Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NIAGMN_20265 and NIAGMN_20270 are separated by 669 nucleotides NIAGMN_20270 and NIAGMN_20275 are separated by 30 nucleotides NIAGMN_20275 and NIAGMN_20280 overlap by 1 nucleotides
NIAGMN_20265: NIAGMN_20265 - hypothetical protein, at 4,001,587 to 4,002,999
_20265
NIAGMN_20270: NIAGMN_20270 - Replication protein, at 4,003,669 to 4,004,316
_20270
NIAGMN_20275: NIAGMN_20275 - Phage-tail-NK domain-containing protein, at 4,004,347 to 4,004,916
_20275
NIAGMN_20280: NIAGMN_20280 - DUF2824 domain-containing protein, at 4,004,916 to 4,005,383
_20280
Position (kb)
4003
4004
4005 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 4003.616 kb on - strand at 4003.624 kb on + strand at 4003.670 kb on + strand at 4003.904 kb on - strand, within NIAGMN_20270 at 4003.949 kb on + strand, within NIAGMN_20270 at 4003.949 kb on + strand, within NIAGMN_20270 at 4003.950 kb on - strand, within NIAGMN_20270 at 4003.985 kb on - strand, within NIAGMN_20270 at 4003.985 kb on - strand, within NIAGMN_20270 at 4004.090 kb on + strand, within NIAGMN_20270 at 4004.093 kb on - strand, within NIAGMN_20270 at 4004.210 kb on - strand, within NIAGMN_20270 at 4004.330 kb on - strand at 4004.330 kb on - strand at 4004.512 kb on + strand, within NIAGMN_20275 at 4004.578 kb on - strand, within NIAGMN_20275 at 4004.751 kb on - strand, within NIAGMN_20275 at 4004.753 kb on + strand, within NIAGMN_20275 at 4004.754 kb on - strand, within NIAGMN_20275 at 4004.795 kb on + strand, within NIAGMN_20275 at 4004.795 kb on + strand, within NIAGMN_20275 at 4004.796 kb on - strand, within NIAGMN_20275 at 4004.799 kb on + strand, within NIAGMN_20275 at 4004.800 kb on - strand, within NIAGMN_20275 at 4004.988 kb on - strand, within NIAGMN_20280 at 4005.009 kb on + strand, within NIAGMN_20280 at 4005.012 kb on + strand, within NIAGMN_20280 at 4005.046 kb on - strand, within NIAGMN_20280 at 4005.055 kb on + strand, within NIAGMN_20280 at 4005.144 kb on + strand, within NIAGMN_20280 at 4005.152 kb on - strand, within NIAGMN_20280 at 4005.237 kb on + strand, within NIAGMN_20280 at 4005.238 kb on - strand, within NIAGMN_20280 at 4005.238 kb on - strand, within NIAGMN_20280 at 4005.297 kb on + strand, within NIAGMN_20280 at 4005.297 kb on + strand, within NIAGMN_20280 at 4005.298 kb on - strand, within NIAGMN_20280
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 4,003,616 - +1.7 4,003,624 + +0.4 4,003,670 + -1.6 4,003,904 - NIAGMN_20270 0.36 -0.4 4,003,949 + NIAGMN_20270 0.43 -0.1 4,003,949 + NIAGMN_20270 0.43 -2.1 4,003,950 - NIAGMN_20270 0.43 -2.0 4,003,985 - NIAGMN_20270 0.49 +0.0 4,003,985 - NIAGMN_20270 0.49 -0.4 4,004,090 + NIAGMN_20270 0.65 +1.5 4,004,093 - NIAGMN_20270 0.65 +1.8 4,004,210 - NIAGMN_20270 0.83 +0.7 4,004,330 - -1.0 4,004,330 - +0.5 4,004,512 + NIAGMN_20275 0.29 -0.4 4,004,578 - NIAGMN_20275 0.41 +1.2 4,004,751 - NIAGMN_20275 0.71 -0.1 4,004,753 + NIAGMN_20275 0.71 -0.2 4,004,754 - NIAGMN_20275 0.71 -1.5 4,004,795 + NIAGMN_20275 0.79 -3.1 4,004,795 + NIAGMN_20275 0.79 +0.4 4,004,796 - NIAGMN_20275 0.79 -3.0 4,004,799 + NIAGMN_20275 0.79 +0.3 4,004,800 - NIAGMN_20275 0.79 +1.6 4,004,988 - NIAGMN_20280 0.15 -0.4 4,005,009 + NIAGMN_20280 0.20 +1.0 4,005,012 + NIAGMN_20280 0.21 +0.3 4,005,046 - NIAGMN_20280 0.28 -1.5 4,005,055 + NIAGMN_20280 0.30 -0.9 4,005,144 + NIAGMN_20280 0.49 +0.0 4,005,152 - NIAGMN_20280 0.50 +0.4 4,005,237 + NIAGMN_20280 0.69 -1.8 4,005,238 - NIAGMN_20280 0.69 +0.1 4,005,238 - NIAGMN_20280 0.69 +0.6 4,005,297 + NIAGMN_20280 0.81 +1.2 4,005,297 + NIAGMN_20280 0.81 -0.3 4,005,298 - NIAGMN_20280 0.82 +0.3
Or see this region's nucleotide sequence