Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NIAGMN_22040 and yegT overlap by 4 nucleotides yegT and fbaB are separated by 256 nucleotides
NIAGMN_22035: yegV - Uncharacterized sugar kinase YegV, at 4,344,779 to 4,345,744
yegV
NIAGMN_22040: NIAGMN_22040 - ADP-ribosylglycohydrolase family protein, at 4,345,741 to 4,346,745
_22040
NIAGMN_22045: yegT - Putative nucleoside transporter YegT, at 4,346,742 to 4,348,019
yegT
NIAGMN_22050: fbaB - class I fructose-bisphosphate aldolase, at 4,348,276 to 4,349,328
fbaB
Position (kb)
4346
4347
4348
4349 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4345.788 kb on - strand at 4346.008 kb on - strand, within NIAGMN_22040 at 4346.286 kb on + strand, within NIAGMN_22040 at 4346.287 kb on - strand, within NIAGMN_22040 at 4346.327 kb on - strand, within NIAGMN_22040 at 4346.435 kb on - strand, within NIAGMN_22040 at 4346.731 kb on - strand at 4347.018 kb on - strand, within yegT at 4347.024 kb on - strand, within yegT at 4347.050 kb on - strand, within yegT at 4347.056 kb on - strand, within yegT at 4347.085 kb on - strand, within yegT at 4347.131 kb on - strand, within yegT at 4347.144 kb on - strand, within yegT at 4347.153 kb on - strand, within yegT at 4347.246 kb on - strand, within yegT at 4347.335 kb on - strand, within yegT at 4347.706 kb on + strand, within yegT at 4347.706 kb on + strand, within yegT at 4347.706 kb on + strand, within yegT at 4347.707 kb on - strand, within yegT at 4347.707 kb on - strand, within yegT at 4347.707 kb on - strand, within yegT at 4347.719 kb on - strand, within yegT at 4347.929 kb on + strand at 4347.934 kb on - strand at 4348.203 kb on + strand at 4348.204 kb on - strand at 4348.271 kb on + strand at 4348.272 kb on - strand at 4348.335 kb on + strand at 4348.336 kb on - strand at 4348.336 kb on - strand at 4348.342 kb on - strand at 4348.360 kb on + strand at 4348.360 kb on + strand at 4348.378 kb on + strand at 4348.379 kb on - strand at 4348.382 kb on + strand, within fbaB at 4348.382 kb on + strand, within fbaB at 4348.425 kb on - strand, within fbaB at 4348.425 kb on - strand, within fbaB at 4348.428 kb on + strand, within fbaB at 4348.428 kb on + strand, within fbaB at 4348.429 kb on - strand, within fbaB at 4348.429 kb on - strand, within fbaB at 4348.431 kb on + strand, within fbaB at 4348.444 kb on + strand, within fbaB at 4348.445 kb on - strand, within fbaB at 4348.483 kb on - strand, within fbaB at 4348.691 kb on + strand, within fbaB at 4348.724 kb on - strand, within fbaB at 4348.780 kb on + strand, within fbaB at 4348.780 kb on + strand, within fbaB at 4348.896 kb on + strand, within fbaB at 4348.967 kb on + strand, within fbaB at 4348.968 kb on - strand, within fbaB at 4349.016 kb on + strand, within fbaB at 4349.017 kb on - strand, within fbaB
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 4,345,788 - +0.7 4,346,008 - NIAGMN_22040 0.27 -0.6 4,346,286 + NIAGMN_22040 0.54 +0.5 4,346,287 - NIAGMN_22040 0.54 +1.3 4,346,327 - NIAGMN_22040 0.58 -0.7 4,346,435 - NIAGMN_22040 0.69 -0.3 4,346,731 - +1.1 4,347,018 - yegT NIAGMN_22045 0.22 +0.2 4,347,024 - yegT NIAGMN_22045 0.22 -0.0 4,347,050 - yegT NIAGMN_22045 0.24 +0.9 4,347,056 - yegT NIAGMN_22045 0.25 -0.9 4,347,085 - yegT NIAGMN_22045 0.27 +0.3 4,347,131 - yegT NIAGMN_22045 0.30 -0.5 4,347,144 - yegT NIAGMN_22045 0.31 -1.9 4,347,153 - yegT NIAGMN_22045 0.32 -1.2 4,347,246 - yegT NIAGMN_22045 0.39 +3.1 4,347,335 - yegT NIAGMN_22045 0.46 -1.1 4,347,706 + yegT NIAGMN_22045 0.75 +1.2 4,347,706 + yegT NIAGMN_22045 0.75 -0.0 4,347,706 + yegT NIAGMN_22045 0.75 -0.7 4,347,707 - yegT NIAGMN_22045 0.76 +1.9 4,347,707 - yegT NIAGMN_22045 0.76 +1.1 4,347,707 - yegT NIAGMN_22045 0.76 -1.3 4,347,719 - yegT NIAGMN_22045 0.76 -0.3 4,347,929 + +0.2 4,347,934 - -0.1 4,348,203 + +0.2 4,348,204 - -0.5 4,348,271 + -0.3 4,348,272 - -0.1 4,348,335 + +0.9 4,348,336 - +2.1 4,348,336 - +1.1 4,348,342 - -0.8 4,348,360 + +0.3 4,348,360 + -1.1 4,348,378 + +1.5 4,348,379 - -0.8 4,348,382 + fbaB NIAGMN_22050 0.10 +0.9 4,348,382 + fbaB NIAGMN_22050 0.10 -1.0 4,348,425 - fbaB NIAGMN_22050 0.14 -0.3 4,348,425 - fbaB NIAGMN_22050 0.14 -0.6 4,348,428 + fbaB NIAGMN_22050 0.14 -0.0 4,348,428 + fbaB NIAGMN_22050 0.14 +1.0 4,348,429 - fbaB NIAGMN_22050 0.15 -0.6 4,348,429 - fbaB NIAGMN_22050 0.15 -2.0 4,348,431 + fbaB NIAGMN_22050 0.15 -0.6 4,348,444 + fbaB NIAGMN_22050 0.16 -0.5 4,348,445 - fbaB NIAGMN_22050 0.16 -0.2 4,348,483 - fbaB NIAGMN_22050 0.20 -0.2 4,348,691 + fbaB NIAGMN_22050 0.39 +1.1 4,348,724 - fbaB NIAGMN_22050 0.43 -0.1 4,348,780 + fbaB NIAGMN_22050 0.48 -0.4 4,348,780 + fbaB NIAGMN_22050 0.48 -1.3 4,348,896 + fbaB NIAGMN_22050 0.59 -1.8 4,348,967 + fbaB NIAGMN_22050 0.66 -1.3 4,348,968 - fbaB NIAGMN_22050 0.66 -1.4 4,349,016 + fbaB NIAGMN_22050 0.70 +0.2 4,349,017 - fbaB NIAGMN_22050 0.70 +0.1
Or see this region's nucleotide sequence