Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yceM and murJ are separated by 109 nucleotides murJ and flgN are separated by 39 nucleotides flgN and flgM are separated by 4 nucleotides flgM and flgA are separated by 75 nucleotides
NIAGMN_24130: yceM - Putative oxidoreductase YceM, at 4,719,692 to 4,720,615
yceM
NIAGMN_24135: murJ - murein biosynthesis integral membrane protein MurJ, at 4,720,725 to 4,722,260
murJ
NIAGMN_24140: flgN - flagella biosynthesis chaperone FlgN, at 4,722,300 to 4,722,716
flgN
NIAGMN_24145: flgM - anti-sigma-28 factor FlgM, at 4,722,721 to 4,723,014
flgM
NIAGMN_24150: flgA - flagellar basal body P-ring formation protein FlgA, at 4,723,090 to 4,723,749
flgA
Position (kb) 4720
4721
4722
4723 Strain fitness (log2 ratio) -1
0
1
2 at 4719.783 kb on + strand at 4719.934 kb on + strand, within yceM at 4719.954 kb on + strand, within yceM at 4719.955 kb on - strand, within yceM at 4720.055 kb on - strand, within yceM at 4720.135 kb on + strand, within yceM at 4720.141 kb on + strand, within yceM at 4720.184 kb on + strand, within yceM at 4720.327 kb on + strand, within yceM at 4720.327 kb on + strand, within yceM at 4720.328 kb on - strand, within yceM at 4722.258 kb on + strand at 4722.258 kb on + strand at 4722.259 kb on - strand at 4722.361 kb on - strand, within flgN
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 4,719,783 + +1.1 4,719,934 + yceM NIAGMN_24130 0.26 +0.4 4,719,954 + yceM NIAGMN_24130 0.28 +1.0 4,719,955 - yceM NIAGMN_24130 0.28 -0.7 4,720,055 - yceM NIAGMN_24130 0.39 +0.8 4,720,135 + yceM NIAGMN_24130 0.48 -1.0 4,720,141 + yceM NIAGMN_24130 0.49 +0.1 4,720,184 + yceM NIAGMN_24130 0.53 -1.1 4,720,327 + yceM NIAGMN_24130 0.69 -0.4 4,720,327 + yceM NIAGMN_24130 0.69 +0.4 4,720,328 - yceM NIAGMN_24130 0.69 -0.0 4,722,258 + +2.2 4,722,258 + +0.9 4,722,259 - +0.5 4,722,361 - flgN NIAGMN_24140 0.15 +0.0
Or see this region's nucleotide sequence