Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS22205

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
4,802,287	+		DZA65_RS22200	0.51	-0.8
4,802,980	+				+0.4
4,802,980	+				-1.2
4,802,980	+				-0.9
4,802,980	+				+0.2
4,802,980	+				-1.3
4,802,980	+				-1.2
4,802,980	+				+2.5
4,802,981	-				+0.6
4,802,981	-				-0.3
4,802,981	-				+0.2
4,802,981	-				-1.9
4,802,981	-				+0.6
4,802,983	+				+0.3
4,803,023	+				-0.8
4,803,023	+				+1.2
4,803,024	-				-1.2
4,803,024	-				+2.8
4,803,051	+				+1.2
4,803,052	-				-1.5
4,803,052	-				-0.8
4,803,052	-				-1.1
4,803,052	-				-0.1
4,803,057	+				+0.8
4,803,058	-				-0.5
4,803,058	-				-0.9
4,803,123	+				-0.6
4,803,123	+				+0.3
4,803,123	+				-0.5
4,803,123	+				-3.0
4,803,123	+				+1.5
4,803,123	+				-1.1
4,803,123	+				+0.7
4,803,123	+				+0.6
4,803,124	-				-1.9
4,803,124	-				+0.5
4,803,124	-				-0.5
4,803,124	-				-2.1
4,803,124	-				-0.3
4,803,124	-				-0.6
4,803,124	-				-1.1
4,803,124	-				-3.7
4,803,124	-				-0.3
4,803,132	+				-0.4
4,803,132	+				-1.4
4,803,132	+				+0.3
4,803,133	-				+0.2
4,803,133	-				-0.3
4,803,136	+				+0.2
4,803,136	+				-0.8
4,803,136	+				-0.6
4,803,136	+				-2.1
4,803,136	+				-1.3
4,803,136	+				-0.3
4,803,136	+				+1.2
4,803,136	+				-0.1
4,803,136	+				-0.0
4,803,136	+				+0.6
4,803,136	+				+0.8
4,803,136	+				-0.3
4,803,137	-				-0.0
4,803,137	-				-1.3
4,803,137	-				-2.6
4,803,137	-				+0.9
4,803,137	-				-0.5
4,803,137	-				-1.1
4,803,141	+				+1.1
4,803,142	-				-1.1
4,803,142	-				-1.3
4,803,142	-				+1.7
4,803,153	+				+0.3
4,803,153	+				+0.2
4,803,156	+				+1.7
4,803,156	+				+0.6
4,803,156	+				-0.5
4,803,157	-				-1.6
4,803,157	-				+1.8
4,803,157	-				+1.7
4,803,157	-				-1.0
4,803,157	-				-1.1
4,803,187	-				-1.1
4,803,277	+				-1.3
4,803,277	+				-0.6
4,803,278	-				-1.3
4,803,429	+		DZA65_RS22205	0.23	-1.8
4,803,429	+		DZA65_RS22205	0.23	-2.1
4,803,440	+		DZA65_RS22205	0.24	+0.7
4,803,440	+		DZA65_RS22205	0.24	-2.5
4,803,440	+		DZA65_RS22205	0.24	-0.4
4,803,441	-		DZA65_RS22205	0.24	-1.3
4,803,456	+		DZA65_RS22205	0.26	-0.3
4,803,456	+		DZA65_RS22205	0.26	-2.6
4,803,456	+		DZA65_RS22205	0.26	-0.5
4,803,456	+		DZA65_RS22205	0.26	+0.0
4,803,456	+		DZA65_RS22205	0.26	-0.1
4,803,456	+		DZA65_RS22205	0.26	-1.3
4,803,456	+		DZA65_RS22205	0.26	+1.6
4,803,456	+		DZA65_RS22205	0.26	+1.5
4,803,456	+		DZA65_RS22205	0.26	+0.7
4,803,456	+		DZA65_RS22205	0.26	-1.0
4,803,456	+		DZA65_RS22205	0.26	-1.3
4,803,456	+		DZA65_RS22205	0.26	-0.5
4,803,456	+		DZA65_RS22205	0.26	-0.8
4,803,456	+		DZA65_RS22205	0.26	-2.8
4,803,456	+		DZA65_RS22205	0.26	+0.4
4,803,456	+		DZA65_RS22205	0.26	-0.8
4,803,456	+		DZA65_RS22205	0.26	+1.6
4,803,456	+		DZA65_RS22205	0.26	-2.1
4,803,456	+		DZA65_RS22205	0.26	+0.2
4,803,456	+		DZA65_RS22205	0.26	+1.8
4,803,456	+		DZA65_RS22205	0.26	-0.9
4,803,456	+		DZA65_RS22205	0.26	+0.4
4,803,456	+		DZA65_RS22205	0.26	-0.6
4,803,456	+		DZA65_RS22205	0.26	+0.2
4,803,456	+		DZA65_RS22205	0.26	-1.6
4,803,456	+		DZA65_RS22205	0.26	-1.1
4,803,456	+		DZA65_RS22205	0.26	-0.8
4,803,456	+		DZA65_RS22205	0.26	-1.0
4,803,457	-		DZA65_RS22205	0.26	-0.8
4,803,457	-		DZA65_RS22205	0.26	-0.6
4,803,457	-		DZA65_RS22205	0.26	-0.8
4,803,457	-		DZA65_RS22205	0.26	-1.6
4,803,457	-		DZA65_RS22205	0.26	-0.3
4,803,685	+		DZA65_RS22205	0.47	-0.9
4,803,685	+		DZA65_RS22205	0.47	+1.2
4,803,685	+		DZA65_RS22205	0.47	+0.0
4,803,685	+		DZA65_RS22205	0.47	-2.8
4,803,685	+		DZA65_RS22205	0.47	+0.7
4,803,686	-		DZA65_RS22205	0.48	-0.3
4,803,723	+		DZA65_RS22205	0.51	+0.3
4,803,723	+		DZA65_RS22205	0.51	-1.8
4,803,723	+		DZA65_RS22205	0.51	+0.7
4,803,803	+		DZA65_RS22205	0.59	-1.1
4,803,804	-		DZA65_RS22205	0.59	+0.2
4,803,815	+		DZA65_RS22205	0.60	-1.8
4,803,856	+		DZA65_RS22205	0.64	-0.8
4,803,899	+		DZA65_RS22205	0.68	-1.2
4,803,899	+		DZA65_RS22205	0.68	-0.8
4,803,899	+		DZA65_RS22205	0.68	-0.6
4,803,899	+		DZA65_RS22205	0.68	-2.3
4,803,899	+		DZA65_RS22205	0.68	-0.4
4,803,899	+		DZA65_RS22205	0.68	-0.8
4,803,899	+		DZA65_RS22205	0.68	-0.3
4,803,900	-		DZA65_RS22205	0.68	+2.2
4,803,900	-		DZA65_RS22205	0.68	-2.2
4,804,080	+		DZA65_RS22205	0.85	-0.3
4,804,080	+		DZA65_RS22205	0.85	+0.4
4,804,080	+				-0.2
4,804,080	+		DZA65_RS22205	0.85	-1.1
4,804,080	+		DZA65_RS22205	0.85	-1.6
4,804,080	+		DZA65_RS22205	0.85	-0.2
4,804,080	+		DZA65_RS22205	0.85	-0.1
4,804,081	-		DZA65_RS22205	0.85	-2.1
4,804,081	-		DZA65_RS22205	0.85	-2.1
4,804,081	-		DZA65_RS22205	0.85	-1.1
4,804,081	-		DZA65_RS22205	0.85	-0.8
4,804,081	-		DZA65_RS22205	0.85	-1.1
4,804,081	-		DZA65_RS22205	0.85	-2.9
4,804,081	-		DZA65_RS22205	0.85	-0.8
4,804,090	+		DZA65_RS22205	0.86	+1.4
4,804,090	+		DZA65_RS22205	0.86	+0.4
4,804,090	+		DZA65_RS22205	0.86	-1.1
4,804,091	-		DZA65_RS22205	0.86	+0.7
4,804,153	-				-1.3
4,804,201	-				-2.3
4,804,216	+				-0.3
4,804,216	+				-2.0
4,804,217	-				-1.3
4,804,217	-				-1.1
4,804,259	-				-1.6
4,804,259	-				-1.6
4,804,281	-				-1.3
4,804,353	-				+0.2
4,804,353	-				-3.2
4,804,393	+		DZA65_RS22210	0.10	-0.3
4,804,393	+		DZA65_RS22210	0.10	+0.7
4,804,393	+		DZA65_RS22210	0.10	+0.2
4,804,393	+		DZA65_RS22210	0.10	-1.3
4,804,393	+		DZA65_RS22210	0.10	-2.7
4,804,393	+		DZA65_RS22210	0.10	-0.3
4,804,394	-		DZA65_RS22210	0.11	-1.3
4,804,394	-		DZA65_RS22210	0.11	-0.3
4,804,394	-		DZA65_RS22210	0.11	+1.2
4,804,394	-		DZA65_RS22210	0.11	-1.1
4,804,394	-		DZA65_RS22210	0.11	-1.1
4,804,451	+		DZA65_RS22210	0.15	+0.5
4,804,451	+		DZA65_RS22210	0.15	-0.5
4,804,452	-		DZA65_RS22210	0.15	-1.1
4,804,525	-		DZA65_RS22210	0.20	-1.6
4,804,545	+		DZA65_RS22210	0.21	-2.2
4,804,545	+		DZA65_RS22210	0.21	-1.9
4,804,608	+		DZA65_RS22210	0.26	-0.6
4,804,608	+		DZA65_RS22210	0.26	-0.9
4,804,608	+		DZA65_RS22210	0.26	+0.2
4,804,608	+		DZA65_RS22210	0.26	-1.9
4,804,608	+		DZA65_RS22210	0.26	-0.3
4,804,608	+		DZA65_RS22210	0.26	-0.5
4,804,608	+		DZA65_RS22210	0.26	-2.5
4,804,608	+		DZA65_RS22210	0.26	-0.8
4,804,608	+		DZA65_RS22210	0.26	+0.7
4,804,609	-		DZA65_RS22210	0.26	-1.3
4,804,609	-		DZA65_RS22210	0.26	-1.6
4,804,609	-		DZA65_RS22210	0.26	-1.3
4,804,609	-		DZA65_RS22210	0.26	-0.8
4,804,609	-		DZA65_RS22210	0.26	-1.1
4,804,610	+		DZA65_RS22210	0.26	-2.4
4,804,610	+		DZA65_RS22210	0.26	+1.0
4,804,610	+		DZA65_RS22210	0.26	-3.1
4,804,610	+		DZA65_RS22210	0.26	-0.3
4,804,610	+		DZA65_RS22210	0.26	+0.2
4,804,610	+		DZA65_RS22210	0.26	+0.2
4,804,611	-		DZA65_RS22210	0.26	+0.4
4,804,611	-		DZA65_RS22210	0.26	-0.1
4,804,611	-		DZA65_RS22210	0.26	-1.8
4,804,611	-		DZA65_RS22210	0.26	-2.1
4,804,696	+		DZA65_RS22210	0.32	-0.6
4,804,696	+		DZA65_RS22210	0.32	-0.8
4,804,696	+		DZA65_RS22210	0.32	-0.3
4,804,696	+		DZA65_RS22210	0.32	-1.3
4,804,696	+		DZA65_RS22210	0.32	-2.2
4,804,697	-		DZA65_RS22210	0.32	-0.8
4,804,697	-		DZA65_RS22210	0.32	-1.8
4,804,969	+		DZA65_RS22210	0.51	+0.2
4,804,970	-		DZA65_RS22210	0.51	-1.9
4,805,047	-		DZA65_RS22210	0.57	-1.8
4,805,072	+		DZA65_RS22210	0.59	-1.1
4,805,073	-		DZA65_RS22210	0.59	-0.8
4,805,073	-		DZA65_RS22210	0.59	-1.5
4,805,155	+		DZA65_RS22210	0.64	-1.1
4,805,155	+		DZA65_RS22210	0.64	-2.6
4,805,198	+		DZA65_RS22210	0.67	-2.6
4,805,218	-		DZA65_RS22210	0.69	-2.4