Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NIAGMN_27090 and NIAGMN_27095 are separated by 15 nucleotides NIAGMN_27095 and NIAGMN_27100 are separated by 29 nucleotides NIAGMN_27100 and NIAGMN_27105 are separated by 6 nucleotides NIAGMN_27105 and NIAGMN_27110 are separated by 22 nucleotides
NIAGMN_27090: NIAGMN_27090 - DUF977 domain-containing protein, at 5,266,213 to 5,266,608
_27090
NIAGMN_27095: NIAGMN_27095 - DUF1627 domain-containing protein, at 5,266,624 to 5,267,394
_27095
NIAGMN_27100: NIAGMN_27100 - DNA replication protein DnaC, at 5,267,424 to 5,268,164
_27100
NIAGMN_27105: NIAGMN_27105 - DNA-binding protein, at 5,268,171 to 5,269,124
_27105
NIAGMN_27110: NIAGMN_27110 - Rha family transcriptional regulator, at 5,269,147 to 5,269,572
_27110
Position (kb) 5267
5268
5269 Strain fitness (log2 ratio) -1
0
1 at 5266.641 kb on + strand at 5267.531 kb on + strand, within NIAGMN_27100 at 5267.531 kb on + strand, within NIAGMN_27100 at 5267.578 kb on - strand, within NIAGMN_27100 at 5267.769 kb on + strand, within NIAGMN_27100 at 5267.862 kb on - strand, within NIAGMN_27100 at 5267.939 kb on - strand, within NIAGMN_27100 at 5267.939 kb on - strand, within NIAGMN_27100 at 5267.952 kb on - strand, within NIAGMN_27100 at 5268.087 kb on - strand, within NIAGMN_27100 at 5268.153 kb on - strand at 5268.366 kb on - strand, within NIAGMN_27105 at 5268.470 kb on - strand, within NIAGMN_27105 at 5268.544 kb on - strand, within NIAGMN_27105 at 5268.555 kb on - strand, within NIAGMN_27105 at 5268.858 kb on - strand, within NIAGMN_27105
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 5,266,641 + +0.2 5,267,531 + NIAGMN_27100 0.14 +0.0 5,267,531 + NIAGMN_27100 0.14 -0.9 5,267,578 - NIAGMN_27100 0.21 +0.6 5,267,769 + NIAGMN_27100 0.47 +0.0 5,267,862 - NIAGMN_27100 0.59 +1.5 5,267,939 - NIAGMN_27100 0.70 -0.4 5,267,939 - NIAGMN_27100 0.70 +0.7 5,267,952 - NIAGMN_27100 0.71 -0.5 5,268,087 - NIAGMN_27100 0.89 +0.3 5,268,153 - -1.7 5,268,366 - NIAGMN_27105 0.20 +0.1 5,268,470 - NIAGMN_27105 0.31 +0.2 5,268,544 - NIAGMN_27105 0.39 -0.7 5,268,555 - NIAGMN_27105 0.40 -0.0 5,268,858 - NIAGMN_27105 0.72 +0.7
Or see this region's nucleotide sequence