Strain Fitness in Escherichia coli ECRC102 around NIAGMN_14945

Experiment: D-Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntfrlA and yhfL are separated by 295 nucleotidesyhfL and cysG are separated by 254 nucleotides NIAGMN_14940: frlA - fructoselysine/psicoselysine transporter, at 2,980,567 to 2,981,904 frlA NIAGMN_14945: yhfL - Uncharacterized protein YhfL, at 2,982,200 to 2,982,367 yhfL NIAGMN_14950: cysG - siroheme synthase CysG, at 2,982,622 to 2,983,995 cysG Position (kb) 2982 2983Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 2981.256 kb on + strand, within frlAat 2981.257 kb on - strand, within frlAat 2981.257 kb on - strand, within frlAat 2981.257 kb on - strand, within frlAat 2981.257 kb on - strand, within frlAat 2981.258 kb on + strand, within frlAat 2981.258 kb on + strand, within frlAat 2981.258 kb on + strand, within frlAat 2981.258 kb on + strand, within frlAat 2981.259 kb on - strand, within frlAat 2981.259 kb on - strand, within frlAat 2981.259 kb on - strand, within frlAat 2981.259 kb on - strand, within frlAat 2981.266 kb on - strand, within frlAat 2981.282 kb on + strand, within frlAat 2981.282 kb on + strand, within frlAat 2981.282 kb on + strand, within frlAat 2981.283 kb on - strand, within frlAat 2981.283 kb on - strand, within frlAat 2981.380 kb on - strand, within frlAat 2981.436 kb on + strand, within frlAat 2981.436 kb on + strand, within frlAat 2981.437 kb on - strand, within frlAat 2981.437 kb on - strand, within frlAat 2981.437 kb on - strand, within frlAat 2981.437 kb on - strand, within frlAat 2981.440 kb on + strand, within frlAat 2981.440 kb on + strand, within frlAat 2981.490 kb on + strand, within frlAat 2981.490 kb on + strand, within frlAat 2981.491 kb on - strand, within frlAat 2981.499 kb on + strand, within frlAat 2981.503 kb on + strand, within frlAat 2981.503 kb on + strand, within frlAat 2981.523 kb on + strand, within frlAat 2981.669 kb on + strand, within frlAat 2981.675 kb on + strand, within frlAat 2981.707 kb on + strand, within frlAat 2981.708 kb on - strand, within frlAat 2981.718 kb on - strand, within frlAat 2981.718 kb on - strand, within frlAat 2981.719 kb on + strand, within frlAat 2981.719 kb on + strand, within frlAat 2981.720 kb on - strand, within frlAat 2981.720 kb on - strand, within frlAat 2981.720 kb on - strand, within frlAat 2981.720 kb on - strand, within frlAat 2981.720 kb on - strand, within frlAat 2981.720 kb on - strand, within frlAat 2981.720 kb on - strand, within frlAat 2981.720 kb on - strand, within frlAat 2981.744 kb on - strand, within frlAat 2981.815 kb on + strandat 2981.935 kb on + strandat 2981.935 kb on + strandat 2981.935 kb on + strandat 2981.936 kb on - strandat 2981.957 kb on + strandat 2982.121 kb on + strandat 2982.121 kb on + strandat 2982.123 kb on + strandat 2982.123 kb on + strandat 2982.123 kb on + strandat 2982.123 kb on + strandat 2982.124 kb on - strandat 2982.124 kb on - strandat 2982.124 kb on - strandat 2982.124 kb on - strandat 2982.124 kb on - strandat 2982.124 kb on - strandat 2982.133 kb on + strandat 2982.133 kb on + strandat 2982.133 kb on + strandat 2982.134 kb on - strandat 2982.168 kb on + strandat 2982.201 kb on + strandat 2982.201 kb on + strandat 2982.202 kb on - strandat 2982.202 kb on - strandat 2982.211 kb on + strandat 2982.236 kb on - strand, within yhfLat 2982.270 kb on + strand, within yhfLat 2982.271 kb on - strand, within yhfLat 2982.283 kb on + strand, within yhfLat 2982.307 kb on + strand, within yhfLat 2982.307 kb on + strand, within yhfLat 2982.307 kb on + strand, within yhfLat 2982.329 kb on + strand, within yhfLat 2982.378 kb on + strandat 2982.382 kb on + strandat 2982.382 kb on + strandat 2982.383 kb on - strandat 2982.385 kb on + strandat 2982.388 kb on - strandat 2982.388 kb on - strandat 2982.411 kb on - strandat 2982.412 kb on + strandat 2982.419 kb on - strandat 2982.421 kb on - strandat 2982.511 kb on + strandat 2982.568 kb on + strandat 2982.568 kb on + strandat 2982.570 kb on + strandat 2982.584 kb on + strandat 2982.676 kb on - strandat 2982.678 kb on + strandat 2982.679 kb on - strandat 2982.694 kb on - strandat 2982.694 kb on - strandat 2982.828 kb on + strand, within cysGat 2982.828 kb on + strand, within cysGat 2982.854 kb on + strand, within cysGat 2982.854 kb on + strand, within cysGat 2982.854 kb on + strand, within cysGat 2982.854 kb on + strand, within cysGat 2982.854 kb on + strand, within cysGat 2982.854 kb on + strand, within cysGat 2982.854 kb on + strand, within cysGat 2982.854 kb on + strand, within cysGat 2982.854 kb on + strand, within cysGat 2982.855 kb on - strand, within cysGat 2982.855 kb on - strand, within cysGat 2982.855 kb on - strand, within cysGat 2982.916 kb on + strand, within cysGat 2982.916 kb on + strand, within cysGat 2982.927 kb on + strand, within cysGat 2982.931 kb on + strand, within cysGat 2982.931 kb on + strand, within cysGat 2982.931 kb on + strand, within cysGat 2982.932 kb on - strand, within cysGat 2982.932 kb on - strand, within cysGat 2982.932 kb on - strand, within cysGat 2982.932 kb on - strand, within cysGat 2982.932 kb on - strand, within cysGat 2982.950 kb on + strand, within cysGat 2982.950 kb on + strand, within cysGat 2982.951 kb on - strand, within cysGat 2983.175 kb on + strand, within cysGat 2983.230 kb on + strand, within cysGat 2983.231 kb on - strand, within cysGat 2983.233 kb on + strand, within cysGat 2983.233 kb on + strand, within cysGat 2983.257 kb on - strand, within cysG

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose
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2,981,256 + frlA NIAGMN_14940 0.51 -0.4
2,981,257 - frlA NIAGMN_14940 0.52 -0.1
2,981,257 - frlA NIAGMN_14940 0.52 +0.7
2,981,257 - frlA NIAGMN_14940 0.52 -0.9
2,981,257 - frlA NIAGMN_14940 0.52 -1.1
2,981,258 + frlA NIAGMN_14940 0.52 -1.6
2,981,258 + frlA NIAGMN_14940 0.52 +0.8
2,981,258 + frlA NIAGMN_14940 0.52 -1.0
2,981,258 + frlA NIAGMN_14940 0.52 +0.2
2,981,259 - frlA NIAGMN_14940 0.52 +0.3
2,981,259 - frlA NIAGMN_14940 0.52 -0.4
2,981,259 - frlA NIAGMN_14940 0.52 -0.4
2,981,259 - frlA NIAGMN_14940 0.52 +0.2
2,981,266 - frlA NIAGMN_14940 0.52 -0.2
2,981,282 + frlA NIAGMN_14940 0.53 +0.7
2,981,282 + frlA NIAGMN_14940 0.53 +0.2
2,981,282 + frlA NIAGMN_14940 0.53 -0.5
2,981,283 - frlA NIAGMN_14940 0.54 -1.2
2,981,283 - frlA NIAGMN_14940 0.54 +0.1
2,981,380 - frlA NIAGMN_14940 0.61 -0.5
2,981,436 + frlA NIAGMN_14940 0.65 +0.2
2,981,436 + frlA NIAGMN_14940 0.65 -0.4
2,981,437 - frlA NIAGMN_14940 0.65 +0.4
2,981,437 - frlA NIAGMN_14940 0.65 +1.4
2,981,437 - frlA NIAGMN_14940 0.65 -0.3
2,981,437 - frlA NIAGMN_14940 0.65 -0.1
2,981,440 + frlA NIAGMN_14940 0.65 +0.6
2,981,440 + frlA NIAGMN_14940 0.65 +0.2
2,981,490 + frlA NIAGMN_14940 0.69 +0.2
2,981,490 + frlA NIAGMN_14940 0.69 -1.1
2,981,491 - frlA NIAGMN_14940 0.69 +3.1
2,981,499 + frlA NIAGMN_14940 0.70 +0.4
2,981,503 + frlA NIAGMN_14940 0.70 -0.7
2,981,503 + frlA NIAGMN_14940 0.70 -0.1
2,981,523 + frlA NIAGMN_14940 0.71 -0.2
2,981,669 + frlA NIAGMN_14940 0.82 -0.5
2,981,675 + frlA NIAGMN_14940 0.83 +0.6
2,981,707 + frlA NIAGMN_14940 0.85 -1.0
2,981,708 - frlA NIAGMN_14940 0.85 -2.0
2,981,718 - frlA NIAGMN_14940 0.86 +1.1
2,981,718 - frlA NIAGMN_14940 0.86 +0.7
2,981,719 + frlA NIAGMN_14940 0.86 +0.3
2,981,719 + frlA NIAGMN_14940 0.86 -1.3
2,981,720 - frlA NIAGMN_14940 0.86 +0.5
2,981,720 - frlA NIAGMN_14940 0.86 -0.1
2,981,720 - frlA NIAGMN_14940 0.86 -0.3
2,981,720 - frlA NIAGMN_14940 0.86 -0.2
2,981,720 - frlA NIAGMN_14940 0.86 -1.2
2,981,720 - frlA NIAGMN_14940 0.86 +0.1
2,981,720 - frlA NIAGMN_14940 0.86 +0.5
2,981,720 - frlA NIAGMN_14940 0.86 -0.9
2,981,744 - frlA NIAGMN_14940 0.88 +1.7
2,981,815 + -0.1
2,981,935 + +0.1
2,981,935 + -1.0
2,981,935 + -0.8
2,981,936 - +0.0
2,981,957 + +1.0
2,982,121 + +0.0
2,982,121 + +0.7
2,982,123 + -0.0
2,982,123 + -0.0
2,982,123 + +0.1
2,982,123 + +0.0
2,982,124 - +0.1
2,982,124 - -0.3
2,982,124 - +0.1
2,982,124 - -0.0
2,982,124 - -0.0
2,982,124 - -0.7
2,982,133 + +0.5
2,982,133 + -0.2
2,982,133 + +0.3
2,982,134 - -1.3
2,982,168 + -0.9
2,982,201 + -0.8
2,982,201 + +0.5
2,982,202 - -2.1
2,982,202 - -0.1
2,982,211 + +0.8
2,982,236 - yhfL NIAGMN_14945 0.21 +0.6
2,982,270 + yhfL NIAGMN_14945 0.42 +0.5
2,982,271 - yhfL NIAGMN_14945 0.42 -0.0
2,982,283 + yhfL NIAGMN_14945 0.49 -1.3
2,982,307 + yhfL NIAGMN_14945 0.64 +1.2
2,982,307 + yhfL NIAGMN_14945 0.64 +0.7
2,982,307 + yhfL NIAGMN_14945 0.64 -0.7
2,982,329 + yhfL NIAGMN_14945 0.77 +0.0
2,982,378 + -0.7
2,982,382 + -1.8
2,982,382 + +0.5
2,982,383 - -0.5
2,982,385 + +0.7
2,982,388 - -1.2
2,982,388 - +0.2
2,982,411 - +0.3
2,982,412 + +0.3
2,982,419 - +0.5
2,982,421 - +0.3
2,982,511 + +1.1
2,982,568 + -1.3
2,982,568 + +0.7
2,982,570 + +0.5
2,982,584 + -0.3
2,982,676 - -3.0
2,982,678 + -2.7
2,982,679 - -1.5
2,982,694 - -3.5
2,982,694 - -3.4
2,982,828 + cysG NIAGMN_14950 0.15 -2.8
2,982,828 + cysG NIAGMN_14950 0.15 -4.2
2,982,854 + cysG NIAGMN_14950 0.17 -1.8
2,982,854 + cysG NIAGMN_14950 0.17 -2.3
2,982,854 + cysG NIAGMN_14950 0.17 -3.0
2,982,854 + cysG NIAGMN_14950 0.17 -0.0
2,982,854 + cysG NIAGMN_14950 0.17 -3.9
2,982,854 + cysG NIAGMN_14950 0.17 -2.3
2,982,854 + cysG NIAGMN_14950 0.17 -1.8
2,982,854 + cysG NIAGMN_14950 0.17 -0.5
2,982,854 + cysG NIAGMN_14950 0.17 -2.3
2,982,855 - cysG NIAGMN_14950 0.17 -3.1
2,982,855 - cysG NIAGMN_14950 0.17 -3.2
2,982,855 - cysG NIAGMN_14950 0.17 -0.5
2,982,916 + cysG NIAGMN_14950 0.21 -0.6
2,982,916 + cysG NIAGMN_14950 0.21 -1.6
2,982,927 + cysG NIAGMN_14950 0.22 -1.9
2,982,931 + cysG NIAGMN_14950 0.22 -4.0
2,982,931 + cysG NIAGMN_14950 0.22 -1.5
2,982,931 + cysG NIAGMN_14950 0.22 -2.6
2,982,932 - cysG NIAGMN_14950 0.23 -2.6
2,982,932 - cysG NIAGMN_14950 0.23 -2.2
2,982,932 - cysG NIAGMN_14950 0.23 -0.9
2,982,932 - cysG NIAGMN_14950 0.23 -2.5
2,982,932 - cysG NIAGMN_14950 0.23 -3.4
2,982,950 + cysG NIAGMN_14950 0.24 -3.5
2,982,950 + cysG NIAGMN_14950 0.24 -3.2
2,982,951 - cysG NIAGMN_14950 0.24 -2.7
2,983,175 + cysG NIAGMN_14950 0.40 -3.9
2,983,230 + cysG NIAGMN_14950 0.44 -4.3
2,983,231 - cysG NIAGMN_14950 0.44 -2.5
2,983,233 + cysG NIAGMN_14950 0.44 -1.7
2,983,233 + cysG NIAGMN_14950 0.44 -2.1
2,983,257 - cysG NIAGMN_14950 0.46 -3.0

Or see this region's nucleotide sequence