Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS16125

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
3,491,343	+		DZA65_RS16120	0.73	-3.0
3,491,425	+		DZA65_RS16120	0.77	+0.7
3,491,425	+		DZA65_RS16120	0.77	-0.3
3,491,426	-		DZA65_RS16120	0.77	-1.0
3,491,426	-		DZA65_RS16120	0.77	-1.8
3,491,426	-		DZA65_RS16120	0.77	+2.6
3,491,426	-		DZA65_RS16120	0.77	-1.3
3,491,426	-		DZA65_RS16120	0.77	-0.6
3,491,568	-		DZA65_RS16120	0.84	-1.2
3,491,586	+		DZA65_RS16120	0.85	+0.6
3,491,586	+		DZA65_RS16120	0.85	+0.6
3,491,586	+		DZA65_RS16120	0.85	+0.4
3,491,586	+		DZA65_RS16120	0.85	+2.3
3,491,586	+		DZA65_RS16120	0.85	-2.0
3,491,587	-		DZA65_RS16120	0.85	-0.9
3,491,786	-				+0.0
3,491,786	-				-2.3
3,491,786	-				+1.4
3,491,786	-				-2.2
3,491,842	+				-0.4
3,491,843	-				-1.3
3,491,930	+				-0.8
3,491,931	-				-2.2
3,491,931	-				-0.9
3,491,931	-				-0.4
3,491,931	-				-1.0
3,491,935	+				-0.2
3,491,935	+				-1.0
3,491,936	-				-0.7
3,491,936	-				-0.4
3,491,993	+				-0.7
3,491,993	+				-1.6
3,491,993	+				-0.6
3,491,994	-				+0.4
3,491,994	-				+1.8
3,492,001	+				-0.9
3,492,035	+				+0.0
3,492,041	+				-0.1
3,492,042	-				-0.6
3,492,056	-				+0.3
3,492,096	-		DZA65_RS16125	0.11	-1.3
3,492,140	-		DZA65_RS16125	0.21	-0.1
3,492,140	-		DZA65_RS16125	0.21	+0.0
3,492,143	+		DZA65_RS16125	0.22	-0.6
3,492,143	+		DZA65_RS16125	0.22	+0.3
3,492,143	+		DZA65_RS16125	0.22	-0.8
3,492,143	+		DZA65_RS16125	0.22	+1.0
3,492,144	-		DZA65_RS16125	0.22	-1.3
3,492,144	-		DZA65_RS16125	0.22	+0.7
3,492,144	-		DZA65_RS16125	0.22	-0.8
3,492,175	+		DZA65_RS16125	0.29	+1.2
3,492,176	-		DZA65_RS16125	0.29	+0.5
3,492,356	+		DZA65_RS16125	0.70	-0.6
3,492,356	+		DZA65_RS16125	0.70	+0.0
3,492,356	+		DZA65_RS16125	0.70	-1.4
3,492,357	-		DZA65_RS16125	0.70	+0.6
3,492,357	-		DZA65_RS16125	0.70	-0.4
3,492,549	+				-0.3
3,492,549	+				-2.0
3,492,549	+				-0.3
3,492,549	+				+0.6
3,492,550	-				+0.1
3,492,567	+				-0.4
3,492,567	+				-1.3
3,492,567	+				+0.0
3,492,567	+				-0.8
3,492,567	+				+0.4
3,492,567	+				+0.0
3,492,567	+				-1.3
3,492,568	-				-2.2
3,492,568	-				-0.6
3,492,568	-				-0.8
3,492,714	-				+0.0
3,492,721	+				-0.5
3,492,721	+				-1.6
3,492,721	+				+0.5
3,492,721	+				+0.8
3,492,721	+				-1.4
3,492,722	-				+0.0
3,492,725	+				-1.8
3,492,725	+				+2.6
3,492,726	-				+1.5
3,492,726	-				-0.2
3,492,759	-		DZA65_RS16130	0.11	-1.0
3,492,759	-		DZA65_RS16130	0.11	+1.6
3,492,787	+		DZA65_RS16130	0.13	+1.1
3,492,787	+		DZA65_RS16130	0.13	+0.4
3,492,791	+				+0.0
3,492,792	-		DZA65_RS16130	0.13	-1.6
3,492,792	-		DZA65_RS16130	0.13	-1.7
3,492,824	+		DZA65_RS16130	0.14	+0.1
3,492,824	+		DZA65_RS16130	0.14	-1.4
3,492,852	+		DZA65_RS16130	0.16	-3.4
3,492,852	+		DZA65_RS16130	0.16	-0.6
3,492,857	+		DZA65_RS16130	0.16	+0.5
3,492,858	-		DZA65_RS16130	0.16	+1.2
3,492,858	-		DZA65_RS16130	0.16	-0.9
3,492,858	-		DZA65_RS16130	0.16	+0.0
3,492,858	-		DZA65_RS16130	0.16	+2.0
3,492,861	-		DZA65_RS16130	0.16	-2.4
3,492,861	-		DZA65_RS16130	0.16	-0.6
3,492,861	-		DZA65_RS16130	0.16	-0.6
3,492,891	+		DZA65_RS16130	0.17	-2.4
3,492,891	+		DZA65_RS16130	0.17	-0.3
3,492,891	+		DZA65_RS16130	0.17	-1.6
3,492,891	+		DZA65_RS16130	0.17	+2.6
3,492,891	+		DZA65_RS16130	0.17	+0.2
3,492,891	+		DZA65_RS16130	0.17	-1.6
3,492,891	+		DZA65_RS16130	0.17	+0.3
3,492,891	+		DZA65_RS16130	0.17	-0.7
3,492,891	+		DZA65_RS16130	0.17	-0.6
3,492,891	+		DZA65_RS16130	0.17	+0.4
3,492,891	+		DZA65_RS16130	0.17	-0.6
3,492,891	+		DZA65_RS16130	0.17	-0.8
3,492,891	+		DZA65_RS16130	0.17	+0.7
3,492,892	-		DZA65_RS16130	0.17	+0.7
3,492,892	-		DZA65_RS16130	0.17	+0.3
3,492,892	-		DZA65_RS16130	0.17	-0.4
3,492,892	-		DZA65_RS16130	0.17	-1.0
3,492,892	-		DZA65_RS16130	0.17	-2.7
3,492,892	-		DZA65_RS16130	0.17	+1.0
3,492,892	-		DZA65_RS16130	0.17	-0.7
3,492,892	-		DZA65_RS16130	0.17	+1.3
3,492,892	-		DZA65_RS16130	0.17	-0.4
3,492,896	+		DZA65_RS16130	0.18	-0.4
3,492,896	+		DZA65_RS16130	0.18	-1.6
3,492,896	+				-0.6
3,492,896	+		DZA65_RS16130	0.18	+0.7
3,492,896	+		DZA65_RS16130	0.18	+0.0
3,492,896	+		DZA65_RS16130	0.18	-0.6
3,492,896	+		DZA65_RS16130	0.18	-1.6
3,492,896	+		DZA65_RS16130	0.18	-0.3
3,492,896	+		DZA65_RS16130	0.18	+0.5
3,492,897	-		DZA65_RS16130	0.18	-1.2
3,492,897	-		DZA65_RS16130	0.18	+0.2
3,492,897	-		DZA65_RS16130	0.18	+0.3
3,492,897	-		DZA65_RS16130	0.18	-1.6
3,492,897	-		DZA65_RS16130	0.18	-0.8
3,492,897	-		DZA65_RS16130	0.18	+0.3
3,492,897	-		DZA65_RS16130	0.18	-0.4
3,492,897	-		DZA65_RS16130	0.18	-1.7
3,492,897	-		DZA65_RS16130	0.18	-2.0
3,492,897	-		DZA65_RS16130	0.18	+0.7
3,492,915	+		DZA65_RS16130	0.18	-1.1
3,492,916	-		DZA65_RS16130	0.18	-1.0
3,492,927	+		DZA65_RS16130	0.19	-1.0
3,492,966	+				-2.0
3,492,966	+		DZA65_RS16130	0.21	-0.2
3,492,966	+		DZA65_RS16130	0.21	-0.6
3,492,966	+		DZA65_RS16130	0.21	-0.5
3,492,967	-		DZA65_RS16130	0.21	-0.9
3,492,967	-		DZA65_RS16130	0.21	-1.0
3,493,039	-		DZA65_RS16130	0.24	-0.1
3,493,056	+		DZA65_RS16130	0.25	-0.6
3,493,057	-		DZA65_RS16130	0.25	-2.4
3,493,057	-		DZA65_RS16130	0.25	+0.4
3,493,057	-		DZA65_RS16130	0.25	+1.0
3,493,151	+		DZA65_RS16130	0.29	-0.2
3,493,223	+		DZA65_RS16130	0.32	+0.0
3,493,223	+		DZA65_RS16130	0.32	-0.7
3,493,223	+		DZA65_RS16130	0.32	-0.3
3,493,224	-		DZA65_RS16130	0.33	-0.7
3,493,224	-		DZA65_RS16130	0.33	+1.4
3,493,224	-		DZA65_RS16130	0.33	+0.3
3,493,224	-		DZA65_RS16130	0.33	-1.6
3,493,224	-		DZA65_RS16130	0.33	-1.3
3,493,224	-		DZA65_RS16130	0.33	-0.1
3,493,224	-		DZA65_RS16130	0.33	-1.3
3,493,228	+		DZA65_RS16130	0.33	-0.3
3,493,228	+		DZA65_RS16130	0.33	-2.3
3,493,229	-		DZA65_RS16130	0.33	-1.0
3,493,229	-		DZA65_RS16130	0.33	-0.6
3,493,229	-		DZA65_RS16130	0.33	+0.3
3,493,233	+		DZA65_RS16130	0.33	+1.5
3,493,233	+		DZA65_RS16130	0.33	-1.6
3,493,233	+		DZA65_RS16130	0.33	+0.3
3,493,233	+		DZA65_RS16130	0.33	+1.0
3,493,233	+		DZA65_RS16130	0.33	-0.2
3,493,233	+		DZA65_RS16130	0.33	-1.4
3,493,233	+		DZA65_RS16130	0.33	-0.6
3,493,233	+		DZA65_RS16130	0.33	+1.0
3,493,233	+		DZA65_RS16130	0.33	+1.0
3,493,233	+		DZA65_RS16130	0.33	+0.1
3,493,234	-		DZA65_RS16130	0.33	+0.0
3,493,234	-		DZA65_RS16130	0.33	-0.6
3,493,234	-		DZA65_RS16130	0.33	+0.2
3,493,234	-		DZA65_RS16130	0.33	+0.6
3,493,234	-		DZA65_RS16130	0.33	-2.0
3,493,234	-		DZA65_RS16130	0.33	-0.8
3,493,234	-		DZA65_RS16130	0.33	+0.7
3,493,236	+		DZA65_RS16130	0.33	+1.8
3,493,236	+		DZA65_RS16130	0.33	+0.4
3,493,236	+		DZA65_RS16130	0.33	+1.2
3,493,236	+		DZA65_RS16130	0.33	-1.0
3,493,236	+		DZA65_RS16130	0.33	+0.4
3,493,236	+		DZA65_RS16130	0.33	-0.2
3,493,236	+		DZA65_RS16130	0.33	-2.3
3,493,236	+		DZA65_RS16130	0.33	-0.9
3,493,236	+		DZA65_RS16130	0.33	-1.6
3,493,236	+		DZA65_RS16130	0.33	+1.0
3,493,237	-		DZA65_RS16130	0.33	+0.4
3,493,237	-		DZA65_RS16130	0.33	+0.2
3,493,237	-		DZA65_RS16130	0.33	+1.0
3,493,237	-		DZA65_RS16130	0.33	-0.9
3,493,237	-		DZA65_RS16130	0.33	-0.9
3,493,281	-		DZA65_RS16130	0.35	+0.7
3,493,297	+		DZA65_RS16130	0.36	+2.0
3,493,297	+		DZA65_RS16130	0.36	+2.0
3,493,298	-		DZA65_RS16130	0.36	+3.8
3,493,298	-		DZA65_RS16130	0.36	-0.2
3,493,298	-		DZA65_RS16130	0.36	-0.2
3,493,298	-		DZA65_RS16130	0.36	-0.9
3,493,298	-		DZA65_RS16130	0.36	+0.6
3,493,298	-		DZA65_RS16130	0.36	+2.4
3,493,298	-		DZA65_RS16130	0.36	-0.2
3,493,298	-		DZA65_RS16130	0.36	-1.6
3,493,304	+		DZA65_RS16130	0.36	+0.7
3,493,305	-		DZA65_RS16130	0.36	+0.3
3,493,305	-		DZA65_RS16130	0.36	+3.0
3,493,305	-		DZA65_RS16130	0.36	+1.6
3,493,305	-		DZA65_RS16130	0.36	+0.0
3,493,314	+		DZA65_RS16130	0.37	+0.8
3,493,314	+		DZA65_RS16130	0.37	-1.8
3,493,316	+		DZA65_RS16130	0.37	+0.2
3,493,316	+		DZA65_RS16130	0.37	-0.4
3,493,316	+		DZA65_RS16130	0.37	-2.6
3,493,317	-		DZA65_RS16130	0.37	-0.1
3,493,317	-		DZA65_RS16130	0.37	-0.9
3,493,345	+		DZA65_RS16130	0.38	+0.9
3,493,345	+		DZA65_RS16130	0.38	-1.6
3,493,346	-		DZA65_RS16130	0.38	+1.2
3,493,352	+		DZA65_RS16130	0.38	-1.3
3,493,352	+		DZA65_RS16130	0.38	-1.0
3,493,352	+		DZA65_RS16130	0.38	-0.9
3,493,352	+		DZA65_RS16130	0.38	-1.6
3,493,352	+		DZA65_RS16130	0.38	+1.0
3,493,352	+		DZA65_RS16130	0.38	-1.6
3,493,353	-		DZA65_RS16130	0.38	+1.0
3,493,353	-		DZA65_RS16130	0.38	-2.0
3,493,353	-		DZA65_RS16130	0.38	+0.1
3,493,353	-		DZA65_RS16130	0.38	-1.8
3,493,353	-		DZA65_RS16130	0.38	-1.0
3,493,353	-		DZA65_RS16130	0.38	-1.1
3,493,353	-		DZA65_RS16130	0.38	-0.8
3,493,353	-		DZA65_RS16130	0.38	+1.0
3,493,353	-		DZA65_RS16130	0.38	+2.5
3,493,353	-		DZA65_RS16130	0.38	+1.8
3,493,353	-		DZA65_RS16130	0.38	-0.6
3,493,419	+		DZA65_RS16130	0.41	-0.9