Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NIAGMN_22020 and yegX are separated by 64 nucleotides yegX and yegW are separated by 51 nucleotides yegW and yegV overlap by 27 nucleotides yegV and NIAGMN_22040 overlap by 4 nucleotides
NIAGMN_22020: NIAGMN_22020 - bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase, at 4,342,324 to 4,343,124
_22020
NIAGMN_22025: yegX - Uncharacterized protein YegX, at 4,343,189 to 4,344,007
yegX
NIAGMN_22030: yegW - Uncharacterized HTH-type transcriptional regulator YegW, at 4,344,059 to 4,344,805
yegW
NIAGMN_22035: yegV - Uncharacterized sugar kinase YegV, at 4,344,779 to 4,345,744
yegV
NIAGMN_22040: NIAGMN_22040 - ADP-ribosylglycohydrolase family protein, at 4,345,741 to 4,346,745
_22040
Position (kb) 4344
4345 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4343.132 kb on - strand at 4343.132 kb on - strand at 4343.134 kb on + strand at 4343.134 kb on + strand at 4343.134 kb on + strand at 4343.134 kb on + strand at 4343.134 kb on + strand at 4343.136 kb on + strand at 4343.136 kb on + strand at 4343.136 kb on + strand at 4343.233 kb on - strand at 4343.321 kb on + strand, within yegX at 4343.322 kb on - strand, within yegX at 4343.322 kb on - strand, within yegX at 4343.333 kb on + strand, within yegX at 4343.333 kb on + strand, within yegX at 4343.334 kb on - strand, within yegX at 4343.381 kb on + strand, within yegX at 4343.397 kb on + strand, within yegX at 4343.397 kb on + strand, within yegX at 4343.397 kb on + strand, within yegX at 4343.530 kb on + strand, within yegX at 4343.541 kb on + strand, within yegX at 4343.542 kb on - strand, within yegX at 4343.673 kb on + strand, within yegX at 4343.767 kb on + strand, within yegX at 4343.811 kb on - strand, within yegX at 4343.843 kb on + strand, within yegX at 4343.843 kb on + strand, within yegX at 4343.844 kb on - strand, within yegX at 4343.844 kb on - strand, within yegX at 4343.913 kb on + strand, within yegX at 4344.005 kb on + strand at 4344.022 kb on + strand at 4344.397 kb on + strand, within yegW at 4344.753 kb on - strand at 4344.780 kb on + strand at 4344.783 kb on - strand at 4344.804 kb on - strand at 4344.876 kb on - strand, within yegV at 4344.876 kb on - strand, within yegV at 4344.879 kb on - strand, within yegV at 4344.920 kb on + strand, within yegV at 4344.921 kb on - strand, within yegV at 4344.921 kb on - strand, within yegV at 4344.959 kb on + strand, within yegV at 4345.151 kb on + strand, within yegV at 4345.152 kb on - strand, within yegV at 4345.152 kb on - strand, within yegV at 4345.262 kb on + strand, within yegV at 4345.306 kb on - strand, within yegV at 4345.332 kb on - strand, within yegV at 4345.384 kb on + strand, within yegV at 4345.385 kb on - strand, within yegV at 4345.385 kb on - strand, within yegV at 4345.464 kb on - strand, within yegV at 4345.645 kb on - strand, within yegV at 4345.728 kb on - strand at 4345.788 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 4,343,132 - -1.4 4,343,132 - +0.6 4,343,134 + -0.3 4,343,134 + -0.9 4,343,134 + +0.6 4,343,134 + +0.5 4,343,134 + -1.2 4,343,136 + -0.9 4,343,136 + -1.1 4,343,136 + +0.5 4,343,233 - -0.6 4,343,321 + yegX NIAGMN_22025 0.16 -0.2 4,343,322 - yegX NIAGMN_22025 0.16 -1.2 4,343,322 - yegX NIAGMN_22025 0.16 +1.2 4,343,333 + yegX NIAGMN_22025 0.18 +0.4 4,343,333 + yegX NIAGMN_22025 0.18 -0.4 4,343,334 - yegX NIAGMN_22025 0.18 -1.0 4,343,381 + yegX NIAGMN_22025 0.23 +0.3 4,343,397 + yegX NIAGMN_22025 0.25 +0.5 4,343,397 + yegX NIAGMN_22025 0.25 +0.5 4,343,397 + yegX NIAGMN_22025 0.25 -0.3 4,343,530 + yegX NIAGMN_22025 0.42 -1.0 4,343,541 + yegX NIAGMN_22025 0.43 -1.8 4,343,542 - yegX NIAGMN_22025 0.43 +1.4 4,343,673 + yegX NIAGMN_22025 0.59 -0.4 4,343,767 + yegX NIAGMN_22025 0.71 -1.3 4,343,811 - yegX NIAGMN_22025 0.76 -0.4 4,343,843 + yegX NIAGMN_22025 0.80 +0.4 4,343,843 + yegX NIAGMN_22025 0.80 -1.5 4,343,844 - yegX NIAGMN_22025 0.80 +0.6 4,343,844 - yegX NIAGMN_22025 0.80 -0.4 4,343,913 + yegX NIAGMN_22025 0.88 +1.6 4,344,005 + -0.7 4,344,022 + -0.4 4,344,397 + yegW NIAGMN_22030 0.45 +2.4 4,344,753 - -0.1 4,344,780 + +0.8 4,344,783 - -0.3 4,344,804 - +1.1 4,344,876 - yegV NIAGMN_22035 0.10 +1.4 4,344,876 - yegV NIAGMN_22035 0.10 -2.7 4,344,879 - yegV NIAGMN_22035 0.10 -0.5 4,344,920 + yegV NIAGMN_22035 0.15 -3.3 4,344,921 - yegV NIAGMN_22035 0.15 -2.4 4,344,921 - yegV NIAGMN_22035 0.15 -1.5 4,344,959 + yegV NIAGMN_22035 0.19 +0.2 4,345,151 + yegV NIAGMN_22035 0.39 -2.1 4,345,152 - yegV NIAGMN_22035 0.39 +0.1 4,345,152 - yegV NIAGMN_22035 0.39 -1.5 4,345,262 + yegV NIAGMN_22035 0.50 -0.0 4,345,306 - yegV NIAGMN_22035 0.55 +1.3 4,345,332 - yegV NIAGMN_22035 0.57 -2.4 4,345,384 + yegV NIAGMN_22035 0.63 -0.3 4,345,385 - yegV NIAGMN_22035 0.63 +0.1 4,345,385 - yegV NIAGMN_22035 0.63 +2.0 4,345,464 - yegV NIAGMN_22035 0.71 -0.4 4,345,645 - yegV NIAGMN_22035 0.90 +0.7 4,345,728 - -0.9 4,345,788 - +0.7
Or see this region's nucleotide sequence