Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NIAGMN_21835 and NIAGMN_21840 are separated by 224 nucleotides NIAGMN_21840 and btsS are separated by 221 nucleotides btsS and btsR overlap by 4 nucleotides btsR and yehS are separated by 46 nucleotides
NIAGMN_21835: NIAGMN_21835 - DinI-like protein Z3916/ECs3483, at 4,303,959 to 4,304,207
_21835
NIAGMN_21840: NIAGMN_21840 - IS4 family transposase, at 4,304,432 to 4,304,500
_21840
NIAGMN_21845: btsS - two-component regulatory system sensor histidine kinase BtsS, at 4,304,722 to 4,306,407
btsS
NIAGMN_21850: btsR - two-component system response regulator BtsR, at 4,306,404 to 4,307,123
btsR
NIAGMN_21855: yehS - Uncharacterized protein YehS, at 4,307,170 to 4,307,640
yehS
Position (kb) 4304
4305
4306
4307 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 4303.872 kb on + strand at 4303.876 kb on + strand at 4303.876 kb on + strand at 4303.876 kb on + strand at 4303.876 kb on + strand at 4303.877 kb on - strand at 4304.231 kb on - strand at 4304.282 kb on - strand at 4304.310 kb on + strand at 4304.311 kb on - strand at 4304.531 kb on + strand at 4304.561 kb on - strand at 4304.684 kb on + strand at 4304.684 kb on + strand at 4304.819 kb on + strand at 4304.922 kb on + strand, within btsS at 4304.922 kb on + strand, within btsS at 4304.942 kb on + strand, within btsS at 4305.011 kb on + strand, within btsS at 4305.011 kb on + strand, within btsS at 4305.240 kb on + strand, within btsS at 4305.243 kb on + strand, within btsS at 4305.243 kb on + strand, within btsS at 4305.605 kb on + strand, within btsS at 4305.605 kb on + strand, within btsS at 4305.725 kb on + strand, within btsS at 4305.799 kb on + strand, within btsS at 4305.886 kb on - strand, within btsS at 4305.944 kb on - strand, within btsS at 4306.119 kb on + strand, within btsS at 4306.149 kb on + strand, within btsS at 4306.149 kb on + strand, within btsS at 4306.252 kb on + strand at 4306.307 kb on + strand at 4306.359 kb on + strand at 4306.359 kb on + strand at 4306.359 kb on + strand at 4306.363 kb on + strand at 4306.379 kb on + strand at 4306.385 kb on + strand at 4306.409 kb on + strand at 4306.631 kb on + strand, within btsR at 4306.660 kb on - strand, within btsR at 4306.821 kb on - strand, within btsR at 4306.829 kb on + strand, within btsR at 4306.893 kb on + strand, within btsR at 4306.894 kb on - strand, within btsR at 4306.939 kb on + strand, within btsR at 4306.939 kb on + strand, within btsR at 4306.939 kb on + strand, within btsR at 4306.940 kb on - strand, within btsR at 4307.031 kb on - strand, within btsR at 4307.066 kb on - strand at 4307.132 kb on + strand at 4307.174 kb on + strand at 4307.238 kb on + strand, within yehS at 4307.239 kb on - strand, within yehS at 4307.295 kb on + strand, within yehS at 4307.365 kb on + strand, within yehS
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 4,303,872 + +0.7 4,303,876 + +0.4 4,303,876 + +1.0 4,303,876 + +0.1 4,303,876 + -0.1 4,303,877 - -2.0 4,304,231 - +2.4 4,304,282 - -2.4 4,304,310 + -0.9 4,304,311 - -0.9 4,304,531 + -0.4 4,304,561 - -1.3 4,304,684 + +0.5 4,304,684 + -1.4 4,304,819 + +0.9 4,304,922 + btsS NIAGMN_21845 0.12 +1.2 4,304,922 + btsS NIAGMN_21845 0.12 -2.5 4,304,942 + btsS NIAGMN_21845 0.13 -1.0 4,305,011 + btsS NIAGMN_21845 0.17 -1.1 4,305,011 + btsS NIAGMN_21845 0.17 +0.0 4,305,240 + btsS NIAGMN_21845 0.31 -0.4 4,305,243 + btsS NIAGMN_21845 0.31 -1.5 4,305,243 + btsS NIAGMN_21845 0.31 -0.2 4,305,605 + btsS NIAGMN_21845 0.52 +0.8 4,305,605 + btsS NIAGMN_21845 0.52 +0.0 4,305,725 + btsS NIAGMN_21845 0.59 +1.4 4,305,799 + btsS NIAGMN_21845 0.64 +0.8 4,305,886 - btsS NIAGMN_21845 0.69 +0.4 4,305,944 - btsS NIAGMN_21845 0.72 -0.4 4,306,119 + btsS NIAGMN_21845 0.83 -0.9 4,306,149 + btsS NIAGMN_21845 0.85 -0.6 4,306,149 + btsS NIAGMN_21845 0.85 +0.9 4,306,252 + -0.8 4,306,307 + -0.4 4,306,359 + -0.6 4,306,359 + +0.1 4,306,359 + -1.6 4,306,363 + +0.4 4,306,379 + -1.3 4,306,385 + -0.4 4,306,409 + +3.2 4,306,631 + btsR NIAGMN_21850 0.32 +0.8 4,306,660 - btsR NIAGMN_21850 0.36 -0.4 4,306,821 - btsR NIAGMN_21850 0.58 -0.6 4,306,829 + btsR NIAGMN_21850 0.59 -0.5 4,306,893 + btsR NIAGMN_21850 0.68 -1.1 4,306,894 - btsR NIAGMN_21850 0.68 +0.4 4,306,939 + btsR NIAGMN_21850 0.74 -1.0 4,306,939 + btsR NIAGMN_21850 0.74 +1.9 4,306,939 + btsR NIAGMN_21850 0.74 -1.1 4,306,940 - btsR NIAGMN_21850 0.74 -2.7 4,307,031 - btsR NIAGMN_21850 0.87 -0.4 4,307,066 - +1.2 4,307,132 + -2.4 4,307,174 + -0.1 4,307,238 + yehS NIAGMN_21855 0.14 +0.9 4,307,239 - yehS NIAGMN_21855 0.15 -0.2 4,307,295 + yehS NIAGMN_21855 0.27 -2.0 4,307,365 + yehS NIAGMN_21855 0.41 -0.8
Or see this region's nucleotide sequence