Strain Fitness in Escherichia coli ECRC102 around NIAGMN_13550

Experiment: D-Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntehaG and NIAGMN_13550 are separated by 43 nucleotidesNIAGMN_13550 and yibL are separated by 644 nucleotides NIAGMN_13545: ehaG - trimeric autotransporter adhesin EhaG, at 2,677,857 to 2,682,623 ehaG NIAGMN_13550: NIAGMN_13550 - DUF3251 domain-containing protein, at 2,682,667 to 2,683,248 _13550 NIAGMN_13555: yibL - YibL family ribosome-associated protein, at 2,683,893 to 2,684,255 yibL Position (kb) 2682 2683 2684Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2681.682 kb on - strand, within ehaGat 2681.724 kb on + strand, within ehaGat 2681.724 kb on + strand, within ehaGat 2681.725 kb on - strand, within ehaGat 2681.725 kb on - strand, within ehaGat 2681.794 kb on - strand, within ehaGat 2681.808 kb on - strand, within ehaGat 2681.808 kb on - strand, within ehaGat 2681.808 kb on - strand, within ehaGat 2681.835 kb on + strand, within ehaGat 2681.836 kb on - strand, within ehaGat 2681.843 kb on + strand, within ehaGat 2681.844 kb on - strand, within ehaGat 2681.846 kb on + strand, within ehaGat 2681.846 kb on + strand, within ehaGat 2681.846 kb on + strand, within ehaGat 2681.847 kb on - strand, within ehaGat 2681.847 kb on - strand, within ehaGat 2681.888 kb on + strand, within ehaGat 2681.888 kb on + strand, within ehaGat 2681.888 kb on + strand, within ehaGat 2681.888 kb on + strand, within ehaGat 2681.888 kb on + strand, within ehaGat 2681.888 kb on + strand, within ehaGat 2681.888 kb on + strand, within ehaGat 2681.889 kb on - strand, within ehaGat 2681.889 kb on - strand, within ehaGat 2681.889 kb on - strand, within ehaGat 2681.889 kb on - strand, within ehaGat 2681.889 kb on - strand, within ehaGat 2681.889 kb on - strand, within ehaGat 2681.889 kb on - strand, within ehaGat 2681.889 kb on - strand, within ehaGat 2681.889 kb on - strand, within ehaGat 2681.891 kb on + strand, within ehaGat 2681.892 kb on - strand, within ehaGat 2681.892 kb on - strand, within ehaGat 2681.913 kb on - strand, within ehaGat 2681.913 kb on - strand, within ehaGat 2681.913 kb on - strand, within ehaGat 2681.921 kb on + strand, within ehaGat 2681.921 kb on + strand, within ehaGat 2681.921 kb on + strand, within ehaGat 2681.922 kb on - strand, within ehaGat 2681.922 kb on - strand, within ehaGat 2681.958 kb on + strand, within ehaGat 2681.959 kb on - strand, within ehaGat 2681.990 kb on + strand, within ehaGat 2681.991 kb on - strand, within ehaGat 2681.991 kb on - strand, within ehaGat 2682.014 kb on - strand, within ehaGat 2682.050 kb on + strand, within ehaGat 2682.050 kb on + strand, within ehaGat 2682.050 kb on + strand, within ehaGat 2682.051 kb on - strand, within ehaGat 2682.072 kb on - strand, within ehaGat 2682.072 kb on - strand, within ehaGat 2682.072 kb on - strand, within ehaGat 2682.129 kb on - strand, within ehaGat 2682.134 kb on + strand, within ehaGat 2682.135 kb on - strand, within ehaGat 2682.135 kb on - strand, within ehaGat 2682.143 kb on + strand, within ehaGat 2682.144 kb on - strand, within ehaGat 2682.144 kb on - strand, within ehaGat 2682.196 kb on + strandat 2682.216 kb on + strandat 2682.218 kb on + strandat 2682.218 kb on + strandat 2682.218 kb on + strandat 2682.218 kb on + strandat 2682.218 kb on + strandat 2682.218 kb on + strandat 2682.218 kb on + strandat 2682.238 kb on - strandat 2682.305 kb on + strandat 2682.305 kb on + strandat 2682.305 kb on + strandat 2682.305 kb on + strandat 2682.305 kb on + strandat 2682.305 kb on + strandat 2682.305 kb on + strandat 2682.305 kb on + strandat 2682.305 kb on + strandat 2682.306 kb on - strandat 2682.306 kb on - strandat 2682.306 kb on - strandat 2682.306 kb on - strandat 2682.306 kb on - strandat 2682.306 kb on - strandat 2682.306 kb on - strandat 2682.306 kb on - strandat 2682.306 kb on - strandat 2682.307 kb on + strandat 2682.308 kb on - strandat 2682.321 kb on + strandat 2682.322 kb on - strandat 2682.332 kb on - strandat 2682.345 kb on - strandat 2682.365 kb on + strandat 2682.366 kb on - strandat 2682.394 kb on - strandat 2682.394 kb on - strandat 2682.395 kb on + strandat 2682.524 kb on + strandat 2682.576 kb on - strandat 2682.577 kb on + strandat 2682.578 kb on - strandat 2682.648 kb on - strandat 2682.854 kb on - strand, within NIAGMN_13550at 2683.124 kb on - strand, within NIAGMN_13550at 2683.186 kb on + strand, within NIAGMN_13550at 2683.690 kb on - strandat 2683.801 kb on + strandat 2683.866 kb on + strandat 2683.866 kb on + strandat 2683.866 kb on + strandat 2683.867 kb on - strandat 2683.895 kb on - strandat 2683.908 kb on - strandat 2683.908 kb on - strandat 2684.072 kb on + strand, within yibLat 2684.073 kb on - strand, within yibLat 2684.073 kb on - strand, within yibLat 2684.152 kb on + strand, within yibLat 2684.152 kb on + strand, within yibLat 2684.152 kb on + strand, within yibLat 2684.153 kb on - strand, within yibL

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose
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2,681,682 - ehaG NIAGMN_13545 0.80 +0.7
2,681,724 + ehaG NIAGMN_13545 0.81 -0.4
2,681,724 + ehaG NIAGMN_13545 0.81 +0.7
2,681,725 - ehaG NIAGMN_13545 0.81 +1.3
2,681,725 - ehaG NIAGMN_13545 0.81 -1.2
2,681,794 - ehaG NIAGMN_13545 0.83 +0.1
2,681,808 - ehaG NIAGMN_13545 0.83 +0.2
2,681,808 - ehaG NIAGMN_13545 0.83 +0.8
2,681,808 - ehaG NIAGMN_13545 0.83 -0.4
2,681,835 + ehaG NIAGMN_13545 0.83 +0.4
2,681,836 - ehaG NIAGMN_13545 0.83 +0.1
2,681,843 + ehaG NIAGMN_13545 0.84 +0.2
2,681,844 - ehaG NIAGMN_13545 0.84 -0.1
2,681,846 + ehaG NIAGMN_13545 0.84 +0.4
2,681,846 + ehaG NIAGMN_13545 0.84 +0.3
2,681,846 + ehaG NIAGMN_13545 0.84 +1.9
2,681,847 - ehaG NIAGMN_13545 0.84 -0.6
2,681,847 - ehaG NIAGMN_13545 0.84 +0.7
2,681,888 + ehaG NIAGMN_13545 0.85 +1.3
2,681,888 + ehaG NIAGMN_13545 0.85 -1.0
2,681,888 + ehaG NIAGMN_13545 0.85 -0.1
2,681,888 + ehaG NIAGMN_13545 0.85 -0.1
2,681,888 + ehaG NIAGMN_13545 0.85 +0.3
2,681,888 + ehaG NIAGMN_13545 0.85 -1.5
2,681,888 + ehaG NIAGMN_13545 0.85 +0.5
2,681,889 - ehaG NIAGMN_13545 0.85 +0.2
2,681,889 - ehaG NIAGMN_13545 0.85 +0.8
2,681,889 - ehaG NIAGMN_13545 0.85 +0.4
2,681,889 - ehaG NIAGMN_13545 0.85 -1.7
2,681,889 - ehaG NIAGMN_13545 0.85 +0.3
2,681,889 - ehaG NIAGMN_13545 0.85 +0.9
2,681,889 - ehaG NIAGMN_13545 0.85 -0.7
2,681,889 - ehaG NIAGMN_13545 0.85 -0.2
2,681,889 - ehaG NIAGMN_13545 0.85 -0.1
2,681,891 + ehaG NIAGMN_13545 0.85 -0.3
2,681,892 - ehaG NIAGMN_13545 0.85 +0.2
2,681,892 - ehaG NIAGMN_13545 0.85 +0.7
2,681,913 - ehaG NIAGMN_13545 0.85 +0.3
2,681,913 - ehaG NIAGMN_13545 0.85 -1.9
2,681,913 - ehaG NIAGMN_13545 0.85 +0.1
2,681,921 + ehaG NIAGMN_13545 0.85 +0.1
2,681,921 + ehaG NIAGMN_13545 0.85 +0.7
2,681,921 + ehaG NIAGMN_13545 0.85 -0.3
2,681,922 - ehaG NIAGMN_13545 0.85 +0.3
2,681,922 - ehaG NIAGMN_13545 0.85 -0.5
2,681,958 + ehaG NIAGMN_13545 0.86 -2.3
2,681,959 - ehaG NIAGMN_13545 0.86 -0.1
2,681,990 + ehaG NIAGMN_13545 0.87 +0.9
2,681,991 - ehaG NIAGMN_13545 0.87 +0.5
2,681,991 - ehaG NIAGMN_13545 0.87 +0.3
2,682,014 - ehaG NIAGMN_13545 0.87 -0.8
2,682,050 + ehaG NIAGMN_13545 0.88 +0.1
2,682,050 + ehaG NIAGMN_13545 0.88 -0.6
2,682,050 + ehaG NIAGMN_13545 0.88 -0.1
2,682,051 - ehaG NIAGMN_13545 0.88 +0.6
2,682,072 - ehaG NIAGMN_13545 0.88 +0.8
2,682,072 - ehaG NIAGMN_13545 0.88 +0.6
2,682,072 - ehaG NIAGMN_13545 0.88 +0.2
2,682,129 - ehaG NIAGMN_13545 0.90 -0.3
2,682,134 + ehaG NIAGMN_13545 0.90 -1.2
2,682,135 - ehaG NIAGMN_13545 0.90 +0.5
2,682,135 - ehaG NIAGMN_13545 0.90 -0.5
2,682,143 + ehaG NIAGMN_13545 0.90 +1.1
2,682,144 - ehaG NIAGMN_13545 0.90 +0.1
2,682,144 - ehaG NIAGMN_13545 0.90 +0.4
2,682,196 + -0.0
2,682,216 + +0.3
2,682,218 + -0.1
2,682,218 + -0.6
2,682,218 + -0.6
2,682,218 + +0.8
2,682,218 + +0.6
2,682,218 + +2.1
2,682,218 + -0.1
2,682,238 - -0.2
2,682,305 + +0.8
2,682,305 + -2.8
2,682,305 + -0.1
2,682,305 + -1.2
2,682,305 + -1.0
2,682,305 + -0.5
2,682,305 + -1.5
2,682,305 + +1.5
2,682,305 + +0.1
2,682,306 - +1.0
2,682,306 - +1.6
2,682,306 - -0.2
2,682,306 - -2.0
2,682,306 - +0.1
2,682,306 - -0.8
2,682,306 - -0.3
2,682,306 - -0.3
2,682,306 - +0.3
2,682,307 + -0.5
2,682,308 - -2.9
2,682,321 + -1.2
2,682,322 - +0.2
2,682,332 - -2.0
2,682,345 - -0.0
2,682,365 + +1.8
2,682,366 - +0.4
2,682,394 - -0.2
2,682,394 - -2.4
2,682,395 + +0.0
2,682,524 + +0.8
2,682,576 - -0.0
2,682,577 + +0.4
2,682,578 - +0.1
2,682,648 - -1.7
2,682,854 - NIAGMN_13550 0.32 -1.5
2,683,124 - NIAGMN_13550 0.79 -0.4
2,683,186 + NIAGMN_13550 0.89 +0.6
2,683,690 - +1.6
2,683,801 + -2.2
2,683,866 + +0.3
2,683,866 + +0.3
2,683,866 + -0.1
2,683,867 - -0.7
2,683,895 - +0.5
2,683,908 - -0.1
2,683,908 - +1.5
2,684,072 + yibL NIAGMN_13555 0.49 +0.1
2,684,073 - yibL NIAGMN_13555 0.50 +0.0
2,684,073 - yibL NIAGMN_13555 0.50 -1.1
2,684,152 + yibL NIAGMN_13555 0.71 +1.2
2,684,152 + yibL NIAGMN_13555 0.71 -0.4
2,684,152 + yibL NIAGMN_13555 0.71 +0.1
2,684,153 - yibL NIAGMN_13555 0.72 +1.0

Or see this region's nucleotide sequence