Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt fbaB and gatY are separated by 298 nucleotides gatY and gatZ are separated by 28 nucleotides
NIAGMN_22050: fbaB - class I fructose-bisphosphate aldolase, at 4,348,276 to 4,349,328
fbaB
NIAGMN_22060: gatY - tagatose-bisphosphate aldolase subunit GatY, at 4,349,627 to 4,350,481
gatY
NIAGMN_22065: gatZ - tagatose-bisphosphate aldolase subunit GatZ, at 4,350,510 to 4,351,772
gatZ
Position (kb)
4349
4350
4351 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4348.691 kb on + strand, within fbaB at 4348.724 kb on - strand, within fbaB at 4348.780 kb on + strand, within fbaB at 4348.780 kb on + strand, within fbaB at 4348.896 kb on + strand, within fbaB at 4348.967 kb on + strand, within fbaB at 4348.968 kb on - strand, within fbaB at 4349.016 kb on + strand, within fbaB at 4349.017 kb on - strand, within fbaB at 4349.029 kb on + strand, within fbaB at 4349.029 kb on + strand, within fbaB at 4349.063 kb on + strand, within fbaB at 4349.106 kb on + strand, within fbaB at 4349.106 kb on + strand, within fbaB at 4349.106 kb on + strand, within fbaB at 4349.113 kb on + strand, within fbaB at 4349.115 kb on + strand, within fbaB at 4349.238 kb on + strand at 4349.238 kb on + strand at 4349.239 kb on - strand at 4349.316 kb on + strand at 4349.385 kb on + strand at 4349.385 kb on + strand at 4349.385 kb on + strand at 4349.385 kb on + strand at 4349.385 kb on + strand at 4349.386 kb on - strand at 4349.412 kb on + strand at 4349.438 kb on + strand at 4349.438 kb on + strand at 4349.438 kb on + strand at 4349.438 kb on + strand at 4349.438 kb on + strand at 4349.439 kb on - strand at 4349.439 kb on - strand at 4349.439 kb on - strand at 4349.439 kb on - strand at 4349.445 kb on - strand at 4349.460 kb on + strand at 4349.461 kb on - strand at 4349.461 kb on - strand at 4349.731 kb on - strand, within gatY at 4349.789 kb on - strand, within gatY at 4349.789 kb on - strand, within gatY at 4350.169 kb on + strand, within gatY at 4350.169 kb on + strand, within gatY at 4350.169 kb on + strand, within gatY at 4350.170 kb on - strand, within gatY at 4350.170 kb on - strand, within gatY at 4350.173 kb on + strand, within gatY at 4350.173 kb on + strand, within gatY at 4350.174 kb on - strand, within gatY at 4350.174 kb on - strand, within gatY at 4350.480 kb on - strand at 4350.496 kb on - strand at 4350.557 kb on - strand at 4350.847 kb on - strand, within gatZ at 4351.006 kb on - strand, within gatZ at 4351.148 kb on - strand, within gatZ
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 4,348,691 + fbaB NIAGMN_22050 0.39 +1.1 4,348,724 - fbaB NIAGMN_22050 0.43 -0.1 4,348,780 + fbaB NIAGMN_22050 0.48 -0.4 4,348,780 + fbaB NIAGMN_22050 0.48 -1.3 4,348,896 + fbaB NIAGMN_22050 0.59 -1.8 4,348,967 + fbaB NIAGMN_22050 0.66 -1.3 4,348,968 - fbaB NIAGMN_22050 0.66 -1.4 4,349,016 + fbaB NIAGMN_22050 0.70 +0.2 4,349,017 - fbaB NIAGMN_22050 0.70 +0.1 4,349,029 + fbaB NIAGMN_22050 0.72 -0.8 4,349,029 + fbaB NIAGMN_22050 0.72 +0.2 4,349,063 + fbaB NIAGMN_22050 0.75 +0.3 4,349,106 + fbaB NIAGMN_22050 0.79 -0.7 4,349,106 + fbaB NIAGMN_22050 0.79 +0.8 4,349,106 + fbaB NIAGMN_22050 0.79 -2.3 4,349,113 + fbaB NIAGMN_22050 0.79 -2.6 4,349,115 + fbaB NIAGMN_22050 0.80 +2.2 4,349,238 + +0.1 4,349,238 + -1.9 4,349,239 - +2.2 4,349,316 + -0.4 4,349,385 + +0.4 4,349,385 + +0.1 4,349,385 + +1.1 4,349,385 + -2.5 4,349,385 + +0.9 4,349,386 - -0.3 4,349,412 + +0.0 4,349,438 + -0.6 4,349,438 + -1.3 4,349,438 + +0.5 4,349,438 + -1.0 4,349,438 + -0.1 4,349,439 - +0.1 4,349,439 - -1.6 4,349,439 - +0.4 4,349,439 - +0.3 4,349,445 - +0.5 4,349,460 + +1.0 4,349,461 - +0.7 4,349,461 - +0.1 4,349,731 - gatY NIAGMN_22060 0.12 -1.9 4,349,789 - gatY NIAGMN_22060 0.19 +0.5 4,349,789 - gatY NIAGMN_22060 0.19 +0.8 4,350,169 + gatY NIAGMN_22060 0.63 -0.1 4,350,169 + gatY NIAGMN_22060 0.63 -1.5 4,350,169 + gatY NIAGMN_22060 0.63 -0.2 4,350,170 - gatY NIAGMN_22060 0.64 -1.1 4,350,170 - gatY NIAGMN_22060 0.64 -1.5 4,350,173 + gatY NIAGMN_22060 0.64 -2.1 4,350,173 + gatY NIAGMN_22060 0.64 +0.3 4,350,174 - gatY NIAGMN_22060 0.64 +3.2 4,350,174 - gatY NIAGMN_22060 0.64 -0.3 4,350,480 - -1.6 4,350,496 - -0.3 4,350,557 - +0.8 4,350,847 - gatZ NIAGMN_22065 0.27 +1.1 4,351,006 - gatZ NIAGMN_22065 0.39 -0.4 4,351,148 - gatZ NIAGMN_22065 0.51 -0.1
Or see this region's nucleotide sequence