Experiment: D-Glucose
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt yibG and rhsA are separated by 11 nucleotides
NIAGMN_13590: yibG - Uncharacterized protein YibG, at 2,692,146 to 2,692,607
yibG
NIAGMN_13595: rhsA - RHS element protein, at 2,692,619 to 2,696,848
rhsA
Position (kb)
2692
2693 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2691.215 kb on - strand at 2691.274 kb on + strand at 2691.277 kb on + strand at 2691.321 kb on + strand at 2691.394 kb on + strand at 2691.395 kb on - strand at 2691.408 kb on - strand at 2691.639 kb on + strand at 2691.810 kb on - strand at 2691.869 kb on - strand at 2691.902 kb on + strand at 2691.902 kb on + strand at 2691.903 kb on - strand at 2691.925 kb on + strand at 2691.930 kb on - strand at 2691.935 kb on + strand at 2691.935 kb on + strand at 2691.945 kb on - strand at 2692.003 kb on + strand at 2692.003 kb on + strand at 2692.078 kb on + strand at 2692.081 kb on + strand at 2692.082 kb on - strand at 2692.085 kb on + strand at 2692.087 kb on + strand at 2692.087 kb on + strand at 2692.087 kb on + strand at 2692.090 kb on + strand at 2692.090 kb on + strand at 2692.090 kb on + strand at 2692.115 kb on - strand at 2692.115 kb on - strand at 2692.160 kb on + strand at 2692.496 kb on - strand, within yibG at 2692.591 kb on - strand at 2692.626 kb on - strand at 2692.721 kb on - strand at 2692.721 kb on - strand at 2692.727 kb on + strand at 2692.735 kb on + strand at 2692.763 kb on + strand at 2692.836 kb on - strand at 2692.843 kb on + strand at 2692.969 kb on + strand at 2693.048 kb on - strand, within rhsA at 2693.064 kb on - strand, within rhsA at 2693.075 kb on - strand, within rhsA at 2693.099 kb on + strand, within rhsA at 2693.130 kb on - strand, within rhsA at 2693.130 kb on - strand, within rhsA at 2693.197 kb on + strand, within rhsA at 2693.197 kb on + strand, within rhsA at 2693.197 kb on + strand, within rhsA at 2693.199 kb on + strand, within rhsA at 2693.221 kb on - strand, within rhsA at 2693.221 kb on - strand, within rhsA at 2693.224 kb on - strand, within rhsA at 2693.239 kb on - strand, within rhsA at 2693.377 kb on + strand, within rhsA at 2693.378 kb on - strand, within rhsA at 2693.378 kb on - strand, within rhsA at 2693.413 kb on - strand, within rhsA at 2693.413 kb on - strand, within rhsA at 2693.413 kb on - strand, within rhsA
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose remove 2,691,215 - +0.5 2,691,274 + +0.2 2,691,277 + +0.1 2,691,321 + -0.0 2,691,394 + +0.5 2,691,395 - +0.4 2,691,408 - +1.5 2,691,639 + -0.6 2,691,810 - -0.2 2,691,869 - +0.3 2,691,902 + +0.2 2,691,902 + +1.1 2,691,903 - -0.2 2,691,925 + +0.8 2,691,930 - +0.3 2,691,935 + -0.5 2,691,935 + -0.0 2,691,945 - +0.6 2,692,003 + +1.2 2,692,003 + +1.3 2,692,078 + +1.1 2,692,081 + +0.9 2,692,082 - -0.1 2,692,085 + -1.6 2,692,087 + +1.1 2,692,087 + +0.2 2,692,087 + -0.9 2,692,090 + -0.5 2,692,090 + -0.5 2,692,090 + +1.0 2,692,115 - -0.8 2,692,115 - +1.9 2,692,160 + +0.5 2,692,496 - yibG NIAGMN_13590 0.76 +1.6 2,692,591 - +0.4 2,692,626 - +0.6 2,692,721 - +0.2 2,692,721 - -0.3 2,692,727 + +0.2 2,692,735 + -0.7 2,692,763 + -0.7 2,692,836 - +0.4 2,692,843 + -0.8 2,692,969 + -0.2 2,693,048 - rhsA NIAGMN_13595 0.10 +0.3 2,693,064 - rhsA NIAGMN_13595 0.11 +0.2 2,693,075 - rhsA NIAGMN_13595 0.11 +0.3 2,693,099 + rhsA NIAGMN_13595 0.11 +0.1 2,693,130 - rhsA NIAGMN_13595 0.12 -1.1 2,693,130 - rhsA NIAGMN_13595 0.12 +0.1 2,693,197 + rhsA NIAGMN_13595 0.14 +0.8 2,693,197 + rhsA NIAGMN_13595 0.14 +0.6 2,693,197 + rhsA NIAGMN_13595 0.14 +0.3 2,693,199 + rhsA NIAGMN_13595 0.14 +1.2 2,693,221 - rhsA NIAGMN_13595 0.14 +0.0 2,693,221 - rhsA NIAGMN_13595 0.14 +0.7 2,693,224 - rhsA NIAGMN_13595 0.14 +1.1 2,693,239 - rhsA NIAGMN_13595 0.15 +0.6 2,693,377 + rhsA NIAGMN_13595 0.18 -2.5 2,693,378 - rhsA NIAGMN_13595 0.18 +0.4 2,693,378 - rhsA NIAGMN_13595 0.18 +1.1 2,693,413 - rhsA NIAGMN_13595 0.19 +0.8 2,693,413 - rhsA NIAGMN_13595 0.19 +0.8 2,693,413 - rhsA NIAGMN_13595 0.19 -0.4
Or see this region's nucleotide sequence