Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22520

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
4,867,938	+		DZA65_RS22515	0.25	+1.1
4,867,938	+		DZA65_RS22515	0.25	-1.0
4,867,985	+		DZA65_RS22515	0.29	-1.1
4,867,985	+		DZA65_RS22515	0.29	-3.5
4,867,985	+		DZA65_RS22515	0.29	+0.4
4,867,985	+		DZA65_RS22515	0.29	-0.8
4,867,985	+		DZA65_RS22515	0.29	+1.2
4,867,985	+		DZA65_RS22515	0.29	+0.7
4,867,985	+		DZA65_RS22515	0.29	+0.8
4,867,986	-		DZA65_RS22515	0.29	+0.2
4,867,986	-		DZA65_RS22515	0.29	-0.2
4,867,986	-		DZA65_RS22515	0.29	-1.1
4,868,012	+		DZA65_RS22515	0.31	-1.8
4,868,012	+		DZA65_RS22515	0.31	-0.2
4,868,012	+		DZA65_RS22515	0.31	+1.7
4,868,012	+		DZA65_RS22515	0.31	-1.8
4,868,012	+		DZA65_RS22515	0.31	-2.6
4,868,012	+		DZA65_RS22515	0.31	-1.6
4,868,012	+		DZA65_RS22515	0.31	-1.8
4,868,012	+		DZA65_RS22515	0.31	+0.1
4,868,012	+		DZA65_RS22515	0.31	-2.8
4,868,013	-		DZA65_RS22515	0.31	-1.2
4,868,013	-		DZA65_RS22515	0.31	+0.2
4,868,013	-		DZA65_RS22515	0.31	+0.6
4,868,013	-		DZA65_RS22515	0.31	+0.2
4,868,013	-		DZA65_RS22515	0.31	+1.1
4,868,013	-		DZA65_RS22515	0.31	-2.2
4,868,013	-		DZA65_RS22515	0.31	-0.8
4,868,013	-		DZA65_RS22515	0.31	-0.3
4,868,013	-		DZA65_RS22515	0.31	-0.1
4,868,013	-		DZA65_RS22515	0.31	-0.4
4,868,028	+		DZA65_RS22515	0.33	-0.6
4,868,028	+		DZA65_RS22515	0.33	-0.4
4,868,028	+		DZA65_RS22515	0.33	-1.3
4,868,028	+		DZA65_RS22515	0.33	+1.5
4,868,028	+		DZA65_RS22515	0.33	+0.2
4,868,028	+		DZA65_RS22515	0.33	-0.1
4,868,028	+		DZA65_RS22515	0.33	-0.1
4,868,028	+		DZA65_RS22515	0.33	-0.5
4,868,028	+		DZA65_RS22515	0.33	-0.3
4,868,028	+		DZA65_RS22515	0.33	+0.7
4,868,028	+		DZA65_RS22515	0.33	-0.1
4,868,028	+		DZA65_RS22515	0.33	-0.5
4,868,028	+		DZA65_RS22515	0.33	+0.5
4,868,028	+		DZA65_RS22515	0.33	-2.1
4,868,028	+		DZA65_RS22515	0.33	+0.7
4,868,028	+		DZA65_RS22515	0.33	-0.9
4,868,028	+		DZA65_RS22515	0.33	-0.3
4,868,028	+		DZA65_RS22515	0.33	-1.3
4,868,028	+		DZA65_RS22515	0.33	-0.8
4,868,028	+		DZA65_RS22515	0.33	+0.7
4,868,028	+		DZA65_RS22515	0.33	-0.1
4,868,028	+		DZA65_RS22515	0.33	+0.9
4,868,028	+		DZA65_RS22515	0.33	+0.1
4,868,028	+		DZA65_RS22515	0.33	-1.2
4,868,028	+		DZA65_RS22515	0.33	-1.5
4,868,028	+		DZA65_RS22515	0.33	+0.0
4,868,028	+		DZA65_RS22515	0.33	-0.2
4,868,028	+		DZA65_RS22515	0.33	-1.2
4,868,028	+		DZA65_RS22515	0.33	+2.2
4,868,028	+		DZA65_RS22515	0.33	+0.2
4,868,028	+		DZA65_RS22515	0.33	+0.8
4,868,028	+		DZA65_RS22515	0.33	-0.8
4,868,028	+		DZA65_RS22515	0.33	+1.4
4,868,029	-		DZA65_RS22515	0.33	-2.4
4,868,029	-		DZA65_RS22515	0.33	+0.1
4,868,029	-		DZA65_RS22515	0.33	-0.1
4,868,029	-		DZA65_RS22515	0.33	-1.3
4,868,029	-		DZA65_RS22515	0.33	-0.3
4,868,029	-		DZA65_RS22515	0.33	-3.1
4,868,029	-		DZA65_RS22515	0.33	-0.2
4,868,029	-		DZA65_RS22515	0.33	-0.8
4,868,029	-		DZA65_RS22515	0.33	-0.5
4,868,029	-		DZA65_RS22515	0.33	+0.2
4,868,029	-		DZA65_RS22515	0.33	-0.3
4,868,029	-		DZA65_RS22515	0.33	+1.2
4,868,029	-		DZA65_RS22515	0.33	-1.3
4,868,029	-		DZA65_RS22515	0.33	-1.8
4,868,029	-		DZA65_RS22515	0.33	-0.3
4,868,029	-		DZA65_RS22515	0.33	-1.2
4,868,029	-		DZA65_RS22515	0.33	-1.1
4,868,029	-		DZA65_RS22515	0.33	+0.0
4,868,029	-		DZA65_RS22515	0.33	-1.8
4,868,029	-		DZA65_RS22515	0.33	+1.2
4,868,029	-		DZA65_RS22515	0.33	+0.6
4,868,029	-		DZA65_RS22515	0.33	+0.5
4,868,029	-		DZA65_RS22515	0.33	+1.5
4,868,029	-		DZA65_RS22515	0.33	-0.3
4,868,117	+		DZA65_RS22515	0.40	-2.8
4,868,117	+		DZA65_RS22515	0.40	-0.1
4,868,117	+		DZA65_RS22515	0.40	-0.3
4,868,118	-		DZA65_RS22515	0.40	+0.0
4,868,118	-		DZA65_RS22515	0.40	+0.1
4,868,118	-		DZA65_RS22515	0.40	-2.2
4,868,118	-		DZA65_RS22515	0.40	-0.3
4,868,118	-		DZA65_RS22515	0.40	-1.3
4,868,118	-		DZA65_RS22515	0.40	-1.6
4,868,137	+		DZA65_RS22515	0.42	-0.3
4,868,138	-		DZA65_RS22515	0.42	-0.3
4,868,138	-		DZA65_RS22515	0.42	-1.3
4,868,142	+		DZA65_RS22515	0.42	-1.8
4,868,142	+		DZA65_RS22515	0.42	+0.5
4,868,143	-		DZA65_RS22515	0.42	+0.2
4,868,143	-		DZA65_RS22515	0.42	+2.2
4,868,143	-		DZA65_RS22515	0.42	-0.8
4,868,143	-				+0.4
4,868,143	-		DZA65_RS22515	0.42	+0.2
4,868,143	-		DZA65_RS22515	0.42	-2.5
4,868,386	-		DZA65_RS22515	0.62	-2.1
4,868,429	+		DZA65_RS22515	0.65	-1.6
4,868,429	+		DZA65_RS22515	0.65	+2.0
4,868,429	+		DZA65_RS22515	0.65	-2.3
4,868,429	+		DZA65_RS22515	0.65	+0.6
4,868,429	+		DZA65_RS22515	0.65	-1.3
4,868,430	-		DZA65_RS22515	0.65	+1.2
4,868,430	-		DZA65_RS22515	0.65	-0.3
4,868,430	-		DZA65_RS22515	0.65	-1.7
4,868,430	-		DZA65_RS22515	0.65	-0.2
4,868,430	-		DZA65_RS22515	0.65	-0.3
4,868,433	-		DZA65_RS22515	0.66	+0.0
4,868,465	+		DZA65_RS22515	0.68	-0.4
4,868,465	+				-1.9
4,868,466	-		DZA65_RS22515	0.68	+0.7
4,868,514	+		DZA65_RS22515	0.72	-0.9
4,868,514	+		DZA65_RS22515	0.72	+0.4
4,868,514	+		DZA65_RS22515	0.72	+0.6
4,868,514	+		DZA65_RS22515	0.72	-0.1
4,868,515	-		DZA65_RS22515	0.72	-1.6
4,868,515	-		DZA65_RS22515	0.72	+1.7
4,868,515	-		DZA65_RS22515	0.72	+3.2
4,868,515	-		DZA65_RS22515	0.72	-2.7
4,868,515	-		DZA65_RS22515	0.72	-2.1
4,868,515	-		DZA65_RS22515	0.72	+0.4
4,868,516	+		DZA65_RS22515	0.72	-1.3
4,868,516	+		DZA65_RS22515	0.72	-2.9
4,868,516	+		DZA65_RS22515	0.72	-1.3
4,868,516	+		DZA65_RS22515	0.72	-1.6
4,868,516	+		DZA65_RS22515	0.72	-2.1
4,868,516	+		DZA65_RS22515	0.72	-0.5
4,868,517	-		DZA65_RS22515	0.72	+1.7
4,868,517	-		DZA65_RS22515	0.72	+1.1
4,868,517	-		DZA65_RS22515	0.72	+0.5
4,868,517	-		DZA65_RS22515	0.72	-3.3
4,868,517	-		DZA65_RS22515	0.72	-2.2
4,868,517	-		DZA65_RS22515	0.72	+0.2
4,868,517	-		DZA65_RS22515	0.72	-1.5
4,868,517	-		DZA65_RS22515	0.72	-0.2
4,868,517	-		DZA65_RS22515	0.72	-0.6
4,868,531	+		DZA65_RS22515	0.74	-2.3
4,868,531	+		DZA65_RS22515	0.74	+1.7
4,868,531	+		DZA65_RS22515	0.74	+0.2
4,868,619	+		DZA65_RS22515	0.81	-2.1
4,868,620	-		DZA65_RS22515	0.81	+0.6
4,868,672	-		DZA65_RS22515	0.85	-0.9
4,868,748	+				-1.3
4,868,748	+				+1.3
4,868,748	+				-0.3
4,868,748	+				-0.8
4,868,749	-				+1.4
4,868,749	-				-1.6
4,868,749	-				-0.2
4,868,749	-				+0.7
4,868,749	-				-1.7
4,868,784	+				-0.9
4,868,784	+				-0.5
4,868,784	+				-2.1
4,868,784	+				-1.1
4,868,784	+				-0.4
4,868,784	+				-1.8
4,868,785	-				+0.7
4,868,785	-				+2.7
4,868,785	-				+0.2
4,868,785	-				-0.1
4,868,785	-				-0.1
4,868,786	+				-1.3
4,868,786	+				+0.2
4,868,786	+				-0.5
4,868,787	-				+0.0
4,868,787	-				+0.2
4,868,787	-				+0.5
4,868,787	-				-0.8
4,868,787	-				-1.9
4,868,787	-				-1.8
4,868,795	+				+1.2
4,868,796	-				+0.0
4,868,853	+				-2.3
4,868,853	+				-0.8
4,868,853	+				-1.3
4,868,854	-				-0.6
4,868,854	-				+0.1
4,868,854	-				+1.0
4,868,893	+				-1.6
4,868,903	+				+0.5
4,868,904	-				-2.4
4,868,904	-				+1.1
4,868,911	+				-0.7
4,868,911	+				+0.3
4,868,911	+				+0.1
4,868,911	+				-1.1
4,868,911	+				-0.5
4,868,911	+				+0.1
4,868,912	-				+0.2
4,868,912	-				-1.6
4,868,912	-				+0.2
4,868,912	-				-1.2
4,868,912	-				+2.5
4,868,912	-				+1.5
4,868,953	+				+1.2
4,868,953	+				+0.4
4,868,953	+				+0.2
4,868,953	+				-2.2
4,868,953	+				-0.8
4,868,954	-				+0.4
4,868,954	-				+0.2
4,868,954	-				-2.2
4,869,015	-				+1.7
4,869,026	+				-0.3
4,869,051	-				-0.2
4,869,051	-				-2.5
4,869,065	-				+1.0
4,869,265	+		DZA65_RS22520	0.15	+1.2
4,869,265	+		DZA65_RS22520	0.15	+1.2
4,869,266	-		DZA65_RS22520	0.15	-1.8
4,869,266	-		DZA65_RS22520	0.15	-0.1
4,869,275	+		DZA65_RS22520	0.16	-1.2
4,869,361	+		DZA65_RS22520	0.19	-1.6
4,869,361	+		DZA65_RS22520	0.19	-1.3
4,869,362	-		DZA65_RS22520	0.20	-2.1
4,869,362	-		DZA65_RS22520	0.20	-1.2
4,869,362	-		DZA65_RS22520	0.20	-0.9
4,869,362	-		DZA65_RS22520	0.20	-0.5
4,869,362	-		DZA65_RS22520	0.20	-0.3
4,869,362	-		DZA65_RS22520	0.20	+1.2
4,869,362	-		DZA65_RS22520	0.20	-1.5
4,869,461	-		DZA65_RS22520	0.24	-1.6
4,869,461	-		DZA65_RS22520	0.24	-1.2
4,869,461	-		DZA65_RS22520	0.24	-0.8
4,869,461	-		DZA65_RS22520	0.24	-0.8
4,869,520	+		DZA65_RS22520	0.26	+0.5
4,869,521	-		DZA65_RS22520	0.26	-1.1
4,869,521	-		DZA65_RS22520	0.26	+0.2
4,869,574	+		DZA65_RS22520	0.29	-0.8
4,869,574	+		DZA65_RS22520	0.29	-1.9
4,869,574	+		DZA65_RS22520	0.29	+0.8
4,869,575	-		DZA65_RS22520	0.29	-2.0
4,869,575	-		DZA65_RS22520	0.29	-1.3
4,869,575	-		DZA65_RS22520	0.29	+0.0
4,869,578	+		DZA65_RS22520	0.29	-1.8
4,869,578	+		DZA65_RS22520	0.29	+0.5
4,869,578	+		DZA65_RS22520	0.29	-2.8
4,869,579	-		DZA65_RS22520	0.29	-1.2
4,869,579	-		DZA65_RS22520	0.29	-0.6
4,869,579	-		DZA65_RS22520	0.29	-0.8
4,869,579	-		DZA65_RS22520	0.29	-0.1
4,869,579	-		DZA65_RS22520	0.29	-0.8
4,869,582	+		DZA65_RS22520	0.29	+0.1
4,869,583	-		DZA65_RS22520	0.29	+0.9
4,869,720	+		DZA65_RS22520	0.35	-2.7
4,869,721	-		DZA65_RS22520	0.35	-1.2
4,869,721	-		DZA65_RS22520	0.35	-1.2
4,869,740	+		DZA65_RS22520	0.36	-2.3
4,869,740	+		DZA65_RS22520	0.36	-1.1
4,869,740	+		DZA65_RS22520	0.36	+1.0
4,869,740	+		DZA65_RS22520	0.36	-0.2
4,869,740	+		DZA65_RS22520	0.36	-0.3
4,869,741	-		DZA65_RS22520	0.36	-0.7
4,869,745	+		DZA65_RS22520	0.36	-2.7
4,869,745	+		DZA65_RS22520	0.36	-0.3
4,869,745	+		DZA65_RS22520	0.36	-0.7
4,869,745	+		DZA65_RS22520	0.36	+0.5
4,869,745	+		DZA65_RS22520	0.36	+1.2
4,869,745	+		DZA65_RS22520	0.36	+0.7
4,869,745	+		DZA65_RS22520	0.36	+0.5
4,869,745	+		DZA65_RS22520	0.36	+0.5
4,869,746	-		DZA65_RS22520	0.36	-0.6
4,869,746	-		DZA65_RS22520	0.36	-1.3
4,869,902	+		DZA65_RS22520	0.43	+1.4
4,869,975	+		DZA65_RS22520	0.46	+0.7
4,869,976	-		DZA65_RS22520	0.46	-1.6
4,869,983	+		DZA65_RS22520	0.46	-1.3
4,870,067	-		DZA65_RS22520	0.50	-1.1
4,870,094	+		DZA65_RS22520	0.51	+0.2
4,870,094	+		DZA65_RS22520	0.51	-1.3
4,870,094	+		DZA65_RS22520	0.51	+0.5
4,870,094	+		DZA65_RS22520	0.51	-2.1
4,870,095	-		DZA65_RS22520	0.51	-1.1
4,870,095	-		DZA65_RS22520	0.51	-1.8
4,870,095	-		DZA65_RS22520	0.51	-2.2
4,870,095	-		DZA65_RS22520	0.51	-1.6
4,870,095	-		DZA65_RS22520	0.51	-0.3
4,870,095	-		DZA65_RS22520	0.51	-0.6
4,870,164	+		DZA65_RS22520	0.54	+1.8
4,870,164	+		DZA65_RS22520	0.54	-0.3
4,870,165	-		DZA65_RS22520	0.54	+0.2
4,870,165	-		DZA65_RS22520	0.54	+0.4
4,870,207	+		DZA65_RS22520	0.56	+2.9
4,870,207	+		DZA65_RS22520	0.56	-1.4
4,870,207	+		DZA65_RS22520	0.56	+0.5
4,870,332	+		DZA65_RS22520	0.61	+0.7
4,870,332	+		DZA65_RS22520	0.61	-0.2
4,870,332	+		DZA65_RS22520	0.61	+0.5
4,870,333	-		DZA65_RS22520	0.61	-0.9
4,870,333	-		DZA65_RS22520	0.61	-0.8
4,870,333	-		DZA65_RS22520	0.61	-0.8
4,870,357	-				-1.8
4,870,357	-		DZA65_RS22520	0.62	-0.2
4,870,376	-		DZA65_RS22520	0.63	+0.7
4,870,391	+		DZA65_RS22520	0.64	-0.1
4,870,392	-		DZA65_RS22520	0.64	+1.1
4,870,410	+		DZA65_RS22520	0.65	+1.0
4,870,410	+		DZA65_RS22520	0.65	-0.1
4,870,410	+		DZA65_RS22520	0.65	-2.3
4,870,410	+		DZA65_RS22520	0.65	-2.1
4,870,410	+		DZA65_RS22520	0.65	+0.7
4,870,410	+		DZA65_RS22520	0.65	-0.8
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4,872,105	-		DZA65_RS22525	0.40	+0.2
4,872,105	-		DZA65_RS22525	0.40	-1.3
4,872,105	-		DZA65_RS22525	0.40	+0.2
4,872,105	-		DZA65_RS22525	0.40	-0.9
4,872,105	-		DZA65_RS22525	0.40	+0.3
4,872,151	+		DZA65_RS22525	0.43	+0.0
4,872,151	+		DZA65_RS22525	0.43	-1.0
4,872,151	+		DZA65_RS22525	0.43	+1.1
4,872,151	+		DZA65_RS22525	0.43	-1.3
4,872,151	+		DZA65_RS22525	0.43	+0.2
4,872,152	-		DZA65_RS22525	0.43	-0.8
4,872,152	-		DZA65_RS22525	0.43	+0.9
4,872,168	+		DZA65_RS22525	0.44	-2.1
4,872,168	+		DZA65_RS22525	0.44	-1.3
4,872,168	+		DZA65_RS22525	0.44	-1.8
4,872,168	+		DZA65_RS22525	0.44	-0.1
4,872,168	+		DZA65_RS22525	0.44	-2.7
4,872,168	+		DZA65_RS22525	0.44	-0.3
4,872,168	+		DZA65_RS22525	0.44	-0.8
4,872,169	-		DZA65_RS22525	0.44	-2.8
4,872,169	-		DZA65_RS22525	0.44	-0.8
4,872,217	-		DZA65_RS22525	0.47	-0.8