Strain Fitness in Escherichia coli ECRC102 around NIAGMN_18910

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
3,726,844	-				-0.6
3,726,844	-				-0.3
3,726,897	+				+0.7
3,726,907	+				-0.8
3,726,908	-				+2.2
3,727,325	+	ratA	NIAGMN_18900	0.88	-0.8
3,727,363	-				-1.4
3,727,403	+	rnfH	NIAGMN_18905	0.13	-0.8
3,727,407	+	rnfH	NIAGMN_18905	0.14	+0.7
3,727,407	+	rnfH	NIAGMN_18905	0.14	+0.2
3,727,407	+	rnfH	NIAGMN_18905	0.14	-2.4
3,727,407	+	rnfH	NIAGMN_18905	0.14	+0.5
3,727,408	-	rnfH	NIAGMN_18905	0.14	-0.5
3,727,465	-	rnfH	NIAGMN_18905	0.34	+0.1
3,727,508	+	rnfH	NIAGMN_18905	0.49	-2.0
3,727,509	-	rnfH	NIAGMN_18905	0.49	+0.2
3,727,550	+	rnfH	NIAGMN_18905	0.63	-1.9
3,727,551	-	rnfH	NIAGMN_18905	0.64	-1.0
3,727,588	+	rnfH	NIAGMN_18905	0.76	+2.2
3,727,588	+	rnfH	NIAGMN_18905	0.76	-0.1
3,727,589	-	rnfH	NIAGMN_18905	0.77	-0.9
3,727,717	-				-0.1
3,727,720	-				-2.0
3,727,720	-				-0.9
3,727,720	-				-0.1
3,727,720	-				-0.6
3,727,720	-				-0.7
3,727,720	-				+0.1
3,727,720	-				+0.4
3,727,720	-				+0.1
3,727,769	-	bamE	NIAGMN_18910	0.15	+0.3
3,727,803	-	bamE	NIAGMN_18910	0.25	-0.6
3,727,803	-	bamE	NIAGMN_18910	0.25	+1.4
3,727,803	-	bamE	NIAGMN_18910	0.25	-0.5
3,727,803	-	bamE	NIAGMN_18910	0.25	+0.6
3,727,836	+	bamE	NIAGMN_18910	0.35	+0.0
3,727,836	+	bamE	NIAGMN_18910	0.35	+1.1
3,727,836	+	bamE	NIAGMN_18910	0.35	-0.0
3,727,837	-	bamE	NIAGMN_18910	0.35	+0.2
3,727,837	-	bamE	NIAGMN_18910	0.35	+0.1
3,727,837	-	bamE	NIAGMN_18910	0.35	-0.1
3,727,846	+	bamE	NIAGMN_18910	0.37	+0.8
3,727,847	-	bamE	NIAGMN_18910	0.38	-0.6
3,727,923	-	bamE	NIAGMN_18910	0.60	+0.1
3,727,923	-	bamE	NIAGMN_18910	0.60	-0.1
3,727,932	-	bamE	NIAGMN_18910	0.63	+0.0
3,727,951	-	bamE	NIAGMN_18910	0.68	+0.5
3,728,022	-	bamE	NIAGMN_18910	0.89	+0.7
3,728,022	-	bamE	NIAGMN_18910	0.89	+0.3
3,728,022	-	bamE	NIAGMN_18910	0.89	+1.2
3,728,025	-				-0.7
3,728,092	-				-1.1
3,728,106	+				+1.2
3,728,110	-				+0.5
3,728,121	-				+1.3
3,728,121	-				+0.2
3,728,121	-				-1.1
3,728,124	-				-0.9
3,728,124	-				-0.1
3,728,181	-				+0.2
3,728,181	-				-2.9
3,728,247	-				-0.4
3,728,247	-				+0.1
3,728,247	-				-0.0
3,728,363	-				-0.6
3,728,402	+	recN	NIAGMN_18915	0.12	+1.5
3,728,723	+	recN	NIAGMN_18915	0.31	+0.3
3,728,723	+	recN	NIAGMN_18915	0.31	+0.7
3,728,723	+	recN	NIAGMN_18915	0.31	-0.6
3,728,723	+	recN	NIAGMN_18915	0.31	+1.4
3,728,758	+	recN	NIAGMN_18915	0.33	+0.8
3,728,758	+	recN	NIAGMN_18915	0.33	-0.7
3,728,778	+	recN	NIAGMN_18915	0.34	-0.2
3,728,894	-	recN	NIAGMN_18915	0.41	-0.4
3,728,896	+	recN	NIAGMN_18915	0.41	+0.9
3,728,897	-	recN	NIAGMN_18915	0.41	+0.4
3,728,897	-	recN	NIAGMN_18915	0.41	+0.6
3,728,930	+	recN	NIAGMN_18915	0.43	+2.4
3,729,051	-	recN	NIAGMN_18915	0.51	+1.5