
1,624,575	+		DZA65_RS07785	0.73	-0.2
1,624,575	+		DZA65_RS07785	0.73	-0.9
1,624,576	-		DZA65_RS07785	0.73	-1.2
1,624,576	-		DZA65_RS07785	0.73	-2.4
1,624,576	-		DZA65_RS07785	0.73	-1.3
1,624,576	-		DZA65_RS07785	0.73	-1.8
1,624,578	+		DZA65_RS07785	0.73	-0.9
1,624,716	-		DZA65_RS07785	0.85	-1.1
1,624,716	-		DZA65_RS07785	0.85	-0.9
1,624,731	-		DZA65_RS07785	0.86	-0.4
1,624,737	+		DZA65_RS07785	0.87	-1.0
1,624,738	-		DZA65_RS07785	0.87	-1.4
1,624,738	-		DZA65_RS07785	0.87	+0.4
1,624,738	-		DZA65_RS07785	0.87	-2.5
1,624,754	-		DZA65_RS07785	0.88	-0.0
1,624,754	-		DZA65_RS07785	0.88	+0.1
1,624,829	+				+1.4
1,624,829	+				+1.9
1,624,830	-				+0.5
1,624,830	-				-1.2
1,624,922	-				-0.6
1,624,922	-				-2.7
1,624,922	-				-1.2
1,624,922	-				-2.2
1,624,922	-				-0.5
1,624,922	-				-0.6
1,624,922	-				-1.9
1,624,922	-				+0.8
1,624,934	+				-1.7
1,624,935	-				-0.8
1,624,935	-				-1.7
1,624,935	-				+0.5
1,624,935	-				-2.2
1,624,935	-				-0.5
1,624,935	-				-1.2
1,624,935	-				-1.3
1,624,935	-				-1.8
1,624,979	+				-2.5
1,624,980	-				+0.1
1,624,980	-				-1.1
1,624,993	-				-0.6
1,624,993	-				-1.3
1,625,007	+				+0.6
1,625,007	+				+0.6
1,625,008	-				+2.3
1,625,008	-				+1.5
1,625,034	+				-1.2
1,625,034	+				+0.2
1,625,035	-				+0.4
1,625,040	+				+1.5
1,625,040	+				-0.4
1,625,040	+				+0.8
1,625,040	+				+1.1
1,625,040	+				-1.1
1,625,040	+				-1.6
1,625,040	+				+3.3
1,625,041	-				-0.4
1,625,041	-				-2.5
1,625,041	-				-1.5
1,625,041	-				+1.1
1,625,041	-				-1.2
1,625,047	-				+0.5
1,625,058	+				+2.4
1,625,058	+				+1.5
1,625,058	+				+1.6
1,625,058	+				-0.2
1,625,058	+				-1.2
1,625,070	+				+0.6
1,625,071	-				+0.3
1,625,076	+				-0.2
1,625,076	+				+0.1
1,625,076	+				-1.5
1,625,076	+				+0.5
1,625,076	+				-0.3
1,625,076	+				+0.4
1,625,077	-				+0.8
1,625,077	-				+0.8
1,625,077	-				-0.6
1,625,077	-				-0.4
1,625,077	-				+0.5
1,625,088	+				-1.2
1,625,098	+				-1.4
1,625,099	-				-2.5
1,625,099	-				+0.7
1,625,099	-				-0.5
1,625,099	-				+0.4
1,625,112	-				-0.1
1,625,112	-				-2.2
1,625,112	-				-1.6
1,625,140	+				+1.4
1,625,140	+				-0.2
1,625,140	+				-0.2
1,625,140	+				-2.2
1,625,140	+				+0.8
1,625,140	+				+1.2
1,625,140	+				-1.2
1,625,140	+				+0.6
1,625,141	-				-1.5
1,625,141	-				-1.2
1,625,141	-				+0.4
1,625,141	-				+3.0
1,625,143	+				+0.5
1,625,154	+				+0.8
1,625,154	+				+0.9
1,625,154	+				+0.2
1,625,154	+				+0.4
1,625,154	+				+0.2
1,625,154	+				+0.1
1,625,154	+				-2.0
1,625,155	-				-0.5
1,625,155	-				-1.0
1,625,155	-				-2.5
1,625,155	-				-1.0
1,625,155	-				-0.8
1,625,155	-				-0.2
1,625,155	-				-0.9
1,625,155	-				+0.5
1,625,155	-				-0.2
1,625,155	-				+0.4
1,625,155	-				+0.8
1,625,155	-				-0.8
1,625,218	-				-2.0
1,625,218	-				-0.9
1,625,239	+				+0.8
1,625,265	+				+1.9
1,625,265	+				+0.8
1,625,266	-				-0.2
1,625,266	-				+1.3
1,625,273	+				+0.1
1,625,273	+				-1.5
1,625,273	+				+0.4
1,625,274	-				+0.8
1,625,274	-				-2.4
1,625,280	+				-0.7
1,625,280	+				-1.5
1,625,280	+				+0.9
1,625,280	+				+0.8
1,625,281	-				-0.7
1,625,281	-				-1.5
1,625,281	-				-0.5
1,625,281	-				-0.9
1,625,281	-				+1.2
1,625,337	+				-1.1
1,625,337	+				-0.8
1,625,338	-				+1.2
1,625,363	+				-2.1
1,625,363	+				+0.2
1,625,387	-				-0.3
1,625,409	+				-2.0
1,625,409	+				+1.1
1,625,409	+				-0.2
1,625,409	+				+0.4
1,625,409	+				+0.8
1,625,409	+				+0.1
1,625,409	+				-0.3
1,625,409	+				+0.2
1,625,410	-				-1.8
1,625,410	-				+0.8
1,625,410	-				-1.0
1,625,418	+				-0.8
1,625,418	+				-0.9
1,625,418	+				-1.0
1,625,419	-				+0.2
1,625,419	-				-0.3
1,625,419	-				-0.7
1,625,613	+		DZA65_RS07790	0.18	+2.0
1,625,614	-		DZA65_RS07790	0.19	-1.2
1,625,614	-		DZA65_RS07790	0.19	+1.5
1,625,614	-		DZA65_RS07790	0.19	-2.4
1,625,742	+		DZA65_RS07790	0.24	+0.4
1,625,742	+		DZA65_RS07790	0.24	+0.5
1,625,743	-		DZA65_RS07790	0.25	-0.5
1,625,793	+		DZA65_RS07790	0.27	+1.1
1,625,794	-		DZA65_RS07790	0.27	+0.8
1,625,794	-		DZA65_RS07790	0.27	+0.5
1,625,794	-		DZA65_RS07790	0.27	+0.8
1,625,818	-		DZA65_RS07790	0.28	+0.8
1,625,832	+		DZA65_RS07790	0.29	-0.5
1,625,832	+		DZA65_RS07790	0.29	+0.7
1,625,832	+		DZA65_RS07790	0.29	+0.1
1,625,832	+		DZA65_RS07790	0.29	-1.5
1,625,832	+		DZA65_RS07790	0.29	+1.8
1,625,833	-		DZA65_RS07790	0.29	+0.7
1,625,833	-		DZA65_RS07790	0.29	-1.2
1,625,833	-		DZA65_RS07790	0.29	-1.7
1,625,833	-		DZA65_RS07790	0.29	-0.8
1,625,833	-		DZA65_RS07790	0.29	+0.6
1,625,833	-		DZA65_RS07790	0.29	-2.2
1,625,834	+		DZA65_RS07790	0.29	+0.2
1,625,834	+		DZA65_RS07790	0.29	+1.0
1,625,834	+		DZA65_RS07790	0.29	-1.5
1,625,834	+		DZA65_RS07790	0.29	-1.2
1,625,835	-		DZA65_RS07790	0.29	-0.0
1,625,835	-		DZA65_RS07790	0.29	-0.9
1,625,883	+		DZA65_RS07790	0.31	-1.2
1,625,883	+		DZA65_RS07790	0.31	-2.1
1,625,883	+		DZA65_RS07790	0.31	-1.5
1,625,883	+		DZA65_RS07790	0.31	-0.8
1,625,883	+		DZA65_RS07790	0.31	-1.2
1,625,883	+		DZA65_RS07790	0.31	-0.4
1,625,883	+		DZA65_RS07790	0.31	-0.5
1,625,883	+		DZA65_RS07790	0.31	-0.1
1,625,884	-		DZA65_RS07790	0.31	-1.5
1,625,884	-		DZA65_RS07790	0.31	-0.8
1,625,884	-		DZA65_RS07790	0.31	+2.8