Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt NIAGMN_14760 and gntX are separated by 58 nucleotides gntX and bioH are separated by 37 nucleotides bioH and rpnA are separated by 26 nucleotides
NIAGMN_14760: NIAGMN_14760 - NfuA family Fe-S biogenesis protein, at 2,943,357 to 2,943,932
_14760
NIAGMN_14765: gntX - DNA utilization protein GntX, at 2,943,991 to 2,944,674
gntX
NIAGMN_14770: bioH - pimeloyl-ACP methyl ester esterase BioH, at 2,944,712 to 2,945,482
bioH
NIAGMN_14775: rpnA - recombination-promoting nuclease RpnA, at 2,945,509 to 2,946,387
rpnA
Position (kb)
2944
2945
2946 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2943.718 kb on + strand, within NIAGMN_14760 at 2943.718 kb on + strand, within NIAGMN_14760 at 2943.729 kb on + strand, within NIAGMN_14760 at 2943.805 kb on + strand, within NIAGMN_14760 at 2943.923 kb on + strand at 2943.924 kb on - strand at 2943.932 kb on + strand at 2943.933 kb on - strand at 2943.933 kb on - strand at 2943.935 kb on + strand at 2943.935 kb on + strand at 2943.936 kb on - strand at 2943.936 kb on - strand at 2943.936 kb on - strand at 2943.936 kb on - strand at 2943.947 kb on - strand at 2943.968 kb on - strand at 2943.992 kb on + strand at 2943.993 kb on - strand at 2943.993 kb on - strand at 2944.043 kb on - strand at 2944.071 kb on + strand, within gntX at 2944.071 kb on + strand, within gntX at 2944.108 kb on - strand, within gntX at 2944.108 kb on - strand, within gntX at 2944.206 kb on + strand, within gntX at 2944.206 kb on + strand, within gntX at 2944.206 kb on + strand, within gntX at 2944.206 kb on + strand, within gntX at 2944.207 kb on - strand, within gntX at 2944.281 kb on + strand, within gntX at 2944.282 kb on - strand, within gntX at 2944.282 kb on - strand, within gntX at 2944.329 kb on + strand, within gntX at 2944.329 kb on + strand, within gntX at 2944.329 kb on + strand, within gntX at 2944.330 kb on - strand, within gntX at 2944.369 kb on + strand, within gntX at 2944.370 kb on - strand, within gntX at 2944.370 kb on - strand, within gntX at 2944.370 kb on - strand, within gntX at 2944.381 kb on + strand, within gntX at 2944.382 kb on - strand, within gntX at 2944.384 kb on + strand, within gntX at 2944.384 kb on + strand, within gntX at 2944.431 kb on + strand, within gntX at 2944.432 kb on - strand, within gntX at 2944.467 kb on - strand, within gntX at 2944.575 kb on + strand, within gntX at 2944.575 kb on + strand, within gntX at 2944.576 kb on - strand, within gntX at 2944.624 kb on + strand at 2944.624 kb on + strand at 2944.624 kb on + strand at 2944.624 kb on + strand at 2944.625 kb on - strand at 2944.625 kb on - strand at 2944.625 kb on - strand at 2944.625 kb on - strand at 2944.654 kb on + strand at 2944.674 kb on + strand at 2944.674 kb on + strand at 2944.674 kb on + strand at 2944.674 kb on + strand at 2944.674 kb on + strand at 2944.674 kb on + strand at 2944.675 kb on - strand at 2944.675 kb on - strand at 2944.675 kb on - strand at 2944.675 kb on - strand at 2944.675 kb on - strand at 2944.675 kb on - strand at 2944.675 kb on - strand at 2944.688 kb on + strand at 2944.688 kb on + strand at 2944.689 kb on - strand at 2944.706 kb on + strand at 2944.707 kb on - strand at 2944.717 kb on + strand at 2944.717 kb on + strand at 2944.717 kb on + strand at 2944.717 kb on + strand at 2944.718 kb on - strand at 2944.820 kb on - strand, within bioH at 2944.820 kb on - strand, within bioH at 2945.070 kb on + strand, within bioH at 2945.071 kb on - strand, within bioH at 2945.125 kb on + strand, within bioH at 2945.149 kb on - strand, within bioH at 2945.318 kb on + strand, within bioH at 2945.318 kb on + strand, within bioH at 2945.318 kb on + strand, within bioH at 2945.318 kb on + strand, within bioH at 2945.319 kb on - strand, within bioH at 2945.319 kb on - strand, within bioH at 2945.319 kb on - strand, within bioH at 2945.319 kb on - strand, within bioH at 2945.319 kb on - strand, within bioH at 2945.319 kb on - strand, within bioH at 2945.368 kb on + strand, within bioH at 2945.393 kb on + strand, within bioH at 2945.393 kb on + strand, within bioH at 2945.393 kb on + strand, within bioH at 2945.393 kb on + strand, within bioH at 2945.393 kb on + strand, within bioH at 2945.393 kb on + strand, within bioH at 2945.393 kb on + strand, within bioH at 2945.393 kb on + strand, within bioH at 2945.393 kb on + strand, within bioH at 2945.394 kb on - strand, within bioH at 2945.394 kb on - strand, within bioH at 2945.394 kb on - strand, within bioH at 2945.394 kb on - strand, within bioH at 2945.394 kb on - strand, within bioH at 2945.394 kb on - strand, within bioH at 2945.425 kb on + strand at 2945.425 kb on + strand at 2945.480 kb on + strand at 2945.481 kb on - strand at 2945.551 kb on - strand at 2945.593 kb on + strand at 2945.594 kb on - strand at 2945.594 kb on - strand at 2945.603 kb on - strand, within rpnA at 2945.604 kb on + strand, within rpnA at 2945.605 kb on - strand, within rpnA at 2945.605 kb on - strand, within rpnA at 2945.605 kb on - strand, within rpnA at 2945.605 kb on - strand, within rpnA at 2945.605 kb on - strand, within rpnA at 2945.605 kb on - strand, within rpnA at 2945.652 kb on + strand, within rpnA at 2945.653 kb on - strand, within rpnA at 2945.740 kb on + strand, within rpnA at 2945.740 kb on + strand, within rpnA at 2945.740 kb on + strand, within rpnA at 2945.741 kb on - strand, within rpnA at 2945.741 kb on - strand, within rpnA at 2945.741 kb on - strand, within rpnA at 2945.744 kb on + strand, within rpnA at 2945.744 kb on + strand, within rpnA at 2945.745 kb on - strand, within rpnA at 2945.745 kb on - strand, within rpnA at 2945.748 kb on + strand, within rpnA at 2945.749 kb on - strand, within rpnA at 2945.749 kb on - strand, within rpnA at 2945.788 kb on - strand, within rpnA at 2945.791 kb on + strand, within rpnA at 2945.791 kb on + strand, within rpnA at 2945.791 kb on + strand, within rpnA at 2945.791 kb on + strand, within rpnA at 2945.791 kb on + strand, within rpnA at 2945.791 kb on + strand, within rpnA at 2945.792 kb on - strand, within rpnA at 2945.792 kb on - strand, within rpnA at 2945.792 kb on - strand, within rpnA at 2945.794 kb on + strand, within rpnA at 2945.794 kb on + strand, within rpnA at 2945.794 kb on + strand, within rpnA at 2945.794 kb on + strand, within rpnA at 2945.795 kb on - strand, within rpnA at 2945.795 kb on - strand, within rpnA at 2945.795 kb on - strand, within rpnA at 2945.795 kb on - strand, within rpnA at 2945.813 kb on - strand, within rpnA at 2945.841 kb on + strand, within rpnA at 2945.842 kb on - strand, within rpnA at 2945.842 kb on - strand, within rpnA at 2945.842 kb on - strand, within rpnA at 2945.855 kb on - strand, within rpnA at 2945.855 kb on - strand, within rpnA at 2945.855 kb on - strand, within rpnA at 2945.913 kb on + strand, within rpnA at 2945.939 kb on + strand, within rpnA at 2945.939 kb on + strand, within rpnA at 2945.939 kb on + strand, within rpnA at 2945.940 kb on - strand, within rpnA at 2945.940 kb on - strand, within rpnA at 2945.940 kb on - strand, within rpnA at 2945.940 kb on - strand, within rpnA at 2945.994 kb on - strand, within rpnA at 2946.020 kb on + strand, within rpnA at 2946.021 kb on - strand, within rpnA at 2946.021 kb on - strand, within rpnA at 2946.090 kb on + strand, within rpnA at 2946.155 kb on + strand, within rpnA at 2946.155 kb on + strand, within rpnA at 2946.155 kb on + strand, within rpnA at 2946.155 kb on + strand, within rpnA at 2946.155 kb on + strand, within rpnA at 2946.155 kb on + strand, within rpnA at 2946.155 kb on + strand, within rpnA at 2946.155 kb on + strand, within rpnA at 2946.155 kb on + strand, within rpnA at 2946.155 kb on + strand, within rpnA at 2946.156 kb on - strand, within rpnA at 2946.156 kb on - strand, within rpnA at 2946.156 kb on - strand, within rpnA at 2946.161 kb on + strand, within rpnA at 2946.161 kb on + strand, within rpnA at 2946.161 kb on + strand, within rpnA at 2946.161 kb on + strand, within rpnA at 2946.161 kb on + strand, within rpnA at 2946.161 kb on + strand, within rpnA at 2946.161 kb on + strand, within rpnA at 2946.161 kb on + strand, within rpnA at 2946.162 kb on - strand, within rpnA at 2946.162 kb on - strand, within rpnA at 2946.162 kb on - strand, within rpnA at 2946.231 kb on + strand, within rpnA at 2946.292 kb on + strand, within rpnA at 2946.292 kb on + strand, within rpnA at 2946.292 kb on + strand, within rpnA at 2946.424 kb on + strand at 2946.424 kb on + strand at 2946.450 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 2,943,718 + NIAGMN_14760 0.63 -1.9 2,943,718 + NIAGMN_14760 0.63 -2.4 2,943,729 + NIAGMN_14760 0.65 +0.4 2,943,805 + NIAGMN_14760 0.78 -0.1 2,943,923 + -0.1 2,943,924 - -0.7 2,943,932 + -2.3 2,943,933 - -1.8 2,943,933 - -2.6 2,943,935 + +1.4 2,943,935 + +1.9 2,943,936 - -2.8 2,943,936 - +0.1 2,943,936 - -0.4 2,943,936 - -0.4 2,943,947 - +0.0 2,943,968 - +0.1 2,943,992 + +2.1 2,943,993 - -1.5 2,943,993 - -2.6 2,944,043 - +0.9 2,944,071 + gntX NIAGMN_14765 0.12 +1.2 2,944,071 + gntX NIAGMN_14765 0.12 -0.3 2,944,108 - gntX NIAGMN_14765 0.17 +0.3 2,944,108 - gntX NIAGMN_14765 0.17 -0.8 2,944,206 + gntX NIAGMN_14765 0.31 -0.5 2,944,206 + gntX NIAGMN_14765 0.31 -0.6 2,944,206 + gntX NIAGMN_14765 0.31 -0.5 2,944,206 + gntX NIAGMN_14765 0.31 +0.8 2,944,207 - gntX NIAGMN_14765 0.32 +0.5 2,944,281 + gntX NIAGMN_14765 0.42 +0.2 2,944,282 - gntX NIAGMN_14765 0.43 +0.1 2,944,282 - gntX NIAGMN_14765 0.43 -0.3 2,944,329 + gntX NIAGMN_14765 0.49 -0.0 2,944,329 + gntX NIAGMN_14765 0.49 +0.2 2,944,329 + gntX NIAGMN_14765 0.49 +0.3 2,944,330 - gntX NIAGMN_14765 0.50 +0.0 2,944,369 + gntX NIAGMN_14765 0.55 -1.0 2,944,370 - gntX NIAGMN_14765 0.55 -0.3 2,944,370 - gntX NIAGMN_14765 0.55 +0.3 2,944,370 - gntX NIAGMN_14765 0.55 +0.6 2,944,381 + gntX NIAGMN_14765 0.57 -0.4 2,944,382 - gntX NIAGMN_14765 0.57 +0.1 2,944,384 + gntX NIAGMN_14765 0.57 +0.0 2,944,384 + gntX NIAGMN_14765 0.57 +0.2 2,944,431 + gntX NIAGMN_14765 0.64 -2.8 2,944,432 - gntX NIAGMN_14765 0.64 -1.2 2,944,467 - gntX NIAGMN_14765 0.70 -1.0 2,944,575 + gntX NIAGMN_14765 0.85 +0.1 2,944,575 + gntX NIAGMN_14765 0.85 +0.1 2,944,576 - gntX NIAGMN_14765 0.86 +0.1 2,944,624 + +0.4 2,944,624 + +0.0 2,944,624 + +0.9 2,944,624 + +1.6 2,944,625 - +0.5 2,944,625 - +0.0 2,944,625 - -1.0 2,944,625 - -3.1 2,944,654 + +0.4 2,944,674 + +0.0 2,944,674 + -1.3 2,944,674 + +0.0 2,944,674 + +1.4 2,944,674 + -1.8 2,944,674 + -1.8 2,944,675 - +0.5 2,944,675 - -0.8 2,944,675 - -0.2 2,944,675 - -0.4 2,944,675 - +0.1 2,944,675 - -0.0 2,944,675 - -0.5 2,944,688 + +0.0 2,944,688 + +0.0 2,944,689 - +0.4 2,944,706 + +0.1 2,944,707 - -0.2 2,944,717 + +0.2 2,944,717 + -1.0 2,944,717 + -1.0 2,944,717 + -1.0 2,944,718 - -0.3 2,944,820 - bioH NIAGMN_14770 0.14 -0.4 2,944,820 - bioH NIAGMN_14770 0.14 -3.3 2,945,070 + bioH NIAGMN_14770 0.46 -0.5 2,945,071 - bioH NIAGMN_14770 0.47 +1.5 2,945,125 + bioH NIAGMN_14770 0.54 -1.3 2,945,149 - bioH NIAGMN_14770 0.57 -0.7 2,945,318 + bioH NIAGMN_14770 0.79 -1.8 2,945,318 + bioH NIAGMN_14770 0.79 +0.0 2,945,318 + bioH NIAGMN_14770 0.79 -0.4 2,945,318 + bioH NIAGMN_14770 0.79 +0.0 2,945,319 - bioH NIAGMN_14770 0.79 +0.1 2,945,319 - bioH NIAGMN_14770 0.79 +0.8 2,945,319 - bioH NIAGMN_14770 0.79 -2.8 2,945,319 - bioH NIAGMN_14770 0.79 -0.0 2,945,319 - bioH NIAGMN_14770 0.79 -2.1 2,945,319 - bioH NIAGMN_14770 0.79 -0.6 2,945,368 + bioH NIAGMN_14770 0.85 +0.1 2,945,393 + bioH NIAGMN_14770 0.88 -0.6 2,945,393 + bioH NIAGMN_14770 0.88 -1.1 2,945,393 + bioH NIAGMN_14770 0.88 -0.7 2,945,393 + bioH NIAGMN_14770 0.88 -0.1 2,945,393 + bioH NIAGMN_14770 0.88 -0.8 2,945,393 + bioH NIAGMN_14770 0.88 -0.5 2,945,393 + bioH NIAGMN_14770 0.88 +0.2 2,945,393 + bioH NIAGMN_14770 0.88 -2.3 2,945,393 + bioH NIAGMN_14770 0.88 -0.5 2,945,394 - bioH NIAGMN_14770 0.88 +0.7 2,945,394 - bioH NIAGMN_14770 0.88 -2.4 2,945,394 - bioH NIAGMN_14770 0.88 -0.9 2,945,394 - bioH NIAGMN_14770 0.88 -0.4 2,945,394 - bioH NIAGMN_14770 0.88 -0.4 2,945,394 - bioH NIAGMN_14770 0.88 -0.5 2,945,425 + +0.8 2,945,425 + -1.1 2,945,480 + -0.0 2,945,481 - -0.5 2,945,551 - +0.5 2,945,593 + +0.4 2,945,594 - +0.5 2,945,594 - -1.1 2,945,603 - rpnA NIAGMN_14775 0.11 +0.0 2,945,604 + rpnA NIAGMN_14775 0.11 +0.4 2,945,605 - rpnA NIAGMN_14775 0.11 +0.3 2,945,605 - rpnA NIAGMN_14775 0.11 -0.9 2,945,605 - rpnA NIAGMN_14775 0.11 +1.1 2,945,605 - rpnA NIAGMN_14775 0.11 +0.6 2,945,605 - rpnA NIAGMN_14775 0.11 +0.0 2,945,605 - rpnA NIAGMN_14775 0.11 -0.9 2,945,652 + rpnA NIAGMN_14775 0.16 +0.3 2,945,653 - rpnA NIAGMN_14775 0.16 +0.1 2,945,740 + rpnA NIAGMN_14775 0.26 +2.3 2,945,740 + rpnA NIAGMN_14775 0.26 +0.8 2,945,740 + rpnA NIAGMN_14775 0.26 +0.3 2,945,741 - rpnA NIAGMN_14775 0.26 -0.9 2,945,741 - rpnA NIAGMN_14775 0.26 +1.0 2,945,741 - rpnA NIAGMN_14775 0.26 -0.7 2,945,744 + rpnA NIAGMN_14775 0.27 -1.4 2,945,744 + rpnA NIAGMN_14775 0.27 +0.2 2,945,745 - rpnA NIAGMN_14775 0.27 -0.2 2,945,745 - rpnA NIAGMN_14775 0.27 +0.5 2,945,748 + rpnA NIAGMN_14775 0.27 +0.0 2,945,749 - rpnA NIAGMN_14775 0.27 +0.1 2,945,749 - rpnA NIAGMN_14775 0.27 +0.7 2,945,788 - rpnA NIAGMN_14775 0.32 -1.1 2,945,791 + rpnA NIAGMN_14775 0.32 +0.2 2,945,791 + rpnA NIAGMN_14775 0.32 +0.3 2,945,791 + rpnA NIAGMN_14775 0.32 +0.5 2,945,791 + rpnA NIAGMN_14775 0.32 +0.6 2,945,791 + rpnA NIAGMN_14775 0.32 -2.1 2,945,791 + rpnA NIAGMN_14775 0.32 +0.6 2,945,792 - rpnA NIAGMN_14775 0.32 -0.6 2,945,792 - rpnA NIAGMN_14775 0.32 +0.6 2,945,792 - rpnA NIAGMN_14775 0.32 +0.2 2,945,794 + rpnA NIAGMN_14775 0.32 -0.3 2,945,794 + rpnA NIAGMN_14775 0.32 +1.4 2,945,794 + rpnA NIAGMN_14775 0.32 -2.0 2,945,794 + rpnA NIAGMN_14775 0.32 +0.6 2,945,795 - rpnA NIAGMN_14775 0.33 -1.9 2,945,795 - rpnA NIAGMN_14775 0.33 -0.1 2,945,795 - rpnA NIAGMN_14775 0.33 +1.0 2,945,795 - rpnA NIAGMN_14775 0.33 +0.3 2,945,813 - rpnA NIAGMN_14775 0.35 -0.6 2,945,841 + rpnA NIAGMN_14775 0.38 -3.8 2,945,842 - rpnA NIAGMN_14775 0.38 +1.4 2,945,842 - rpnA NIAGMN_14775 0.38 +0.3 2,945,842 - rpnA NIAGMN_14775 0.38 +0.0 2,945,855 - rpnA NIAGMN_14775 0.39 +0.3 2,945,855 - rpnA NIAGMN_14775 0.39 +0.2 2,945,855 - rpnA NIAGMN_14775 0.39 +0.0 2,945,913 + rpnA NIAGMN_14775 0.46 -0.0 2,945,939 + rpnA NIAGMN_14775 0.49 -0.9 2,945,939 + rpnA NIAGMN_14775 0.49 -0.5 2,945,939 + rpnA NIAGMN_14775 0.49 +0.1 2,945,940 - rpnA NIAGMN_14775 0.49 -0.4 2,945,940 - rpnA NIAGMN_14775 0.49 +0.0 2,945,940 - rpnA NIAGMN_14775 0.49 -0.4 2,945,940 - rpnA NIAGMN_14775 0.49 -1.6 2,945,994 - rpnA NIAGMN_14775 0.55 +0.8 2,946,020 + rpnA NIAGMN_14775 0.58 -1.4 2,946,021 - rpnA NIAGMN_14775 0.58 -1.7 2,946,021 - rpnA NIAGMN_14775 0.58 +0.7 2,946,090 + rpnA NIAGMN_14775 0.66 -1.0 2,946,155 + rpnA NIAGMN_14775 0.73 +0.5 2,946,155 + rpnA NIAGMN_14775 0.73 +0.1 2,946,155 + rpnA NIAGMN_14775 0.73 -1.8 2,946,155 + rpnA NIAGMN_14775 0.73 +0.2 2,946,155 + rpnA NIAGMN_14775 0.73 +0.5 2,946,155 + rpnA NIAGMN_14775 0.73 +0.4 2,946,155 + rpnA NIAGMN_14775 0.73 +0.2 2,946,155 + rpnA NIAGMN_14775 0.73 -0.5 2,946,155 + rpnA NIAGMN_14775 0.73 +0.5 2,946,155 + rpnA NIAGMN_14775 0.73 -0.9 2,946,156 - rpnA NIAGMN_14775 0.74 -0.2 2,946,156 - rpnA NIAGMN_14775 0.74 +0.4 2,946,156 - rpnA NIAGMN_14775 0.74 -0.0 2,946,161 + rpnA NIAGMN_14775 0.74 -0.2 2,946,161 + rpnA NIAGMN_14775 0.74 +0.3 2,946,161 + rpnA NIAGMN_14775 0.74 -0.2 2,946,161 + rpnA NIAGMN_14775 0.74 -1.3 2,946,161 + rpnA NIAGMN_14775 0.74 -1.0 2,946,161 + rpnA NIAGMN_14775 0.74 +0.4 2,946,161 + rpnA NIAGMN_14775 0.74 +0.5 2,946,161 + rpnA NIAGMN_14775 0.74 +1.0 2,946,162 - rpnA NIAGMN_14775 0.74 +2.7 2,946,162 - rpnA NIAGMN_14775 0.74 +0.0 2,946,162 - rpnA NIAGMN_14775 0.74 -0.6 2,946,231 + rpnA NIAGMN_14775 0.82 -0.2 2,946,292 + rpnA NIAGMN_14775 0.89 -0.0 2,946,292 + rpnA NIAGMN_14775 0.89 -0.1 2,946,292 + rpnA NIAGMN_14775 0.89 -0.6 2,946,424 + -0.3 2,946,424 + +0.2 2,946,450 - +0.5
Or see this region's nucleotide sequence