Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt frlA and yhfL are separated by 295 nucleotides yhfL and cysG are separated by 254 nucleotides
NIAGMN_14940: frlA - fructoselysine/psicoselysine transporter, at 2,980,567 to 2,981,904
frlA
NIAGMN_14945: yhfL - Uncharacterized protein YhfL, at 2,982,200 to 2,982,367
yhfL
NIAGMN_14950: cysG - siroheme synthase CysG, at 2,982,622 to 2,983,995
cysG
Position (kb)
2982
2983 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2981.256 kb on + strand, within frlA at 2981.257 kb on - strand, within frlA at 2981.257 kb on - strand, within frlA at 2981.257 kb on - strand, within frlA at 2981.257 kb on - strand, within frlA at 2981.258 kb on + strand, within frlA at 2981.258 kb on + strand, within frlA at 2981.258 kb on + strand, within frlA at 2981.258 kb on + strand, within frlA at 2981.259 kb on - strand, within frlA at 2981.259 kb on - strand, within frlA at 2981.259 kb on - strand, within frlA at 2981.259 kb on - strand, within frlA at 2981.266 kb on - strand, within frlA at 2981.282 kb on + strand, within frlA at 2981.282 kb on + strand, within frlA at 2981.282 kb on + strand, within frlA at 2981.283 kb on - strand, within frlA at 2981.283 kb on - strand, within frlA at 2981.380 kb on - strand, within frlA at 2981.436 kb on + strand, within frlA at 2981.436 kb on + strand, within frlA at 2981.437 kb on - strand, within frlA at 2981.437 kb on - strand, within frlA at 2981.437 kb on - strand, within frlA at 2981.437 kb on - strand, within frlA at 2981.440 kb on + strand, within frlA at 2981.440 kb on + strand, within frlA at 2981.490 kb on + strand, within frlA at 2981.490 kb on + strand, within frlA at 2981.491 kb on - strand, within frlA at 2981.499 kb on + strand, within frlA at 2981.503 kb on + strand, within frlA at 2981.503 kb on + strand, within frlA at 2981.523 kb on + strand, within frlA at 2981.669 kb on + strand, within frlA at 2981.675 kb on + strand, within frlA at 2981.707 kb on + strand, within frlA at 2981.708 kb on - strand, within frlA at 2981.718 kb on - strand, within frlA at 2981.718 kb on - strand, within frlA at 2981.719 kb on + strand, within frlA at 2981.719 kb on + strand, within frlA at 2981.720 kb on - strand, within frlA at 2981.720 kb on - strand, within frlA at 2981.720 kb on - strand, within frlA at 2981.720 kb on - strand, within frlA at 2981.720 kb on - strand, within frlA at 2981.720 kb on - strand, within frlA at 2981.720 kb on - strand, within frlA at 2981.720 kb on - strand, within frlA at 2981.744 kb on - strand, within frlA at 2981.815 kb on + strand at 2981.935 kb on + strand at 2981.935 kb on + strand at 2981.935 kb on + strand at 2981.936 kb on - strand at 2981.957 kb on + strand at 2982.121 kb on + strand at 2982.121 kb on + strand at 2982.123 kb on + strand at 2982.123 kb on + strand at 2982.123 kb on + strand at 2982.123 kb on + strand at 2982.124 kb on - strand at 2982.124 kb on - strand at 2982.124 kb on - strand at 2982.124 kb on - strand at 2982.124 kb on - strand at 2982.124 kb on - strand at 2982.133 kb on + strand at 2982.133 kb on + strand at 2982.133 kb on + strand at 2982.134 kb on - strand at 2982.168 kb on + strand at 2982.201 kb on + strand at 2982.201 kb on + strand at 2982.202 kb on - strand at 2982.202 kb on - strand at 2982.211 kb on + strand at 2982.236 kb on - strand, within yhfL at 2982.270 kb on + strand, within yhfL at 2982.271 kb on - strand, within yhfL at 2982.283 kb on + strand, within yhfL at 2982.307 kb on + strand, within yhfL at 2982.307 kb on + strand, within yhfL at 2982.307 kb on + strand, within yhfL at 2982.329 kb on + strand, within yhfL at 2982.378 kb on + strand at 2982.382 kb on + strand at 2982.382 kb on + strand at 2982.383 kb on - strand at 2982.385 kb on + strand at 2982.388 kb on - strand at 2982.388 kb on - strand at 2982.411 kb on - strand at 2982.412 kb on + strand at 2982.419 kb on - strand at 2982.421 kb on - strand at 2982.511 kb on + strand at 2982.568 kb on + strand at 2982.568 kb on + strand at 2982.570 kb on + strand at 2982.584 kb on + strand at 2982.676 kb on - strand at 2982.678 kb on + strand at 2982.679 kb on - strand at 2982.694 kb on - strand at 2982.694 kb on - strand at 2982.828 kb on + strand, within cysG at 2982.828 kb on + strand, within cysG at 2982.854 kb on + strand, within cysG at 2982.854 kb on + strand, within cysG at 2982.854 kb on + strand, within cysG at 2982.854 kb on + strand, within cysG at 2982.854 kb on + strand, within cysG at 2982.854 kb on + strand, within cysG at 2982.854 kb on + strand, within cysG at 2982.854 kb on + strand, within cysG at 2982.854 kb on + strand, within cysG at 2982.855 kb on - strand, within cysG at 2982.855 kb on - strand, within cysG at 2982.855 kb on - strand, within cysG at 2982.916 kb on + strand, within cysG at 2982.916 kb on + strand, within cysG at 2982.927 kb on + strand, within cysG at 2982.931 kb on + strand, within cysG at 2982.931 kb on + strand, within cysG at 2982.931 kb on + strand, within cysG at 2982.932 kb on - strand, within cysG at 2982.932 kb on - strand, within cysG at 2982.932 kb on - strand, within cysG at 2982.932 kb on - strand, within cysG at 2982.932 kb on - strand, within cysG at 2982.950 kb on + strand, within cysG at 2982.950 kb on + strand, within cysG at 2982.951 kb on - strand, within cysG at 2983.175 kb on + strand, within cysG at 2983.230 kb on + strand, within cysG at 2983.231 kb on - strand, within cysG at 2983.233 kb on + strand, within cysG at 2983.233 kb on + strand, within cysG at 2983.257 kb on - strand, within cysG
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 2,981,256 + frlA NIAGMN_14940 0.51 -0.4 2,981,257 - frlA NIAGMN_14940 0.52 -0.1 2,981,257 - frlA NIAGMN_14940 0.52 +0.7 2,981,257 - frlA NIAGMN_14940 0.52 -0.9 2,981,257 - frlA NIAGMN_14940 0.52 -1.1 2,981,258 + frlA NIAGMN_14940 0.52 -1.6 2,981,258 + frlA NIAGMN_14940 0.52 +0.8 2,981,258 + frlA NIAGMN_14940 0.52 -1.0 2,981,258 + frlA NIAGMN_14940 0.52 +0.2 2,981,259 - frlA NIAGMN_14940 0.52 +0.3 2,981,259 - frlA NIAGMN_14940 0.52 -0.4 2,981,259 - frlA NIAGMN_14940 0.52 -0.4 2,981,259 - frlA NIAGMN_14940 0.52 +0.2 2,981,266 - frlA NIAGMN_14940 0.52 -0.2 2,981,282 + frlA NIAGMN_14940 0.53 +0.7 2,981,282 + frlA NIAGMN_14940 0.53 +0.2 2,981,282 + frlA NIAGMN_14940 0.53 -0.5 2,981,283 - frlA NIAGMN_14940 0.54 -1.2 2,981,283 - frlA NIAGMN_14940 0.54 +0.1 2,981,380 - frlA NIAGMN_14940 0.61 -0.5 2,981,436 + frlA NIAGMN_14940 0.65 +0.2 2,981,436 + frlA NIAGMN_14940 0.65 -0.4 2,981,437 - frlA NIAGMN_14940 0.65 +0.4 2,981,437 - frlA NIAGMN_14940 0.65 +1.4 2,981,437 - frlA NIAGMN_14940 0.65 -0.3 2,981,437 - frlA NIAGMN_14940 0.65 -0.1 2,981,440 + frlA NIAGMN_14940 0.65 +0.6 2,981,440 + frlA NIAGMN_14940 0.65 +0.2 2,981,490 + frlA NIAGMN_14940 0.69 +0.2 2,981,490 + frlA NIAGMN_14940 0.69 -1.1 2,981,491 - frlA NIAGMN_14940 0.69 +3.1 2,981,499 + frlA NIAGMN_14940 0.70 +0.4 2,981,503 + frlA NIAGMN_14940 0.70 -0.7 2,981,503 + frlA NIAGMN_14940 0.70 -0.1 2,981,523 + frlA NIAGMN_14940 0.71 -0.2 2,981,669 + frlA NIAGMN_14940 0.82 -0.5 2,981,675 + frlA NIAGMN_14940 0.83 +0.6 2,981,707 + frlA NIAGMN_14940 0.85 -1.0 2,981,708 - frlA NIAGMN_14940 0.85 -2.0 2,981,718 - frlA NIAGMN_14940 0.86 +1.1 2,981,718 - frlA NIAGMN_14940 0.86 +0.7 2,981,719 + frlA NIAGMN_14940 0.86 +0.3 2,981,719 + frlA NIAGMN_14940 0.86 -1.3 2,981,720 - frlA NIAGMN_14940 0.86 +0.5 2,981,720 - frlA NIAGMN_14940 0.86 -0.1 2,981,720 - frlA NIAGMN_14940 0.86 -0.3 2,981,720 - frlA NIAGMN_14940 0.86 -0.2 2,981,720 - frlA NIAGMN_14940 0.86 -1.2 2,981,720 - frlA NIAGMN_14940 0.86 +0.1 2,981,720 - frlA NIAGMN_14940 0.86 +0.5 2,981,720 - frlA NIAGMN_14940 0.86 -0.9 2,981,744 - frlA NIAGMN_14940 0.88 +1.7 2,981,815 + -0.1 2,981,935 + +0.1 2,981,935 + -1.0 2,981,935 + -0.8 2,981,936 - +0.0 2,981,957 + +1.0 2,982,121 + +0.0 2,982,121 + +0.7 2,982,123 + -0.0 2,982,123 + -0.0 2,982,123 + +0.1 2,982,123 + +0.0 2,982,124 - +0.1 2,982,124 - -0.3 2,982,124 - +0.1 2,982,124 - -0.0 2,982,124 - -0.0 2,982,124 - -0.7 2,982,133 + +0.5 2,982,133 + -0.2 2,982,133 + +0.3 2,982,134 - -1.3 2,982,168 + -0.9 2,982,201 + -0.8 2,982,201 + +0.5 2,982,202 - -2.1 2,982,202 - -0.1 2,982,211 + +0.8 2,982,236 - yhfL NIAGMN_14945 0.21 +0.6 2,982,270 + yhfL NIAGMN_14945 0.42 +0.5 2,982,271 - yhfL NIAGMN_14945 0.42 -0.0 2,982,283 + yhfL NIAGMN_14945 0.49 -1.3 2,982,307 + yhfL NIAGMN_14945 0.64 +1.2 2,982,307 + yhfL NIAGMN_14945 0.64 +0.7 2,982,307 + yhfL NIAGMN_14945 0.64 -0.7 2,982,329 + yhfL NIAGMN_14945 0.77 +0.0 2,982,378 + -0.7 2,982,382 + -1.8 2,982,382 + +0.5 2,982,383 - -0.5 2,982,385 + +0.7 2,982,388 - -1.2 2,982,388 - +0.2 2,982,411 - +0.3 2,982,412 + +0.3 2,982,419 - +0.5 2,982,421 - +0.3 2,982,511 + +1.1 2,982,568 + -1.3 2,982,568 + +0.7 2,982,570 + +0.5 2,982,584 + -0.3 2,982,676 - -3.0 2,982,678 + -2.7 2,982,679 - -1.5 2,982,694 - -3.5 2,982,694 - -3.4 2,982,828 + cysG NIAGMN_14950 0.15 -2.8 2,982,828 + cysG NIAGMN_14950 0.15 -4.2 2,982,854 + cysG NIAGMN_14950 0.17 -1.8 2,982,854 + cysG NIAGMN_14950 0.17 -2.3 2,982,854 + cysG NIAGMN_14950 0.17 -3.0 2,982,854 + cysG NIAGMN_14950 0.17 -0.0 2,982,854 + cysG NIAGMN_14950 0.17 -3.9 2,982,854 + cysG NIAGMN_14950 0.17 -2.3 2,982,854 + cysG NIAGMN_14950 0.17 -1.8 2,982,854 + cysG NIAGMN_14950 0.17 -0.5 2,982,854 + cysG NIAGMN_14950 0.17 -2.3 2,982,855 - cysG NIAGMN_14950 0.17 -3.1 2,982,855 - cysG NIAGMN_14950 0.17 -3.2 2,982,855 - cysG NIAGMN_14950 0.17 -0.5 2,982,916 + cysG NIAGMN_14950 0.21 -0.6 2,982,916 + cysG NIAGMN_14950 0.21 -1.6 2,982,927 + cysG NIAGMN_14950 0.22 -1.9 2,982,931 + cysG NIAGMN_14950 0.22 -4.0 2,982,931 + cysG NIAGMN_14950 0.22 -1.5 2,982,931 + cysG NIAGMN_14950 0.22 -2.6 2,982,932 - cysG NIAGMN_14950 0.23 -2.6 2,982,932 - cysG NIAGMN_14950 0.23 -2.2 2,982,932 - cysG NIAGMN_14950 0.23 -0.9 2,982,932 - cysG NIAGMN_14950 0.23 -2.5 2,982,932 - cysG NIAGMN_14950 0.23 -3.4 2,982,950 + cysG NIAGMN_14950 0.24 -3.5 2,982,950 + cysG NIAGMN_14950 0.24 -3.2 2,982,951 - cysG NIAGMN_14950 0.24 -2.7 2,983,175 + cysG NIAGMN_14950 0.40 -3.9 2,983,230 + cysG NIAGMN_14950 0.44 -4.3 2,983,231 - cysG NIAGMN_14950 0.44 -2.5 2,983,233 + cysG NIAGMN_14950 0.44 -1.7 2,983,233 + cysG NIAGMN_14950 0.44 -2.1 2,983,257 - cysG NIAGMN_14950 0.46 -3.0
Or see this region's nucleotide sequence