Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13930

Experiment: Stem-Norland

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Stem-Norland
2,991,562	+		DZA65_RS13920	0.74	+0.3
2,991,563	-		DZA65_RS13920	0.74	-3.5
2,991,624	+		DZA65_RS13920	0.79	-1.7
2,991,625	-		DZA65_RS13920	0.79	-3.1
2,991,705	+		DZA65_RS13920	0.85	-1.1
2,991,705	+		DZA65_RS13920	0.85	-1.7
2,991,791	+				-2.3
2,991,792	-				-1.9
2,991,820	+				-3.5
2,991,821	-				-3.1
2,991,821	-				-3.2
2,991,861	+				-2.1
2,991,861	+				-3.0
2,991,861	+				-3.1
2,991,861	+				-2.3
2,991,861	+				-1.7
2,991,861	+				-1.4
2,991,862	-				-2.4
2,991,862	-				-1.7
2,991,862	-				-1.9
2,991,862	-				-1.7
2,991,862	-				-3.2
2,991,862	-				-2.7
2,991,862	-				+1.4
2,991,862	-				-2.8
2,991,862	-				-3.4
2,991,883	+				-1.4
2,991,884	-				-1.9
2,991,936	+				-1.9
2,991,937	-				-4.6
2,991,945	+				-2.8
2,991,946	-				-2.0
2,991,946	-				-2.3
2,991,946	-				-2.8
2,991,946	-				-1.5
2,991,960	+				-2.1
2,991,961	-				-2.0
2,991,989	+				-3.3
2,991,989	+				-1.4
2,991,989	+				-0.4
2,992,016	+				-1.9
2,992,016	+				-1.0
2,992,027	-				-3.5
2,992,034	+				-1.1
2,992,034	+				-2.0
2,992,036	+				-2.7
2,992,036	+				-1.9
2,992,037	-				-2.7
2,992,052	+				-1.9
2,992,052	+				-3.6
2,992,055	+				-4.1
2,992,055	+				-2.1
2,992,055	+				-1.0
2,992,055	+				-2.1
2,992,056	-				-3.3
2,992,056	-				-2.3
2,992,079	+				+0.3
2,992,079	+				-1.4
2,992,079	+				-2.6
2,992,079	+				-2.5
2,992,079	+				-3.5
2,992,080	-				-2.9
2,992,080	-				-3.8
2,992,080	-				-4.0
2,992,080	-				-0.1
2,992,099	+		DZA65_RS13925	0.12	-2.3
2,992,099	+		DZA65_RS13925	0.12	-2.1
2,992,159	+		DZA65_RS13925	0.24	-1.4
2,992,159	+		DZA65_RS13925	0.24	-1.9
2,992,159	+		DZA65_RS13925	0.24	-2.3
2,992,159	+		DZA65_RS13925	0.24	-0.7
2,992,159	+		DZA65_RS13925	0.24	-2.5
2,992,159	+		DZA65_RS13925	0.24	-3.0
2,992,159	+		DZA65_RS13925	0.24	+0.2
2,992,159	+		DZA65_RS13925	0.24	-1.9
2,992,159	+		DZA65_RS13925	0.24	-2.4
2,992,159	+		DZA65_RS13925	0.24	-2.4
2,992,159	+		DZA65_RS13925	0.24	-2.3
2,992,160	-		DZA65_RS13925	0.24	-3.2
2,992,160	-		DZA65_RS13925	0.24	-4.9
2,992,160	-		DZA65_RS13925	0.24	-1.7
2,992,160	-		DZA65_RS13925	0.24	-3.1
2,992,160	-				-0.1
2,992,160	-		DZA65_RS13925	0.24	-2.4
2,992,160	-		DZA65_RS13925	0.24	-2.9
2,992,160	-		DZA65_RS13925	0.24	-1.9
2,992,160	-		DZA65_RS13925	0.24	-2.7
2,992,160	-		DZA65_RS13925	0.24	-2.9
2,992,160	-		DZA65_RS13925	0.24	-3.4
2,992,166	+		DZA65_RS13925	0.26	-2.7
2,992,167	-		DZA65_RS13925	0.26	+0.9
2,992,232	+		DZA65_RS13925	0.39	-1.1
2,992,233	-		DZA65_RS13925	0.39	-3.1
2,992,252	+		DZA65_RS13925	0.43	-2.8
2,992,253	-		DZA65_RS13925	0.43	-3.1
2,992,253	-		DZA65_RS13925	0.43	-2.3
2,992,284	+		DZA65_RS13925	0.50	-1.9
2,992,284	+		DZA65_RS13925	0.50	-2.3
2,992,284	+		DZA65_RS13925	0.50	-3.9
2,992,284	+		DZA65_RS13925	0.50	-1.1
2,992,284	+		DZA65_RS13925	0.50	-1.9
2,992,284	+		DZA65_RS13925	0.50	-2.9
2,992,284	+		DZA65_RS13925	0.50	-0.1
2,992,285	-		DZA65_RS13925	0.50	-1.7
2,992,285	-		DZA65_RS13925	0.50	-2.3
2,992,285	-		DZA65_RS13925	0.50	-2.4
2,992,285	-		DZA65_RS13925	0.50	-1.1
2,992,285	-		DZA65_RS13925	0.50	-0.7
2,992,285	-		DZA65_RS13925	0.50	-2.6
2,992,285	-		DZA65_RS13925	0.50	-4.2
2,992,285	-		DZA65_RS13925	0.50	+0.3
2,992,285	-		DZA65_RS13925	0.50	-1.8
2,992,285	-		DZA65_RS13925	0.50	+0.9
2,992,285	-		DZA65_RS13925	0.50	-2.9
2,992,341	+		DZA65_RS13925	0.61	-2.3
2,992,341	+		DZA65_RS13925	0.61	-3.0
2,992,341	+		DZA65_RS13925	0.61	-2.3
2,992,342	-		DZA65_RS13925	0.62	-2.7
2,992,342	-		DZA65_RS13925	0.62	-1.5
2,992,370	+		DZA65_RS13925	0.67	-0.3
2,992,370	+		DZA65_RS13925	0.67	-0.8
2,992,370	+		DZA65_RS13925	0.67	-0.8
2,992,370	+		DZA65_RS13925	0.67	-1.2
2,992,370	+		DZA65_RS13925	0.67	-3.0
2,992,370	+		DZA65_RS13925	0.67	+0.4
2,992,371	-		DZA65_RS13925	0.67	-1.4
2,992,371	-		DZA65_RS13925	0.67	-1.7
2,992,371	-		DZA65_RS13925	0.67	-2.2
2,992,439	+		DZA65_RS13925	0.81	-1.3
2,992,439	+		DZA65_RS13925	0.81	-0.7
2,992,450	+		DZA65_RS13925	0.84	-3.8
2,992,451	-		DZA65_RS13925	0.84	-1.9
2,992,454	-		DZA65_RS13925	0.84	-1.2
2,992,481	+				-1.5
2,992,481	+				-2.0
2,992,482	-				-2.1
2,992,482	-				-1.1
2,992,482	-				-3.9
2,992,482	-				-1.4
2,992,482	-				-0.1
2,992,489	+				-1.8
2,992,489	+				-0.4
2,992,489	+				-1.4
2,992,490	-				-2.1
2,992,490	-				-3.7
2,992,518	-				-4.5
2,992,534	+				-3.2
2,992,535	-				-1.4
2,992,597	+				-2.5
2,992,601	-				-4.3
2,992,601	-				+0.4
2,992,653	-		DZA65_RS13930	0.12	+0.9
2,992,653	-		DZA65_RS13930	0.12	-1.5
2,992,653	-		DZA65_RS13930	0.12	-1.7
2,992,664	-		DZA65_RS13930	0.13	-1.5
2,992,778	-		DZA65_RS13930	0.24	-0.1
2,992,805	+		DZA65_RS13930	0.27	-1.1
2,992,806	-		DZA65_RS13930	0.27	-0.4
2,992,827	+		DZA65_RS13930	0.29	-4.9
2,992,828	-		DZA65_RS13930	0.29	-3.8
2,992,854	+		DZA65_RS13930	0.31	-2.7
2,992,854	+		DZA65_RS13930	0.31	-2.7
2,992,854	+		DZA65_RS13930	0.31	-2.1
2,992,854	+		DZA65_RS13930	0.31	-4.5
2,992,854	+		DZA65_RS13930	0.31	-1.4
2,992,854	+		DZA65_RS13930	0.31	-1.7
2,992,854	+		DZA65_RS13930	0.31	-1.8
2,992,854	+		DZA65_RS13930	0.31	-2.8
2,992,854	+		DZA65_RS13930	0.31	-1.7
2,992,854	+		DZA65_RS13930	0.31	-3.9
2,992,854	+		DZA65_RS13930	0.31	-2.9
2,992,855	-		DZA65_RS13930	0.31	-2.3
2,992,855	-		DZA65_RS13930	0.31	-1.7
2,992,855	-		DZA65_RS13930	0.31	-3.3
2,992,912	+		DZA65_RS13930	0.37	-1.9
2,992,978	+		DZA65_RS13930	0.44	-2.9
2,992,978	+		DZA65_RS13930	0.44	-3.7
2,992,985	-		DZA65_RS13930	0.44	-3.0
2,992,985	-		DZA65_RS13930	0.44	-2.3
2,993,015	-		DZA65_RS13930	0.47	-3.7
2,993,015	-		DZA65_RS13930	0.47	-0.9
2,993,033	+		DZA65_RS13930	0.49	-0.7
2,993,033	+		DZA65_RS13930	0.49	-0.7
2,993,033	+		DZA65_RS13930	0.49	-3.0
2,993,034	-		DZA65_RS13930	0.49	-1.8
2,993,034	-		DZA65_RS13930	0.49	-2.0
2,993,034	-		DZA65_RS13930	0.49	-0.5
2,993,034	-		DZA65_RS13930	0.49	-1.4
2,993,034	-		DZA65_RS13930	0.49	-2.1
2,993,034	-		DZA65_RS13930	0.49	-2.1
2,993,057	+		DZA65_RS13930	0.51	-0.8
2,993,058	-		DZA65_RS13930	0.51	-0.7
2,993,058	-		DZA65_RS13930	0.51	-0.1
2,993,064	+		DZA65_RS13930	0.52	-2.5
2,993,064	+		DZA65_RS13930	0.52	+0.7
2,993,064	+		DZA65_RS13930	0.52	-2.9
2,993,064	+		DZA65_RS13930	0.52	-2.5
2,993,064	+		DZA65_RS13930	0.52	-0.7
2,993,064	+		DZA65_RS13930	0.52	-2.8
2,993,064	+		DZA65_RS13930	0.52	-2.1
2,993,064	+		DZA65_RS13930	0.52	-3.0
2,993,064	+		DZA65_RS13930	0.52	-2.8
2,993,064	+		DZA65_RS13930	0.52	-0.7
2,993,064	+		DZA65_RS13930	0.52	-2.3
2,993,064	+		DZA65_RS13930	0.52	-0.4
2,993,064	+		DZA65_RS13930	0.52	-2.5
2,993,065	-		DZA65_RS13930	0.52	-4.0
2,993,065	-		DZA65_RS13930	0.52	-1.4
2,993,065	-		DZA65_RS13930	0.52	-2.4
2,993,065	-		DZA65_RS13930	0.52	-1.1
2,993,065	-		DZA65_RS13930	0.52	-2.5
2,993,065	-		DZA65_RS13930	0.52	-0.7
2,993,065	-		DZA65_RS13930	0.52	-1.8
2,993,075	+		DZA65_RS13930	0.53	-2.7
2,993,075	+		DZA65_RS13930	0.53	-2.8
2,993,075	+		DZA65_RS13930	0.53	-2.4
2,993,075	+		DZA65_RS13930	0.53	-1.7
2,993,076	-		DZA65_RS13930	0.53	-1.9
2,993,076	-		DZA65_RS13930	0.53	-2.5
2,993,076	-		DZA65_RS13930	0.53	-2.9
2,993,076	-				+0.3
2,993,098	-		DZA65_RS13930	0.55	-2.4
2,993,132	-		DZA65_RS13930	0.59	-1.4
2,993,188	+		DZA65_RS13930	0.64	-1.1
2,993,188	+		DZA65_RS13930	0.64	-2.3
2,993,188	+		DZA65_RS13930	0.64	-1.9
2,993,189	-		DZA65_RS13930	0.64	-1.1
2,993,189	-		DZA65_RS13930	0.64	+0.3
2,993,189	-		DZA65_RS13930	0.64	-2.8
2,993,189	-		DZA65_RS13930	0.64	-1.3
2,993,195	-		DZA65_RS13930	0.65	-1.7
2,993,195	-		DZA65_RS13930	0.65	-3.2
2,993,211	+		DZA65_RS13930	0.66	-3.3
2,993,211	+		DZA65_RS13930	0.66	-2.5
2,993,211	+		DZA65_RS13930	0.66	-1.5
2,993,211	+		DZA65_RS13930	0.66	-1.4
2,993,211	+		DZA65_RS13930	0.66	-3.3
2,993,212	-		DZA65_RS13930	0.67	-1.1
2,993,212	-		DZA65_RS13930	0.67	-1.0
2,993,212	-		DZA65_RS13930	0.67	-2.8
2,993,212	-		DZA65_RS13930	0.67	+0.9
2,993,301	+		DZA65_RS13930	0.75	-3.8
2,993,301	+		DZA65_RS13930	0.75	-2.4
2,993,301	+		DZA65_RS13930	0.75	-3.5
2,993,301	+		DZA65_RS13930	0.75	-3.1
2,993,302	-		DZA65_RS13930	0.75	-1.1
2,993,302	-		DZA65_RS13930	0.75	-0.7
2,993,302	-		DZA65_RS13930	0.75	-2.1
2,993,386	+		DZA65_RS13930	0.84	+0.4
2,993,386	+		DZA65_RS13930	0.84	-1.8
2,993,386	+		DZA65_RS13930	0.84	-1.2
2,993,387	-		DZA65_RS13930	0.84	-3.5
2,993,387	-		DZA65_RS13930	0.84	-2.9
2,993,401	+		DZA65_RS13930	0.85	-4.0
2,993,401	+		DZA65_RS13930	0.85	-1.7
2,993,461	+				-2.2
2,993,461	+				-3.6
2,993,461	+				-2.1
2,993,466	+				-2.5
2,993,466	+				-2.5
2,993,466	+				-1.4
2,993,466	+				-1.0
2,993,466	+				-1.7
2,993,466	+				-2.4
2,993,466	+				-4.4
2,993,467	-				-2.9
2,993,467	-				-1.4
2,993,467	-				-1.0
2,993,467	-				-1.9
2,993,467	-				-4.0
2,993,467	-				-2.3
2,993,467	-				-1.4
2,993,478	-				-2.9
2,993,478	-				-3.2
2,993,478	-				-1.2
2,993,478	-				-1.9
2,993,478	-				-2.8
2,993,503	+				-0.7
2,993,515	-				-0.7
2,993,609	+		DZA65_RS13935	0.16	-3.0
2,993,610	-		DZA65_RS13935	0.16	-0.1
2,993,657	+		DZA65_RS13935	0.27	-1.1
2,993,658	-		DZA65_RS13935	0.27	-2.7
2,993,658	-		DZA65_RS13935	0.27	-1.1
2,993,706	-		DZA65_RS13935	0.39	-2.2
2,993,744	-		DZA65_RS13935	0.48	-0.3
2,993,744	-		DZA65_RS13935	0.48	-0.1
2,993,757	-		DZA65_RS13935	0.51	+0.1
2,993,768	+		DZA65_RS13935	0.54	-1.1
2,993,769	-		DZA65_RS13935	0.54	-2.3
2,993,898	+		DZA65_RS13935	0.85	-2.7
2,993,898	+		DZA65_RS13935	0.85	-3.2
2,993,898	+		DZA65_RS13935	0.85	+0.1
2,993,898	+		DZA65_RS13935	0.85	-0.2
2,993,899	-		DZA65_RS13935	0.85	-0.7
2,993,899	-		DZA65_RS13935	0.85	-3.1
2,993,899	-		DZA65_RS13935	0.85	-2.7
2,993,899	-		DZA65_RS13935	0.85	-2.0
2,993,899	-		DZA65_RS13935	0.85	-2.5
2,993,899	-		DZA65_RS13935	0.85	-2.1
2,993,899	-		DZA65_RS13935	0.85	-2.8
2,993,899	-		DZA65_RS13935	0.85	-2.1
2,993,899	-		DZA65_RS13935	0.85	-1.4
2,993,899	-		DZA65_RS13935	0.85	+0.3
2,993,899	-		DZA65_RS13935	0.85	-1.7
2,993,899	-		DZA65_RS13935	0.85	-1.4
2,993,899	-		DZA65_RS13935	0.85	-1.9
2,993,910	-		DZA65_RS13935	0.88	-2.1
2,993,910	-		DZA65_RS13935	0.88	-3.3
2,993,910	-		DZA65_RS13935	0.88	-2.1
2,993,912	+		DZA65_RS13935	0.88	-2.2
2,993,912	+		DZA65_RS13935	0.88	-3.3
2,993,921	+				-2.3
2,993,921	+				-1.9
2,993,921	+				-0.1
2,993,922	-				-3.0
2,993,922	-				-2.3
2,993,922	-				-1.7
2,993,925	-				-2.8
2,993,925	-				-2.3
2,993,939	+				-2.5
2,993,939	+				-2.3
2,993,939	+				-4.1
2,993,939	+				-1.8
2,993,940	-				-3.7
2,993,940	-				-3.2
2,993,940	-				-1.1
2,993,940	-				-2.3
2,993,940	-				-0.4
2,993,940	-				-3.1
2,993,940	-				-1.9
2,993,950	+				-2.4
2,994,025	+		DZA65_RS13940	0.16	-2.9
2,994,025	+		DZA65_RS13940	0.16	-2.1
2,994,026	-		DZA65_RS13940	0.16	-2.8
2,994,078	+				-1.7
2,994,078	+		DZA65_RS13940	0.28	-3.7
2,994,078	+		DZA65_RS13940	0.28	-1.1
2,994,079	-		DZA65_RS13940	0.29	-1.9
2,994,079	-		DZA65_RS13940	0.29	-1.4
2,994,079	-		DZA65_RS13940	0.29	-2.9
2,994,079	-		DZA65_RS13940	0.29	-0.3
2,994,079	-		DZA65_RS13940	0.29	-1.4
2,994,079	-		DZA65_RS13940	0.29	-1.7
2,994,081	+		DZA65_RS13940	0.29	-2.4
2,994,082	-		DZA65_RS13940	0.29	-3.1
2,994,082	-		DZA65_RS13940	0.29	-1.1
2,994,117	+		DZA65_RS13940	0.38	-3.1
2,994,145	+		DZA65_RS13940	0.44	-1.1
2,994,145	+		DZA65_RS13940	0.44	-2.7
2,994,145	+		DZA65_RS13940	0.44	-2.4
2,994,146	-		DZA65_RS13940	0.45	-1.4
2,994,194	-		DZA65_RS13940	0.56	-3.1
2,994,217	+		DZA65_RS13940	0.62	-3.0
2,994,217	+		DZA65_RS13940	0.62	-2.2
2,994,217	+		DZA65_RS13940	0.62	-1.8
2,994,217	+		DZA65_RS13940	0.62	-2.3
2,994,218	-		DZA65_RS13940	0.62	-1.5
2,994,218	-		DZA65_RS13940	0.62	-1.6
2,994,228	+		DZA65_RS13940	0.64	-0.4
2,994,228	+		DZA65_RS13940	0.64	-4.1
2,994,228	+		DZA65_RS13940	0.64	-1.9
2,994,228	+		DZA65_RS13940	0.64	-3.5
2,994,228	+		DZA65_RS13940	0.64	-2.9
2,994,228	+		DZA65_RS13940	0.64	-4.3
2,994,228	+		DZA65_RS13940	0.64	-1.9
2,994,228	+		DZA65_RS13940	0.64	-1.9
2,994,228	+		DZA65_RS13940	0.64	-3.3
2,994,228	+		DZA65_RS13940	0.64	-2.5
2,994,228	+		DZA65_RS13940	0.64	-3.1
2,994,228	+		DZA65_RS13940	0.64	-1.7
2,994,229	-		DZA65_RS13940	0.65	-3.8
2,994,229	-		DZA65_RS13940	0.65	-3.2
2,994,229	-		DZA65_RS13940	0.65	-2.0
2,994,229	-		DZA65_RS13940	0.65	-0.4
2,994,229	-		DZA65_RS13940	0.65	-3.7
2,994,229	-		DZA65_RS13940	0.65	-0.7
2,994,232	-		DZA65_RS13940	0.65	+0.3
2,994,232	-		DZA65_RS13940	0.65	-1.1
2,994,266	-		DZA65_RS13940	0.73	-1.5
2,994,266	-		DZA65_RS13940	0.73	-1.1
2,994,297	+		DZA65_RS13940	0.81	-2.5
2,994,378	+				-0.8
2,994,379	-				-2.7
2,994,422	+				-1.4
2,994,422	+				-3.6
2,994,422	+				-4.0
2,994,422	+				-1.9
2,994,422	+				-4.0
2,994,423	-				-1.7
2,994,423	-				+0.3
2,994,423	-				-2.9
2,994,423	-				-4.9
2,994,441	+				-2.3
2,994,441	+				-1.1
2,994,441	+				-1.7
2,994,442	-				-1.4
2,994,442	-				-3.1
2,994,442	-				-2.8
2,994,442	-				-2.9
2,994,442	-				-2.5
2,994,489	+		DZA65_RS13945	0.15	-1.5
2,994,490	-		DZA65_RS13945	0.15	-3.5