Strain Fitness in Escherichia coli ECRC102 around NIAGMN_17195

Experiment: D-Glucose

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose
3,396,978	-				+0.9
3,397,000	+				-2.1
3,397,000	+				-0.6
3,397,001	-				-0.3
3,397,001	-				-0.2
3,397,001	-				+0.8
3,397,001	-				-0.0
3,397,001	-				-2.2
3,397,001	-				+0.5
3,397,001	-				-0.2
3,397,008	+				-2.3
3,397,036	-				-0.9
3,397,036	-				+0.7
3,397,121	+				-2.0
3,397,138	-				-0.8
3,397,141	-		NIAGMN_17185	0.10	+0.1
3,397,141	-		NIAGMN_17185	0.10	+1.6
3,397,189	-		NIAGMN_17185	0.19	-0.4
3,397,225	-		NIAGMN_17185	0.25	-0.1
3,397,225	-		NIAGMN_17185	0.25	-0.3
3,397,245	+		NIAGMN_17185	0.28	-0.3
3,397,248	+		NIAGMN_17185	0.29	+0.2
3,397,249	-		NIAGMN_17185	0.29	+0.6
3,397,380	+		NIAGMN_17185	0.52	+1.1
3,397,381	-		NIAGMN_17185	0.52	+0.3
3,397,381	-		NIAGMN_17185	0.52	+1.4
3,397,383	+		NIAGMN_17185	0.52	+0.3
3,397,384	-		NIAGMN_17185	0.52	-0.3
3,397,384	-		NIAGMN_17185	0.52	-0.1
3,397,432	+		NIAGMN_17185	0.61	+0.3
3,397,432	+		NIAGMN_17185	0.61	-0.6
3,397,432	+		NIAGMN_17185	0.61	+1.7
3,397,433	-		NIAGMN_17185	0.61	+0.5
3,397,533	-		NIAGMN_17185	0.78	-0.9
3,397,743	+	ygfI	NIAGMN_17190	0.25	-1.2
3,397,743	+	ygfI	NIAGMN_17190	0.25	-3.3
3,397,744	-	ygfI	NIAGMN_17190	0.25	+1.0
3,397,744	-	ygfI	NIAGMN_17190	0.25	+0.7
3,397,757	-	ygfI	NIAGMN_17190	0.29	+0.2
3,397,764	+	ygfI	NIAGMN_17190	0.31	+0.7
3,397,882	+	ygfI	NIAGMN_17190	0.69	-1.4
3,397,882	+	ygfI	NIAGMN_17190	0.69	-1.2
3,397,882	+	ygfI	NIAGMN_17190	0.69	+1.0
3,397,883	-	ygfI	NIAGMN_17190	0.70	-0.1
3,397,883	-	ygfI	NIAGMN_17190	0.70	+0.1
3,397,884	+	ygfI	NIAGMN_17190	0.70	-0.1
3,397,884	+	ygfI	NIAGMN_17190	0.70	-0.8
3,397,884	+	ygfI	NIAGMN_17190	0.70	-0.0
3,397,885	-	ygfI	NIAGMN_17190	0.70	-0.0
3,397,894	+	ygfI	NIAGMN_17190	0.73	-0.5
3,397,921	+	ygfI	NIAGMN_17190	0.82	-0.6
3,397,922	-	ygfI	NIAGMN_17190	0.82	-0.7
3,397,923	+	ygfI	NIAGMN_17190	0.82	-0.2
3,397,924	-	ygfI	NIAGMN_17190	0.83	+1.3
3,397,945	-	ygfI	NIAGMN_17190	0.89	+0.9
3,398,014	-				+1.4
3,398,030	+				+1.3
3,398,031	-				+0.7
3,398,045	+				+0.9
3,398,045	+				+1.0
3,398,045	+				+0.9
3,398,045	+				+0.5
3,398,046	-				-1.2
3,398,046	-				-3.6
3,398,092	+				-2.9
3,398,096	+				-1.8
3,398,096	+				+2.0
3,398,096	+				-1.2
3,398,096	+				-0.5
3,398,096	+				+0.7
3,398,097	-				+1.2
3,398,097	-				-0.1
3,398,097	-				+0.1
3,398,097	-				-3.2
3,398,111	+				+1.3
3,398,112	-				-1.3
3,398,121	-				-2.3
3,398,121	-				+1.0
3,398,121	-				-2.0
3,398,287	+	scpC	NIAGMN_17195	0.21	+0.7
3,398,287	+	scpC	NIAGMN_17195	0.21	-0.5
3,398,288	-	scpC	NIAGMN_17195	0.21	+0.3
3,398,372	-	scpC	NIAGMN_17195	0.27	+0.6
3,398,376	-	scpC	NIAGMN_17195	0.27	-1.6
3,398,486	+	scpC	NIAGMN_17195	0.35	+1.2
3,398,487	-	scpC	NIAGMN_17195	0.35	-1.4
3,398,589	+	scpC	NIAGMN_17195	0.42	+1.0
3,398,589	+	scpC	NIAGMN_17195	0.42	-1.6
3,398,590	-	scpC	NIAGMN_17195	0.42	+0.1
3,398,602	+	scpC	NIAGMN_17195	0.42	-0.6
3,398,603	-	scpC	NIAGMN_17195	0.43	-0.2
3,398,609	+	scpC	NIAGMN_17195	0.43	-2.0
3,398,610	-	scpC	NIAGMN_17195	0.43	-1.7
3,398,650	-	scpC	NIAGMN_17195	0.46	-1.7
3,398,664	-	scpC	NIAGMN_17195	0.47	-0.9
3,398,706	-	scpC	NIAGMN_17195	0.49	-0.1
3,398,730	+	scpC	NIAGMN_17195	0.51	-1.7
3,398,789	+	scpC	NIAGMN_17195	0.55	-0.7
3,398,790	-	scpC	NIAGMN_17195	0.55	+0.4
3,398,790	-	scpC	NIAGMN_17195	0.55	-1.0
3,398,854	+	scpC	NIAGMN_17195	0.59	-0.6
3,398,855	-	scpC	NIAGMN_17195	0.60	-1.3
3,398,963	-	scpC	NIAGMN_17195	0.67	-1.0
3,399,106	+	scpC	NIAGMN_17195	0.77	+0.1
3,399,107	-	scpC	NIAGMN_17195	0.77	-0.5
3,399,181	-	scpC	NIAGMN_17195	0.82	+1.3
3,399,181	-	scpC	NIAGMN_17195	0.82	-0.4
3,399,181	-	scpC	NIAGMN_17195	0.82	+0.8
3,399,237	+	scpC	NIAGMN_17195	0.85	-0.1
3,399,238	-	scpC	NIAGMN_17195	0.85	+1.1
3,399,368	+				+0.3
3,399,396	-				-0.2
3,399,404	+				-1.4
3,399,457	-				-0.5
3,399,477	+				-0.3
3,399,493	+				-1.1
3,399,549	+				-0.4
3,399,549	+				+1.3
3,399,550	-				+0.7
3,399,618	-	scpB	NIAGMN_17200	0.18	+0.4
3,399,687	-	scpB	NIAGMN_17200	0.27	+0.4
3,399,687	-	scpB	NIAGMN_17200	0.27	+0.5
3,399,860	+	scpB	NIAGMN_17200	0.49	-0.4
3,399,946	+	scpB	NIAGMN_17200	0.60	+0.2
3,399,946	+	scpB	NIAGMN_17200	0.60	-2.4
3,400,021	-	scpB	NIAGMN_17200	0.69	+0.9
3,400,021	-	scpB	NIAGMN_17200	0.69	-0.1
3,400,021	-	scpB	NIAGMN_17200	0.69	-1.4
3,400,021	-	scpB	NIAGMN_17200	0.69	+0.7
3,400,021	-	scpB	NIAGMN_17200	0.69	-2.5
3,400,153	+	scpB	NIAGMN_17200	0.86	+0.4
3,400,154	-	scpB	NIAGMN_17200	0.86	+0.1
3,400,154	-	scpB	NIAGMN_17200	0.86	-0.9
3,400,166	-	scpB	NIAGMN_17200	0.88	-1.1
3,400,166	-	scpB	NIAGMN_17200	0.88	-1.1
3,400,175	-	scpB	NIAGMN_17200	0.89	-0.4
3,400,179	-	scpB	NIAGMN_17200	0.89	-0.9
3,400,373	-	meaB	NIAGMN_17205	0.10	-0.1
3,400,373	-	meaB	NIAGMN_17205	0.10	-0.7
3,400,373	-	meaB	NIAGMN_17205	0.10	+0.0
3,400,373	-	meaB	NIAGMN_17205	0.10	+1.1
3,400,410	+	meaB	NIAGMN_17205	0.14	-1.4