Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22290

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
4,821,049	-		DZA65_RS22280	0.89	+1.6
4,821,513	+				-1.1
4,821,513	+				+1.2
4,821,513	+				-1.8
4,821,515	+				-1.8
4,821,515	+				+1.0
4,821,515	+				-0.6
4,821,515	+				-0.1
4,821,515	+				+0.7
4,821,515	+				-0.6
4,821,515	+				+0.2
4,821,515	+				-0.1
4,821,543	+				-1.1
4,821,543	+				-0.7
4,821,544	-				+0.5
4,821,558	+				+0.2
4,821,559	-				-0.2
4,821,559	-				-1.9
4,821,595	+				+1.1
4,821,595	+				+0.4
4,821,595	+				-0.0
4,821,595	+				+1.4
4,821,595	+				-0.8
4,821,595	+				-1.8
4,821,596	-				+0.4
4,821,621	+				-2.2
4,821,621	+				-0.8
4,821,621	+				-0.8
4,821,621	+				+1.1
4,821,623	+				+0.1
4,821,623	+				+0.2
4,821,623	+				-0.9
4,821,624	-				+1.7
4,821,657	+				+1.7
4,821,657	+				+0.9
4,821,658	-				-0.8
4,821,689	+				-1.0
4,821,689	+				-0.1
4,821,689	+				+0.8
4,821,689	+				+0.2
4,821,689	+				-0.0
4,821,690	-				-1.7
4,821,690	-				-1.0
4,821,690	-				+1.0
4,821,710	+				+1.2
4,821,710	+				+1.1
4,821,710	+				+1.5
4,821,710	+				+1.7
4,821,710	+				-0.1
4,821,710	+				+1.2
4,821,710	+				+0.8
4,821,710	+				+0.2
4,821,710	+				-1.1
4,821,710	+				+0.8
4,821,711	-				+1.7
4,821,711	-				-1.9
4,821,711	-				+1.1
4,821,711	-				-1.1
4,821,711	-				-1.1
4,821,711	-				+1.4
4,821,711	-				+0.5
4,821,711	-				+0.4
4,821,711	-				+0.7
4,821,711	-				-0.8
4,821,711	-				-0.3
4,821,711	-				+1.4
4,821,711	-				-1.0
4,821,711	-				-0.0
4,821,711	-				+2.0
4,821,711	-				+0.1
4,821,711	-				-1.1
4,821,711	-				+0.6
4,821,711	-				-0.1
4,821,711	-				-0.3
4,821,711	-				-0.1
4,821,711	-				-0.3
4,821,711	-				+1.1
4,821,711	-				+1.4
4,821,754	+		DZA65_RS22290	0.10	-0.6
4,821,755	-		DZA65_RS22290	0.11	-0.6
4,821,755	-		DZA65_RS22290	0.11	-0.2
4,821,755	-		DZA65_RS22290	0.11	+0.2
4,821,755	-		DZA65_RS22290	0.11	-1.3
4,821,819	+		DZA65_RS22290	0.17	+0.7
4,821,819	+		DZA65_RS22290	0.17	+0.7
4,821,819	+		DZA65_RS22290	0.17	+0.4
4,821,835	+		DZA65_RS22290	0.19	-0.3
4,821,835	+		DZA65_RS22290	0.19	+1.1
4,821,835	+		DZA65_RS22290	0.19	-0.2
4,821,835	+		DZA65_RS22290	0.19	-0.3
4,821,835	+		DZA65_RS22290	0.19	+0.0
4,821,835	+		DZA65_RS22290	0.19	+0.4
4,821,835	+		DZA65_RS22290	0.19	-0.8
4,821,836	-		DZA65_RS22290	0.19	-1.3
4,821,836	-		DZA65_RS22290	0.19	-3.2
4,821,844	-		DZA65_RS22290	0.20	-1.1
4,821,844	-		DZA65_RS22290	0.20	+0.5
4,821,859	+		DZA65_RS22290	0.22	+0.1
4,821,888	+		DZA65_RS22290	0.25	+1.1
4,821,888	+		DZA65_RS22290	0.25	-0.3
4,821,888	+		DZA65_RS22290	0.25	+0.2
4,821,889	-		DZA65_RS22290	0.25	-0.5
4,821,889	-		DZA65_RS22290	0.25	+1.2
4,821,889	-		DZA65_RS22290	0.25	+1.3
4,821,889	-		DZA65_RS22290	0.25	+0.6
4,821,889	-		DZA65_RS22290	0.25	+0.0
4,821,889	-		DZA65_RS22290	0.25	-0.3
4,821,901	-		DZA65_RS22290	0.26	+0.8
4,821,908	+		DZA65_RS22290	0.27	+1.0
4,821,908	+		DZA65_RS22290	0.27	+0.5
4,821,908	+		DZA65_RS22290	0.27	+0.0
4,821,908	+		DZA65_RS22290	0.27	+0.4
4,821,908	+		DZA65_RS22290	0.27	+0.6
4,821,908	+		DZA65_RS22290	0.27	-0.0
4,821,909	-		DZA65_RS22290	0.27	+1.6
4,821,909	-		DZA65_RS22290	0.27	-2.1
4,821,909	-		DZA65_RS22290	0.27	-0.8
4,821,909	-		DZA65_RS22290	0.27	+0.5
4,821,909	-		DZA65_RS22290	0.27	+0.1
4,821,909	-		DZA65_RS22290	0.27	-0.6
4,821,909	-		DZA65_RS22290	0.27	+0.5
4,821,916	+		DZA65_RS22290	0.28	-1.0
4,821,916	+		DZA65_RS22290	0.28	+1.1
4,821,916	+		DZA65_RS22290	0.28	+3.1
4,821,916	+		DZA65_RS22290	0.28	-0.0
4,821,916	+		DZA65_RS22290	0.28	+1.3
4,821,916	+		DZA65_RS22290	0.28	-1.8
4,821,917	-		DZA65_RS22290	0.28	+2.4
4,821,917	-		DZA65_RS22290	0.28	+1.1
4,821,917	-		DZA65_RS22290	0.28	+0.4
4,821,925	+		DZA65_RS22290	0.29	+0.6
4,821,925	+		DZA65_RS22290	0.29	+0.2
4,821,926	-		DZA65_RS22290	0.29	-0.8
4,821,926	-		DZA65_RS22290	0.29	-1.8
4,821,926	-		DZA65_RS22290	0.29	+0.8
4,821,931	+		DZA65_RS22290	0.29	-1.2
4,821,962	+		DZA65_RS22290	0.33	+0.1
4,821,962	+		DZA65_RS22290	0.33	+0.1
4,821,962	+		DZA65_RS22290	0.33	+0.1
4,821,962	+		DZA65_RS22290	0.33	-0.3
4,821,963	-		DZA65_RS22290	0.33	-0.3
4,822,020	+		DZA65_RS22290	0.39	+1.1
4,822,177	+		DZA65_RS22290	0.55	+0.8
4,822,177	+		DZA65_RS22290	0.55	+0.2
4,822,177	+		DZA65_RS22290	0.55	-0.8
4,822,177	+		DZA65_RS22290	0.55	-1.8
4,822,177	+		DZA65_RS22290	0.55	-0.5
4,822,177	+		DZA65_RS22290	0.55	+0.2
4,822,177	+		DZA65_RS22290	0.55	-1.9
4,822,177	+		DZA65_RS22290	0.55	-2.2
4,822,177	+		DZA65_RS22290	0.55	+0.9
4,822,177	+		DZA65_RS22290	0.55	-1.0
4,822,177	+		DZA65_RS22290	0.55	-0.9
4,822,177	+		DZA65_RS22290	0.55	-0.0
4,822,177	+		DZA65_RS22290	0.55	+0.5
4,822,177	+		DZA65_RS22290	0.55	+0.8
4,822,177	+		DZA65_RS22290	0.55	-0.1
4,822,177	+		DZA65_RS22290	0.55	+0.8
4,822,177	+		DZA65_RS22290	0.55	+1.4
4,822,178	-		DZA65_RS22290	0.56	+1.0
4,822,178	-		DZA65_RS22290	0.56	-1.9
4,822,178	-		DZA65_RS22290	0.56	+1.0
4,822,178	-		DZA65_RS22290	0.56	+0.6
4,822,178	-		DZA65_RS22290	0.56	+0.5
4,822,178	-		DZA65_RS22290	0.56	-1.1
4,822,178	-		DZA65_RS22290	0.56	-0.1
4,822,178	-		DZA65_RS22290	0.56	+0.8
4,822,178	-		DZA65_RS22290	0.56	-0.5
4,822,178	-		DZA65_RS22290	0.56	-1.2
4,822,178	-		DZA65_RS22290	0.56	+1.2
4,822,178	-		DZA65_RS22290	0.56	+0.2
4,822,178	-		DZA65_RS22290	0.56	+0.4
4,822,178	-		DZA65_RS22290	0.56	+1.0
4,822,178	-		DZA65_RS22290	0.56	+0.7
4,822,178	-		DZA65_RS22290	0.56	-0.1
4,822,195	+		DZA65_RS22290	0.57	+0.2
4,822,195	+		DZA65_RS22290	0.57	+0.1
4,822,195	+		DZA65_RS22290	0.57	+0.4
4,822,196	-		DZA65_RS22290	0.58	+0.0
4,822,196	-		DZA65_RS22290	0.58	+1.0
4,822,196	-		DZA65_RS22290	0.58	-0.3
4,822,198	+		DZA65_RS22290	0.58	+1.1
4,822,199	-		DZA65_RS22290	0.58	+1.2
4,822,199	-		DZA65_RS22290	0.58	+0.6
4,822,213	+		DZA65_RS22290	0.59	-0.5
4,822,213	+		DZA65_RS22290	0.59	+0.1
4,822,213	+		DZA65_RS22290	0.59	+1.2
4,822,213	+		DZA65_RS22290	0.59	-1.3
4,822,213	+		DZA65_RS22290	0.59	+1.6
4,822,213	+		DZA65_RS22290	0.59	+0.7
4,822,213	+		DZA65_RS22290	0.59	+0.8
4,822,214	-		DZA65_RS22290	0.59	+0.9
4,822,214	-		DZA65_RS22290	0.59	+1.2
4,822,214	-		DZA65_RS22290	0.59	-0.1
4,822,214	-		DZA65_RS22290	0.59	+1.2
4,822,214	-		DZA65_RS22290	0.59	+1.0
4,822,214	-		DZA65_RS22290	0.59	+0.7
4,822,214	-		DZA65_RS22290	0.59	-1.2
4,822,225	+		DZA65_RS22290	0.61	-0.8
4,822,226	-		DZA65_RS22290	0.61	+1.0
4,822,226	-		DZA65_RS22290	0.61	+2.1
4,822,226	-		DZA65_RS22290	0.61	-1.3
4,822,226	-		DZA65_RS22290	0.61	+0.2
4,822,226	-		DZA65_RS22290	0.61	+0.3
4,822,226	-		DZA65_RS22290	0.61	+1.1
4,822,262	+		DZA65_RS22290	0.65	-0.7
4,822,262	+		DZA65_RS22290	0.65	+1.6
4,822,262	+		DZA65_RS22290	0.65	+1.4
4,822,262	+		DZA65_RS22290	0.65	+2.5
4,822,262	+		DZA65_RS22290	0.65	+1.2
4,822,262	+		DZA65_RS22290	0.65	-1.1
4,822,263	-		DZA65_RS22290	0.65	+0.8
4,822,263	-		DZA65_RS22290	0.65	+0.8
4,822,263	-		DZA65_RS22290	0.65	-0.5
4,822,263	-		DZA65_RS22290	0.65	-0.8
4,822,306	+		DZA65_RS22290	0.69	+0.8
4,822,306	+		DZA65_RS22290	0.69	-0.5
4,822,306	+		DZA65_RS22290	0.69	-1.1
4,822,306	+		DZA65_RS22290	0.69	+0.3
4,822,306	+		DZA65_RS22290	0.69	+1.2
4,822,307	-		DZA65_RS22290	0.69	+0.4
4,822,307	-		DZA65_RS22290	0.69	+1.3
4,822,307	-		DZA65_RS22290	0.69	-1.1
4,822,307	-		DZA65_RS22290	0.69	+2.5
4,822,309	+		DZA65_RS22290	0.70	+0.2
4,822,309	+		DZA65_RS22290	0.70	+0.5
4,822,310	-		DZA65_RS22290	0.70	+0.5
4,822,310	-		DZA65_RS22290	0.70	+0.6
4,822,310	-		DZA65_RS22290	0.70	+1.7
4,822,326	+		DZA65_RS22290	0.71	+0.4
4,822,326	+		DZA65_RS22290	0.71	-1.6
4,822,338	+		DZA65_RS22290	0.73	+0.9
4,822,338	+		DZA65_RS22290	0.73	-0.2
4,822,338	+		DZA65_RS22290	0.73	+0.7
4,822,338	+		DZA65_RS22290	0.73	+0.0
4,822,339	-		DZA65_RS22290	0.73	+0.5
4,822,339	-		DZA65_RS22290	0.73	+0.7
4,822,339	-		DZA65_RS22290	0.73	-0.3
4,822,374	+		DZA65_RS22290	0.76	+1.0
4,822,374	+		DZA65_RS22290	0.76	+1.0
4,822,374	+		DZA65_RS22290	0.76	+1.4
4,822,374	+		DZA65_RS22290	0.76	-1.1
4,822,375	-		DZA65_RS22290	0.77	+0.2
4,822,375	-		DZA65_RS22290	0.77	-0.6
4,822,375	-		DZA65_RS22290	0.77	+1.2
4,822,375	-		DZA65_RS22290	0.77	+0.4
4,822,375	-		DZA65_RS22290	0.77	-1.0
4,822,375	-		DZA65_RS22290	0.77	+1.9
4,822,387	+		DZA65_RS22290	0.78	+0.8
4,822,387	+		DZA65_RS22290	0.78	+0.1
4,822,387	+		DZA65_RS22290	0.78	+0.7
4,822,387	+		DZA65_RS22290	0.78	+0.2
4,822,387	+		DZA65_RS22290	0.78	-2.8
4,822,387	+		DZA65_RS22290	0.78	-0.9
4,822,387	+		DZA65_RS22290	0.78	-0.5
4,822,387	+		DZA65_RS22290	0.78	+0.9
4,822,387	+		DZA65_RS22290	0.78	+0.6
4,822,387	+		DZA65_RS22290	0.78	-0.1
4,822,387	+		DZA65_RS22290	0.78	+0.2
4,822,387	+		DZA65_RS22290	0.78	-0.4
4,822,388	-		DZA65_RS22290	0.78	+0.2
4,822,388	-		DZA65_RS22290	0.78	-0.3
4,822,388	-		DZA65_RS22290	0.78	-0.9
4,822,388	-		DZA65_RS22290	0.78	-0.6
4,822,388	-		DZA65_RS22290	0.78	+0.9
4,822,432	+		DZA65_RS22290	0.83	+1.6
4,822,433	-		DZA65_RS22290	0.83	+1.9
4,822,433	-		DZA65_RS22290	0.83	-0.3
4,822,461	+		DZA65_RS22290	0.86	-0.0
4,822,461	+		DZA65_RS22290	0.86	+0.6
4,822,461	+		DZA65_RS22290	0.86	-0.1
4,822,461	+		DZA65_RS22290	0.86	+3.6
4,822,461	+		DZA65_RS22290	0.86	-1.3
4,822,462	-		DZA65_RS22290	0.86	-0.6
4,822,462	-		DZA65_RS22290	0.86	-0.1
4,822,462	-		DZA65_RS22290	0.86	+0.6
4,822,462	-		DZA65_RS22290	0.86	-2.6
4,822,515	+				+0.2
4,822,515	+				+2.2
4,822,515	+				-0.5
4,822,515	+				+0.7
4,822,515	+				+0.7
4,822,516	-				+2.0
4,822,516	-				-0.3
4,822,516	-				+1.4
4,822,516	-				+0.5
4,822,516	-				-1.1
4,822,523	-				+1.2
4,822,523	-				+1.7
4,822,600	-				+0.0
4,822,600	-				-0.3
4,822,703	-		DZA65_RS22295	0.11	+0.1
4,822,763	-		DZA65_RS22295	0.18	+1.1
4,822,781	-		DZA65_RS22295	0.20	+1.5
4,822,781	-		DZA65_RS22295	0.20	+0.0
4,822,793	+		DZA65_RS22295	0.21	-1.3
4,822,793	+		DZA65_RS22295	0.21	+1.5
4,822,810	+		DZA65_RS22295	0.23	-1.6
4,822,810	+		DZA65_RS22295	0.23	+1.2
4,822,810	+		DZA65_RS22295	0.23	+0.9
4,822,810	+		DZA65_RS22295	0.23	-1.3
4,822,810	+		DZA65_RS22295	0.23	-0.6
4,822,810	+		DZA65_RS22295	0.23	-1.3
4,822,810	+		DZA65_RS22295	0.23	-0.7
4,822,810	+		DZA65_RS22295	0.23	-1.6
4,822,810	+		DZA65_RS22295	0.23	-0.4
4,822,810	+		DZA65_RS22295	0.23	-3.9
4,822,810	+		DZA65_RS22295	0.23	-0.3
4,822,810	+		DZA65_RS22295	0.23	-1.6
4,822,810	+		DZA65_RS22295	0.23	-0.8
4,822,810	+		DZA65_RS22295	0.23	+3.2
4,822,810	+		DZA65_RS22295	0.23	-0.8
4,822,810	+		DZA65_RS22295	0.23	+2.5
4,822,810	+		DZA65_RS22295	0.23	-0.3
4,822,810	+		DZA65_RS22295	0.23	+1.6
4,822,811	-		DZA65_RS22295	0.23	-0.1
4,822,811	-		DZA65_RS22295	0.23	+3.4
4,822,811	-		DZA65_RS22295	0.23	-1.4
4,822,811	-		DZA65_RS22295	0.23	+1.0
4,822,811	-		DZA65_RS22295	0.23	+1.7
4,822,811	-		DZA65_RS22295	0.23	-1.1
4,822,811	-		DZA65_RS22295	0.23	-0.2
4,822,811	-		DZA65_RS22295	0.23	-0.8
4,822,811	-		DZA65_RS22295	0.23	+1.5
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